RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 THSD4Q6ZMP0 1018 aa15.42■□□□□ 0.06
MRPS35-204ENST00000542199 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
MRPS35-204ENST00000542199 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
MRPS35-204ENST00000542199 HRCP23327 699 aa15.41■□□□□ 0.06
MRPS35-204ENST00000542199 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
MRPS35-204ENST00000542199 MCM6Q14566 821 aa15.39■□□□□ 0.05
MRPS35-204ENST00000542199 MORN1Q5T089 497 aa15.39■□□□□ 0.05
MRPS35-204ENST00000542199 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
MRPS35-204ENST00000542199 NUTM2BA6NNL0 878 aaPredicted RBP15.38■□□□□ 0.05
MRPS35-204ENST00000542199 NUTM2EB1AL46 878 aaPredicted RBP15.38■□□□□ 0.05
MRPS35-204ENST00000542199 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
MRPS35-204ENST00000542199 PRPF38BQ5VTL8 546 aaKnown RBP15.38■□□□□ 0.05
MRPS35-204ENST00000542199 NUTM2AQ8IVF1 878 aaPredicted RBP15.38■□□□□ 0.05
MRPS35-204ENST00000542199 FLIIQ13045 1269 aa15.37■□□□□ 0.05
MRPS35-204ENST00000542199 SYMPKQ92797 1274 aaKnown RBP15.37■□□□□ 0.05
MRPS35-204ENST00000542199 PRR14Q9BWN1 585 aa15.36■□□□□ 0.05
MRPS35-204ENST00000542199 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
MRPS35-204ENST00000542199 C6orf229H3BNL8 230 aa15.34■□□□□ 0.05
MRPS35-204ENST00000542199 MTMR2Q13614 643 aa15.34■□□□□ 0.05
MRPS35-204ENST00000542199 SNRKQ9NRH2 765 aa15.33■□□□□ 0.04
MRPS35-204ENST00000542199 PCDHB3Q9Y5E6 796 aa15.32■□□□□ 0.04
MRPS35-204ENST00000542199 AP1G2O75843 785 aa15.31■□□□□ 0.04
MRPS35-204ENST00000542199 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
MRPS35-204ENST00000542199 BLOC1S3Q6QNY0 202 aa15.31■□□□□ 0.04
MRPS35-204ENST00000542199 CFAP99D6REC4 459 aa15.3■□□□□ 0.04
MRPS35-204ENST00000542199 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
MRPS35-204ENST00000542199 PTPN5P54829 565 aa15.28■□□□□ 0.04
MRPS35-204ENST00000542199 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
MRPS35-204ENST00000542199 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 TSC1Q92574 1164 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 ZMYND15Q9H091 742 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
MRPS35-204ENST00000542199 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
MRPS35-204ENST00000542199 COPS2P61201 443 aa15.25■□□□□ 0.03
MRPS35-204ENST00000542199 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
MRPS35-204ENST00000542199 MTMR14Q8NCE2 650 aa15.25■□□□□ 0.03
MRPS35-204ENST00000542199 Q3C1V9 767 aa15.24■□□□□ 0.03
MRPS35-204ENST00000542199 PRR7Q8TB68 274 aa15.24■□□□□ 0.03
MRPS35-204ENST00000542199 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
MRPS35-204ENST00000542199 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
MRPS35-204ENST00000542199 RETREG3Q86VR2 466 aa15.23■□□□□ 0.03
MRPS35-204ENST00000542199 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
MRPS35-204ENST00000542199 NR1I2O75469 434 aa15.22■□□□□ 0.03
MRPS35-204ENST00000542199 BRICD5Q6PL45 260 aa15.22■□□□□ 0.03
MRPS35-204ENST00000542199 THAP11Q96EK4 314 aa15.22■□□□□ 0.03
MRPS35-204ENST00000542199 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
MRPS35-204ENST00000542199 HELBQ8NG08 1087 aaPredicted RBP15.19■□□□□ 0.02
MRPS35-204ENST00000542199 LRRN4Q8WUT4 740 aa15.19■□□□□ 0.02
MRPS35-204ENST00000542199 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
MRPS35-204ENST00000542199 TLL1O43897 1013 aa15.18■□□□□ 0.02
MRPS35-204ENST00000542199 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
MRPS35-204ENST00000542199 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
MRPS35-204ENST00000542199 MTRQ99707 1265 aa15.17■□□□□ 0.02
MRPS35-204ENST00000542199 USB1Q9BQ65 265 aaKnown RBP15.17■□□□□ 0.02
MRPS35-204ENST00000542199 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
MRPS35-204ENST00000542199 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
MRPS35-204ENST00000542199 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
MRPS35-204ENST00000542199 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
MRPS35-204ENST00000542199 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
MRPS35-204ENST00000542199 SPNS2Q8IVW8 549 aa15.15■□□□□ 0.02
MRPS35-204ENST00000542199 GJD4Q96KN9 370 aaPredicted RBP15.13■□□□□ 0.01
MRPS35-204ENST00000542199 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
MRPS35-204ENST00000542199 ZNF516Q92618 1163 aa15.12■□□□□ 0.01
MRPS35-204ENST00000542199 A6NJR5 290 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 ZPR1O75312 459 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 TJAP1Q5JTD0 557 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 FAM160A2Q8N612 972 aaPredicted RBP15.11■□□□□ 0.01
MRPS35-204ENST00000542199 RNF166Q96A37 237 aaPredicted RBP15.11■□□□□ 0.01
MRPS35-204ENST00000542199 SPSB2Q99619 263 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 GDPD2Q9HCC8 539 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 PRDM9Q9NQV7 894 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
MRPS35-204ENST00000542199 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
MRPS35-204ENST00000542199 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
MRPS35-204ENST00000542199 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
MRPS35-204ENST00000542199 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
MRPS35-204ENST00000542199 TBC1D2BQ9UPU7 963 aa15.1■□□□□ 0.01
MRPS35-204ENST00000542199 SOCS7O14512 581 aa15.09■□□□□ 0.01
MRPS35-204ENST00000542199 DESI1Q6ICB0 168 aa15.09■□□□□ 0.01
MRPS35-204ENST00000542199 RAD21O60216 631 aa15.08■□□□□ 0
MRPS35-204ENST00000542199 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
MRPS35-204ENST00000542199 JUNDP17535 347 aa15.07■□□□□ 0
MRPS35-204ENST00000542199 IL21Q9HBE4 155 aa15.07■□□□□ 0
MRPS35-204ENST00000542199 MSS51Q4VC12 460 aa15.06■□□□□ 0
MRPS35-204ENST00000542199 LYPD8Q6UX82 237 aa15.06■□□□□ 0
MRPS35-204ENST00000542199 ADH1BP00325 375 aa15.05■□□□□ -0
MRPS35-204ENST00000542199 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
MRPS35-204ENST00000542199 GPR37L1O60883 481 aa15.04■□□□□ -0
MRPS35-204ENST00000542199 NR6A1Q15406 480 aa15.04■□□□□ -0
MRPS35-204ENST00000542199 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
MRPS35-204ENST00000542199 APBB1O00213 710 aa15.03■□□□□ -0
MRPS35-204ENST00000542199 TRAK2O60296 914 aa15.03■□□□□ -0
MRPS35-204ENST00000542199 ABL2P42684 1182 aa15.03■□□□□ -0
MRPS35-204ENST00000542199 ARID3CA6NKF2 412 aa15.02■□□□□ -0
MRPS35-204ENST00000542199 NKX2-3Q8TAU0 364 aa15.02■□□□□ -0
MRPS35-204ENST00000542199 NDUFB9Q9Y6M9 179 aa15.02■□□□□ -0
MRPS35-204ENST00000542199 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
MRPS35-204ENST00000542199 DXOO77932 396 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms