RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ATP7AQ04656 1500 aa24.81■■□□□ 1.56
CAPN1-226ENST00000533820 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
CAPN1-226ENST00000533820 RARSP54136 660 aaKnown RBP24.8■■□□□ 1.56
CAPN1-226ENST00000533820 PCDHB15Q9Y5E8 787 aa24.8■■□□□ 1.56
CAPN1-226ENST00000533820 RUNDC1Q96C34 613 aa24.8■■□□□ 1.56
CAPN1-226ENST00000533820 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
CAPN1-226ENST00000533820 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
CAPN1-226ENST00000533820 TET3O43151 1660 aa24.78■■□□□ 1.56
CAPN1-226ENST00000533820 U2AF1L5P0DN76 240 aaPredicted RBP24.78■■□□□ 1.56
CAPN1-226ENST00000533820 U2AF1Q01081 240 aaKnown RBP eCLIP24.78■■□□□ 1.56
CAPN1-226ENST00000533820 USP19O94966 1318 aa24.77■■□□□ 1.56
CAPN1-226ENST00000533820 A0A0U1RQG5 324 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-226ENST00000533820 SPRYD3Q8NCJ5 442 aa24.75■■□□□ 1.55
CAPN1-226ENST00000533820 POLR3AO14802 1390 aaPredicted RBP24.75■■□□□ 1.55
CAPN1-226ENST00000533820 MAP3K4Q9Y6R4 1608 aa24.75■■□□□ 1.55
CAPN1-226ENST00000533820 TSR2Q969E8 191 aaKnown RBP24.73■■□□□ 1.55
CAPN1-226ENST00000533820 CABP2Q9NPB3 220 aa24.73■■□□□ 1.55
CAPN1-226ENST00000533820 STK26Q9P289 416 aa24.72■■□□□ 1.55
CAPN1-226ENST00000533820 PDZRN3Q9UPQ7 1066 aa24.72■■□□□ 1.55
CAPN1-226ENST00000533820 U2SURPO15042 1029 aaKnown RBP24.71■■□□□ 1.55
CAPN1-226ENST00000533820 MAPK8IP3Q9UPT6 1336 aa24.71■■□□□ 1.55
CAPN1-226ENST00000533820 CFAP53Q96M91 514 aa24.7■■□□□ 1.55
CAPN1-226ENST00000533820 ARXQ96QS3 562 aa24.7■■□□□ 1.54
CAPN1-226ENST00000533820 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
CAPN1-226ENST00000533820 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
CAPN1-226ENST00000533820 NGEFQ8N5V2 710 aa24.68■■□□□ 1.54
CAPN1-226ENST00000533820 C14orf93Q9H972 538 aaKnown RBP24.67■■□□□ 1.54
CAPN1-226ENST00000533820 MYOM2P54296 1465 aa24.67■■□□□ 1.54
CAPN1-226ENST00000533820 MROH2AA6NES4 1674 aa24.67■■□□□ 1.54
CAPN1-226ENST00000533820 KIF1BO60333 1816 aa24.66■■□□□ 1.54
CAPN1-226ENST00000533820 FTSJ3Q8IY81 847 aaKnown RBP24.66■■□□□ 1.54
CAPN1-226ENST00000533820 PMFBP1Q8TBY8 1022 aa24.66■■□□□ 1.54
CAPN1-226ENST00000533820 POGKQ9P215 609 aa24.65■■□□□ 1.54
CAPN1-226ENST00000533820 GGNBP2Q9H3C7 697 aa24.65■■□□□ 1.54
CAPN1-226ENST00000533820 VWDEQ8N2E2 1590 aa24.64■■□□□ 1.54
CAPN1-226ENST00000533820 INO80Q9ULG1 1556 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-226ENST00000533820 BECN1Q14457 450 aa24.64■■□□□ 1.53
CAPN1-226ENST00000533820 MROH1Q8NDA8 1641 aa24.63■■□□□ 1.53
CAPN1-226ENST00000533820 UPF2Q9HAU5 1272 aaKnown RBP24.63■■□□□ 1.53
CAPN1-226ENST00000533820 KIAA1210Q9ULL0 1709 aa24.63■■□□□ 1.53
CAPN1-226ENST00000533820 WDR63Q8IWG1 891 aa24.63■■□□□ 1.53
CAPN1-226ENST00000533820 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
CAPN1-226ENST00000533820 SMC4Q9NTJ3 1288 aa24.61■■□□□ 1.53
CAPN1-226ENST00000533820 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
CAPN1-226ENST00000533820 PPRC1Q5VV67 1664 aaKnown RBP24.61■■□□□ 1.53
CAPN1-226ENST00000533820 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
CAPN1-226ENST00000533820 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
CAPN1-226ENST00000533820 EXOSC9Q06265 439 aaKnown RBP24.6■■□□□ 1.53
CAPN1-226ENST00000533820 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
CAPN1-226ENST00000533820 NINLQ9Y2I6 1382 aa24.59■■□□□ 1.53
CAPN1-226ENST00000533820 NPATQ14207 1427 aa24.59■■□□□ 1.53
CAPN1-226ENST00000533820 ITPRIPQ8IWB1 547 aa24.58■■□□□ 1.53
CAPN1-226ENST00000533820 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
CAPN1-226ENST00000533820 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
CAPN1-226ENST00000533820 EVC2Q86UK5 1308 aa24.58■■□□□ 1.53
CAPN1-226ENST00000533820 ZKSCAN2Q63HK3 967 aa24.58■■□□□ 1.52
CAPN1-226ENST00000533820 DZIP1LQ8IYY4 767 aaKnown RBP24.58■■□□□ 1.52
CAPN1-226ENST00000533820 MVPQ14764 893 aaKnown RBP24.57■■□□□ 1.52
CAPN1-226ENST00000533820 SHPRHQ149N8 1683 aa24.57■■□□□ 1.52
CAPN1-226ENST00000533820 MFAP1P55081 439 aaKnown RBP24.57■■□□□ 1.52
CAPN1-226ENST00000533820 TBC1D2Q9BYX2 928 aa24.55■■□□□ 1.52
CAPN1-226ENST00000533820 ARAP3Q8WWN8 1544 aa24.55■■□□□ 1.52
CAPN1-226ENST00000533820 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
CAPN1-226ENST00000533820 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
CAPN1-226ENST00000533820 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-226ENST00000533820 ZNF518AQ6AHZ1 1483 aa24.54■■□□□ 1.52
CAPN1-226ENST00000533820 SSH1Q8WYL5 1049 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 TBC1D32Q96NH3 1257 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 FBLN1P23142 703 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 FAM43AQ8N2R8 423 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 QRICH2Q9H0J4 1663 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 TRIM27P14373 513 aa24.53■■□□□ 1.52
CAPN1-226ENST00000533820 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
CAPN1-226ENST00000533820 NRXN1Q9ULB1 1477 aa24.52■■□□□ 1.52
CAPN1-226ENST00000533820 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
CAPN1-226ENST00000533820 KIDINS220Q9ULH0 1771 aa24.51■■□□□ 1.51
CAPN1-226ENST00000533820 GZF1Q9H116 711 aaPredicted RBP24.5■■□□□ 1.51
CAPN1-226ENST00000533820 TMPOP42166 694 aaKnown RBP24.5■■□□□ 1.51
CAPN1-226ENST00000533820 NLRP1Q9C000 1473 aa24.5■■□□□ 1.51
CAPN1-226ENST00000533820 HSP90AA2PQ14568 343 aaPredicted RBP24.5■■□□□ 1.51
CAPN1-226ENST00000533820 NOB1Q9ULX3 412 aaKnown RBP24.5■■□□□ 1.51
CAPN1-226ENST00000533820 ADGRB3O60242 1522 aa24.5■■□□□ 1.51
CAPN1-226ENST00000533820 CCDC27Q2M243 656 aa24.49■■□□□ 1.51
CAPN1-226ENST00000533820 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
CAPN1-226ENST00000533820 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
CAPN1-226ENST00000533820 RIPK4P57078 832 aa24.48■■□□□ 1.51
CAPN1-226ENST00000533820 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
CAPN1-226ENST00000533820 TRIM35Q9UPQ4 493 aa24.47■■□□□ 1.51
CAPN1-226ENST00000533820 ADGRB1O14514 1584 aa24.47■■□□□ 1.51
CAPN1-226ENST00000533820 IDI1Q13907 227 aa24.46■■□□□ 1.51
CAPN1-226ENST00000533820 ANTXR1Q9H6X2 564 aa24.46■■□□□ 1.51
CAPN1-226ENST00000533820 A0A1W2PP64 1363 aa24.46■■□□□ 1.51
CAPN1-226ENST00000533820 TMEM57Q8N5G2 664 aa24.46■■□□□ 1.51
CAPN1-226ENST00000533820 MYO3AQ8NEV4 1616 aa24.45■■□□□ 1.51
CAPN1-226ENST00000533820 C22orf23Q9BZE7 217 aa24.44■■□□□ 1.5
CAPN1-226ENST00000533820 RBM10P98175 930 aaKnown RBP24.44■■□□□ 1.5
CAPN1-226ENST00000533820 ATF7IPQ6VMQ6 1270 aa24.43■■□□□ 1.5
CAPN1-226ENST00000533820 VIRMAQ69YN4 1812 aaKnown RBP24.43■■□□□ 1.5
CAPN1-226ENST00000533820 NAP1L5Q96NT1 182 aaPredicted RBP24.43■■□□□ 1.5
CAPN1-226ENST00000533820 PRAM1Q96QH2 718 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms