RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 ATF3P18847 181 aa12.15□□□□□ -0.46
LINC00958-207ENST00000534477 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
LINC00958-207ENST00000534477 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
LINC00958-207ENST00000534477 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
LINC00958-207ENST00000534477 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
LINC00958-207ENST00000534477 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
LINC00958-207ENST00000534477 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
LINC00958-207ENST00000534477 TRPM2O94759 1503 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 JCADQ9P266 1359 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
LINC00958-207ENST00000534477 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
LINC00958-207ENST00000534477 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-207ENST00000534477 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-207ENST00000534477 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00958-207ENST00000534477 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
LINC00958-207ENST00000534477 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-207ENST00000534477 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-207ENST00000534477 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
LINC00958-207ENST00000534477 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
LINC00958-207ENST00000534477 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
LINC00958-207ENST00000534477 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
LINC00958-207ENST00000534477 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
LINC00958-207ENST00000534477 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
LINC00958-207ENST00000534477 PIK3R4Q99570 1358 aa12.07□□□□□ -0.48
LINC00958-207ENST00000534477 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
LINC00958-207ENST00000534477 CLTCL1P53675 1640 aa12.06□□□□□ -0.48
LINC00958-207ENST00000534477 NCOA3Q9Y6Q9 1424 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 LRP6O75581 1613 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 NRXN3Q9Y4C0 1643 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 BRINP3Q76B58 766 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 METP08581 1390 aa12.05□□□□□ -0.48
LINC00958-207ENST00000534477 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
LINC00958-207ENST00000534477 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
LINC00958-207ENST00000534477 KIF1BO60333 1816 aa12.04□□□□□ -0.48
LINC00958-207ENST00000534477 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
LINC00958-207ENST00000534477 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
LINC00958-207ENST00000534477 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
LINC00958-207ENST00000534477 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
LINC00958-207ENST00000534477 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
LINC00958-207ENST00000534477 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
LINC00958-207ENST00000534477 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
LINC00958-207ENST00000534477 NAIPQ13075 1403 aa12.02□□□□□ -0.49
LINC00958-207ENST00000534477 NEXMIFQ5QGS0 1516 aa12.01□□□□□ -0.49
LINC00958-207ENST00000534477 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
LINC00958-207ENST00000534477 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
LINC00958-207ENST00000534477 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
LINC00958-207ENST00000534477 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
LINC00958-207ENST00000534477 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
LINC00958-207ENST00000534477 MST1RQ04912 1400 aa12□□□□□ -0.49
LINC00958-207ENST00000534477 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
LINC00958-207ENST00000534477 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
LINC00958-207ENST00000534477 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
LINC00958-207ENST00000534477 DCCP43146 1447 aa11.99□□□□□ -0.49
LINC00958-207ENST00000534477 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
LINC00958-207ENST00000534477 AFF2P51816 1311 aa11.98□□□□□ -0.49
LINC00958-207ENST00000534477 ADAMTS2O95450 1211 aa11.98□□□□□ -0.49
LINC00958-207ENST00000534477 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
LINC00958-207ENST00000534477 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
LINC00958-207ENST00000534477 RXRBP28702 533 aa11.97□□□□□ -0.49
LINC00958-207ENST00000534477 NHSL1Q5SYE7 1610 aa11.97□□□□□ -0.49
LINC00958-207ENST00000534477 RGL3Q3MIN7 710 aa11.96□□□□□ -0.49
LINC00958-207ENST00000534477 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
LINC00958-207ENST00000534477 STK26Q9P289 416 aa11.96□□□□□ -0.49
LINC00958-207ENST00000534477 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
LINC00958-207ENST00000534477 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
LINC00958-207ENST00000534477 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
LINC00958-207ENST00000534477 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 PYGBP11216 843 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 C1orf167Q5SNV9 1468 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
LINC00958-207ENST00000534477 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
LINC00958-207ENST00000534477 NGLY1Q96IV0 654 aa11.93□□□□□ -0.5
LINC00958-207ENST00000534477 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
LINC00958-207ENST00000534477 PPLO60437 1756 aa11.92□□□□□ -0.5
LINC00958-207ENST00000534477 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
LINC00958-207ENST00000534477 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
LINC00958-207ENST00000534477 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00958-207ENST00000534477 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
LINC00958-207ENST00000534477 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
LINC00958-207ENST00000534477 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
LINC00958-207ENST00000534477 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
LINC00958-207ENST00000534477 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
LINC00958-207ENST00000534477 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
LINC00958-207ENST00000534477 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
LINC00958-207ENST00000534477 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
LINC00958-207ENST00000534477 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
LINC00958-207ENST00000534477 RGS12O14924 1447 aa11.88□□□□□ -0.51
LINC00958-207ENST00000534477 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
LINC00958-207ENST00000534477 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
LINC00958-207ENST00000534477 USP21Q9UK80 565 aa11.88□□□□□ -0.51
LINC00958-207ENST00000534477 STK25O00506 426 aa11.87□□□□□ -0.51
LINC00958-207ENST00000534477 FOXO3O43524 673 aa11.87□□□□□ -0.51
LINC00958-207ENST00000534477 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
LINC00958-207ENST00000534477 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms