RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LAPTM4BQ86VI4 370 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 ZNF687Q8N1G0 1237 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 FAM43AQ8N2R8 423 aa5.86□□□□□ -1.47
SNHG1-219ENST00000542112 SWT1Q5T5J6 900 aaKnown RBP5.85□□□□□ -1.47
SNHG1-219ENST00000542112 PRPF38BQ5VTL8 546 aaKnown RBP5.85□□□□□ -1.47
SNHG1-219ENST00000542112 DMRTA1Q5VZB9 504 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 POTEEQ6S8J3 1075 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 NBPF3Q9H094 633 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 VPS9D1Q9Y2B5 631 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 WIZO95785 1651 aa5.85□□□□□ -1.47
SNHG1-219ENST00000542112 WASHC2AQ641Q2 1341 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 APBB1O00213 710 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 SOCS7O14512 581 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 TRAK2O60296 914 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 LILRB3O75022 631 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 HMGB1P09429 215 aaKnown RBP5.84□□□□□ -1.47
SNHG1-219ENST00000542112 NDUFV2P19404 249 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 GRIPAP1Q4V328 841 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 CLUAP1Q96AJ1 413 aa5.84□□□□□ -1.47
SNHG1-219ENST00000542112 NAP1L5Q96NT1 182 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-219ENST00000542112 SEPT9Q9UHD8 586 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-219ENST00000542112 NOP58Q9Y2X3 529 aaKnown RBP5.84□□□□□ -1.47
SNHG1-219ENST00000542112 TK2O00142 265 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 HOXA2O43364 376 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 SLC10A3P09131 477 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 CSPP1Q1MSJ5 1256 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 NECTIN2Q92692 538 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 AXIN2Q9Y2T1 843 aa5.83□□□□□ -1.48
SNHG1-219ENST00000542112 BAZ1AQ9NRL2 1556 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-219ENST00000542112 ARID4BQ4LE39 1312 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 FAM205CA6NFA0 338 aa5.82□□□□□ -1.48
SNHG1-219ENST00000542112 NUTM2BA6NNL0 878 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 NUTM2EB1AL46 878 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 FDX1P10109 184 aa5.82□□□□□ -1.48
SNHG1-219ENST00000542112 CALD1Q05682 793 aaKnown RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 NUTM2DQ5VT03 806 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 PROSER2Q86WR7 435 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 NUTM2AQ8IVF1 878 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-219ENST00000542112 ZBTB3Q9H5J0 574 aa5.82□□□□□ -1.48
SNHG1-219ENST00000542112 PRM3Q9NNZ6 103 aa5.82□□□□□ -1.48
SNHG1-219ENST00000542112 PCDHB15Q9Y5E8 787 aa5.82□□□□□ -1.48
SNHG1-219ENST00000542112 PEG3Q9GZU2 1588 aa5.81□□□□□ -1.48
SNHG1-219ENST00000542112 BHMG1C9JSJ3 638 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-219ENST00000542112 HSP90AA2PQ14568 343 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-219ENST00000542112 QPCTQ16769 361 aa5.81□□□□□ -1.48
SNHG1-219ENST00000542112 FBXO31Q5XUX0 539 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-219ENST00000542112 SAMD7Q7Z3H4 446 aa5.81□□□□□ -1.48
SNHG1-219ENST00000542112 IPO4Q8TEX9 1081 aaKnown RBP5.81□□□□□ -1.48
SNHG1-219ENST00000542112 MARVELD3Q96A59 401 aa5.81□□□□□ -1.48
SNHG1-219ENST00000542112 SNRKQ9NRH2 765 aa5.81□□□□□ -1.48
SNHG1-219ENST00000542112 WWC1Q8IX03 1113 aa5.8□□□□□ -1.48
SNHG1-219ENST00000542112 MRPL50Q8N5N7 158 aaKnown RBP5.8□□□□□ -1.48
SNHG1-219ENST00000542112 POM121Q96HA1 1249 aa5.8□□□□□ -1.48
SNHG1-219ENST00000542112 COG6Q9Y2V7 657 aa5.8□□□□□ -1.48
SNHG1-219ENST00000542112 A0A0U1RQG5 324 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-219ENST00000542112 ARID3CA6NKF2 412 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 AP1G2O75843 785 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 CFHP08603 1231 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 CDK11BP21127 795 aaKnown RBP5.79□□□□□ -1.48
SNHG1-219ENST00000542112 KMT5BQ4FZB7 885 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 FNBP4Q8N3X1 1017 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-219ENST00000542112 MTMR14Q8NCE2 650 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 ZFRQ96KR1 1074 aaKnown RBP5.79□□□□□ -1.48
SNHG1-219ENST00000542112 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 C1orf115Q9H7X2 142 aa5.79□□□□□ -1.48
SNHG1-219ENST00000542112 PPM1GO15355 546 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-219ENST00000542112 ATP6V1AP38606 617 aa5.78□□□□□ -1.48
SNHG1-219ENST00000542112 MTMR2Q13614 643 aa5.78□□□□□ -1.48
SNHG1-219ENST00000542112 CNGB1Q14028 1251 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-219ENST00000542112 CABLES1Q8TDN4 633 aa5.78□□□□□ -1.48
SNHG1-219ENST00000542112 ANP32BQ92688 251 aaKnown RBP5.78□□□□□ -1.48
SNHG1-219ENST00000542112 FAM163AQ96GL9 167 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-219ENST00000542112 LRCH3Q96II8 777 aa5.78□□□□□ -1.48
SNHG1-219ENST00000542112 PRR14Q9BWN1 585 aa5.78□□□□□ -1.48
SNHG1-219ENST00000542112 RNF40O75150 1001 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 HSP90AA1P07900 732 aaKnown RBP5.77□□□□□ -1.49
SNHG1-219ENST00000542112 USP17L8P0C7I0 530 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 ANP32AP39687 249 aaKnown RBP5.77□□□□□ -1.49
SNHG1-219ENST00000542112 LSM11P83369 360 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■□□□□ 9.9
SNHG1-219ENST00000542112 FUT2Q10981 343 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 ADGRD1Q6QNK2 874 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 HELBQ8NG08 1087 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-219ENST00000542112 CHMP4AQ9BY43 222 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 PCDHGC3Q9UN70 934 aa5.77□□□□□ -1.49
SNHG1-219ENST00000542112 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
SNHG1-219ENST00000542112 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
SNHG1-219ENST00000542112 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-219ENST00000542112 NAP1L2Q9ULW6 460 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-219ENST00000542112 EIF4G1Q04637 1599 aaKnown RBP5.76□□□□□ -1.49
SNHG1-219ENST00000542112 TOP2AP11388 1531 aaKnown RBP5.75□□□□□ -1.49
SNHG1-219ENST00000542112 C6orf229H3BNL8 230 aa5.75□□□□□ -1.49
SNHG1-219ENST00000542112 HRO43593 1189 aa5.75□□□□□ -1.49
SNHG1-219ENST00000542112 ACTN4O43707 911 aaKnown RBP5.75□□□□□ -1.49
SNHG1-219ENST00000542112 CANXP27824 592 aaKnown RBP5.75□□□□□ -1.49
SNHG1-219ENST00000542112 ANKK1Q8NFD2 765 aa5.75□□□□□ -1.49
SNHG1-219ENST00000542112 HLA-CQ95604 372 aa5.75□□□□□ -1.49
SNHG1-219ENST00000542112 GDPD2Q9HCC8 539 aa5.75□□□□□ -1.49
SNHG1-219ENST00000542112 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms