RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
TRPM1-203ENST00000542188 G3BP1Q13283 466 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRPM1-203ENST00000542188 AAMPQ13685 434 aa16.89■□□□□ 0.29
TRPM1-203ENST00000542188 RBM10P98175 930 aaKnown RBP16.89■□□□□ 0.29
TRPM1-203ENST00000542188 KINO60870 393 aaKnown RBP16.89■□□□□ 0.29
TRPM1-203ENST00000542188 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
TRPM1-203ENST00000542188 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
TRPM1-203ENST00000542188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRPM1-203ENST00000542188 COG6Q9Y2V7 657 aa16.89■□□□□ 0.29
TRPM1-203ENST00000542188 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
TRPM1-203ENST00000542188 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
TRPM1-203ENST00000542188 FOSBP53539 338 aa16.88■□□□□ 0.29
TRPM1-203ENST00000542188 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
TRPM1-203ENST00000542188 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
TRPM1-203ENST00000542188 TRAK2O60296 914 aa16.87■□□□□ 0.29
TRPM1-203ENST00000542188 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
TRPM1-203ENST00000542188 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
TRPM1-203ENST00000542188 GBP2P32456 591 aaPredicted RBP16.87■□□□□ 0.29
TRPM1-203ENST00000542188 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
TRPM1-203ENST00000542188 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
TRPM1-203ENST00000542188 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
TRPM1-203ENST00000542188 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
TRPM1-203ENST00000542188 RRP9O43818 475 aaKnown RBP16.86■□□□□ 0.29
TRPM1-203ENST00000542188 PLIN1O60240 522 aa16.86■□□□□ 0.29
TRPM1-203ENST00000542188 TXLNAP40222 546 aa16.86■□□□□ 0.29
TRPM1-203ENST00000542188 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
TRPM1-203ENST00000542188 DACH1Q9UI36 760 aa16.86■□□□□ 0.29
TRPM1-203ENST00000542188 CDC45O75419 566 aa16.86■□□□□ 0.29
TRPM1-203ENST00000542188 DZIP1LQ8IYY4 767 aaKnown RBP16.86■□□□□ 0.29
TRPM1-203ENST00000542188 GGT6Q6P531 493 aa16.86■□□□□ 0.29
TRPM1-203ENST00000542188 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
TRPM1-203ENST00000542188 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
TRPM1-203ENST00000542188 BCL2L13Q9BXK5 485 aa16.85■□□□□ 0.29
TRPM1-203ENST00000542188 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 PDCL2Q8N4E4 241 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 TAX1BP1Q86VP1 789 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
TRPM1-203ENST00000542188 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
TRPM1-203ENST00000542188 MCM2P49736 904 aa16.83■□□□□ 0.29
TRPM1-203ENST00000542188 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.29
TRPM1-203ENST00000542188 NUP155O75694 1391 aa16.83■□□□□ 0.29
TRPM1-203ENST00000542188 CBFA2T2O43439 604 aa16.83■□□□□ 0.29
TRPM1-203ENST00000542188 CENPHQ9H3R5 247 aa16.83■□□□□ 0.29
TRPM1-203ENST00000542188 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
TRPM1-203ENST00000542188 TEFQ10587 303 aa16.83■□□□□ 0.28
TRPM1-203ENST00000542188 UQCRHLA0A096LP55 91 aa16.82■□□□□ 0.28
TRPM1-203ENST00000542188 UQCRHP07919 91 aa16.82■□□□□ 0.28
TRPM1-203ENST00000542188 PDCP20941 246 aa16.82■□□□□ 0.28
TRPM1-203ENST00000542188 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
TRPM1-203ENST00000542188 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
TRPM1-203ENST00000542188 CCDC91Q7Z6B0 441 aa16.82■□□□□ 0.28
TRPM1-203ENST00000542188 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
TRPM1-203ENST00000542188 FOXD1Q16676 465 aa16.81■□□□□ 0.28
TRPM1-203ENST00000542188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRPM1-203ENST00000542188 SERPINC1P01008 464 aa16.81■□□□□ 0.28
TRPM1-203ENST00000542188 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
TRPM1-203ENST00000542188 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
TRPM1-203ENST00000542188 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
TRPM1-203ENST00000542188 CCDC192P0DO97 292 aa16.8■□□□□ 0.28
TRPM1-203ENST00000542188 BRPF1P55201 1214 aaPredicted RBP16.8■□□□□ 0.28
TRPM1-203ENST00000542188 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
TRPM1-203ENST00000542188 STIM1Q13586 685 aa16.79■□□□□ 0.28
TRPM1-203ENST00000542188 TMEM132AQ24JP5 1023 aa16.79■□□□□ 0.28
TRPM1-203ENST00000542188 COG3Q96JB2 828 aa16.79■□□□□ 0.28
TRPM1-203ENST00000542188 EID1Q9Y6B2 187 aa16.79■□□□□ 0.28
TRPM1-203ENST00000542188 GBP3Q9H0R5 595 aa16.79■□□□□ 0.28
TRPM1-203ENST00000542188 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
TRPM1-203ENST00000542188 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
TRPM1-203ENST00000542188 SPC24Q8NBT2 197 aa16.78■□□□□ 0.28
TRPM1-203ENST00000542188 CCDC102AQ96A19 550 aa16.78■□□□□ 0.28
TRPM1-203ENST00000542188 FAM193AP78312 1265 aa16.77■□□□□ 0.28
TRPM1-203ENST00000542188 KRT18P05783 430 aaKnown RBP16.77■□□□□ 0.28
TRPM1-203ENST00000542188 NF2P35240 595 aa16.77■□□□□ 0.28
TRPM1-203ENST00000542188 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.27
TRPM1-203ENST00000542188 DDX11Q96FC9 970 aa16.77■□□□□ 0.27
TRPM1-203ENST00000542188 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
TRPM1-203ENST00000542188 STAMBPO95630 424 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 EIF2S2P20042 333 aaKnown RBP16.76■□□□□ 0.27
TRPM1-203ENST00000542188 FAM107BQ9H098 131 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 PDCL3Q9H2J4 239 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
TRPM1-203ENST00000542188 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 HIP1O00291 1037 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 MAP2K1Q02750 393 aaPredicted RBP16.75■□□□□ 0.27
TRPM1-203ENST00000542188 STK38Q15208 465 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 JAKMIP3Q5VZ66 844 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 PANK3Q9H999 370 aa16.75■□□□□ 0.27
TRPM1-203ENST00000542188 DESP17661 470 aa16.74■□□□□ 0.27
TRPM1-203ENST00000542188 MICALCLQ6ZW33 695 aa16.74■□□□□ 0.27
TRPM1-203ENST00000542188 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
TRPM1-203ENST00000542188 DHX37Q8IY37 1157 aaKnown RBP16.74■□□□□ 0.27
TRPM1-203ENST00000542188 SPATA24Q86W54 205 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 CEP63Q96MT8 703 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms