RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
RPAIN-205ENST00000536255 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
RPAIN-205ENST00000536255 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
RPAIN-205ENST00000536255 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
RPAIN-205ENST00000536255 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-205ENST00000536255 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-205ENST00000536255 COL16A1Q07092 1604 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-205ENST00000536255 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
RPAIN-205ENST00000536255 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
RPAIN-205ENST00000536255 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
RPAIN-205ENST00000536255 TRAK1Q9UPV9 953 aa19.44■□□□□ 0.7
RPAIN-205ENST00000536255 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
RPAIN-205ENST00000536255 JCADQ9P266 1359 aa19.43■□□□□ 0.7
RPAIN-205ENST00000536255 POGKQ9P215 609 aa19.42■□□□□ 0.7
RPAIN-205ENST00000536255 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
RPAIN-205ENST00000536255 SAFB2Q14151 953 aaKnown RBP eCLIP19.41■□□□□ 0.7
RPAIN-205ENST00000536255 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
RPAIN-205ENST00000536255 FMN2Q9NZ56 1722 aa19.39■□□□□ 0.7
RPAIN-205ENST00000536255 ADGRB2O60241 1585 aa19.38■□□□□ 0.69
RPAIN-205ENST00000536255 DDX17Q92841 729 aaKnown RBP19.38■□□□□ 0.69
RPAIN-205ENST00000536255 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
RPAIN-205ENST00000536255 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
RPAIN-205ENST00000536255 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
RPAIN-205ENST00000536255 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
RPAIN-205ENST00000536255 ARHGEF28Q8N1W1 1705 aaKnown RBP19.37■□□□□ 0.69
RPAIN-205ENST00000536255 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
RPAIN-205ENST00000536255 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
RPAIN-205ENST00000536255 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
RPAIN-205ENST00000536255 LRRC59Q96AG4 307 aaKnown RBP19.34■□□□□ 0.69
RPAIN-205ENST00000536255 MINK1Q8N4C8 1332 aaPredicted RBP19.33■□□□□ 0.69
RPAIN-205ENST00000536255 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
RPAIN-205ENST00000536255 SOS2Q07890 1332 aaPredicted RBP19.32■□□□□ 0.68
RPAIN-205ENST00000536255 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
RPAIN-205ENST00000536255 ANKARQ7Z5J8 1434 aa19.32■□□□□ 0.68
RPAIN-205ENST00000536255 TRPM1Q7Z4N2 1603 aa19.32■□□□□ 0.68
RPAIN-205ENST00000536255 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
RPAIN-205ENST00000536255 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
RPAIN-205ENST00000536255 PNPLA6Q8IY17 1366 aa19.3■□□□□ 0.68
RPAIN-205ENST00000536255 LRP6O75581 1613 aa19.29■□□□□ 0.68
RPAIN-205ENST00000536255 PXDNQ92626 1479 aa19.29■□□□□ 0.68
RPAIN-205ENST00000536255 FOXO3O43524 673 aa19.29■□□□□ 0.68
RPAIN-205ENST00000536255 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
RPAIN-205ENST00000536255 WASLO00401 505 aaPredicted RBP19.28■□□□□ 0.68
RPAIN-205ENST00000536255 ILDR2Q71H61 639 aa19.28■□□□□ 0.68
RPAIN-205ENST00000536255 TULP4Q9NRJ4 1543 aa19.28■□□□□ 0.68
RPAIN-205ENST00000536255 ROCK2O75116 1388 aaKnown RBP19.28■□□□□ 0.68
RPAIN-205ENST00000536255 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
RPAIN-205ENST00000536255 PHF8Q9UPP1 1060 aa19.27■□□□□ 0.68
RPAIN-205ENST00000536255 RGPD8O14715 1765 aaPredicted RBP19.26■□□□□ 0.67
RPAIN-205ENST00000536255 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
RPAIN-205ENST00000536255 XPCQ01831 940 aaPredicted RBP19.25■□□□□ 0.67
RPAIN-205ENST00000536255 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
RPAIN-205ENST00000536255 GPRASP1Q5JY77 1395 aa19.23■□□□□ 0.67
RPAIN-205ENST00000536255 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-205ENST00000536255 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-205ENST00000536255 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
RPAIN-205ENST00000536255 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-205ENST00000536255 RGS17Q9UGC6 210 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-205ENST00000536255 ATP7BP35670 1465 aa19.22■□□□□ 0.67
RPAIN-205ENST00000536255 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
RPAIN-205ENST00000536255 KRT28Q7Z3Y7 464 aa19.21■□□□□ 0.67
RPAIN-205ENST00000536255 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
RPAIN-205ENST00000536255 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
RPAIN-205ENST00000536255 COL22A1Q8NFW1 1626 aaPredicted RBP19.21■□□□□ 0.67
RPAIN-205ENST00000536255 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
RPAIN-205ENST00000536255 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
RPAIN-205ENST00000536255 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
RPAIN-205ENST00000536255 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
RPAIN-205ENST00000536255 PSME1Q06323 249 aa19.18■□□□□ 0.66
RPAIN-205ENST00000536255 ITSN1Q15811 1721 aa19.17■□□□□ 0.66
RPAIN-205ENST00000536255 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
RPAIN-205ENST00000536255 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
RPAIN-205ENST00000536255 TOPAZ1Q8N9V7 1692 aa19.15■□□□□ 0.66
RPAIN-205ENST00000536255 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
RPAIN-205ENST00000536255 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
RPAIN-205ENST00000536255 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
RPAIN-205ENST00000536255 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
RPAIN-205ENST00000536255 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
RPAIN-205ENST00000536255 C8orf37Q96NL8 207 aa19.13■□□□□ 0.65
RPAIN-205ENST00000536255 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
RPAIN-205ENST00000536255 EVC2Q86UK5 1308 aa19.12■□□□□ 0.65
RPAIN-205ENST00000536255 ZNF772Q68DY9 489 aaPredicted RBP19.12■□□□□ 0.65
RPAIN-205ENST00000536255 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
RPAIN-205ENST00000536255 TRPM3Q9HCF6 1732 aaPredicted RBP19.11■□□□□ 0.65
RPAIN-205ENST00000536255 AFF2P51816 1311 aa19.11■□□□□ 0.65
RPAIN-205ENST00000536255 POLR3AO14802 1390 aaPredicted RBP19.1■□□□□ 0.65
RPAIN-205ENST00000536255 SBNO2Q9Y2G9 1366 aa19.1■□□□□ 0.65
RPAIN-205ENST00000536255 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
RPAIN-205ENST00000536255 LMOD2Q6P5Q4 547 aa19.1■□□□□ 0.65
RPAIN-205ENST00000536255 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
RPAIN-205ENST00000536255 ACEP12821 1306 aa19.08■□□□□ 0.65
RPAIN-205ENST00000536255 SOCS7O14512 581 aa19.08■□□□□ 0.64
RPAIN-205ENST00000536255 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
RPAIN-205ENST00000536255 ALS2Q96Q42 1657 aa19.08■□□□□ 0.64
RPAIN-205ENST00000536255 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
RPAIN-205ENST00000536255 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
RPAIN-205ENST00000536255 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
RPAIN-205ENST00000536255 CABLES1Q8TDN4 633 aa19.04■□□□□ 0.64
RPAIN-205ENST00000536255 MARF1Q9Y4F3 1742 aaKnown RBP19.04■□□□□ 0.64
RPAIN-205ENST00000536255 USP47Q96K76 1375 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms