RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	ZPR1	O75312	459 aa		13.46	□□□□□ -0.25
PPP6R3-223	ENST00000531432	THAP11	Q96EK4	314 aa		13.46	□□□□□ -0.25
PPP6R3-223	ENST00000531432	TLL1	O43897	1013 aa		13.45	□□□□□ -0.26
PPP6R3-223	ENST00000531432	ITGBL1	O95965	494 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP6R3-223	ENST00000531432	QPCT	Q16769	361 aa		13.45	□□□□□ -0.26
PPP6R3-223	ENST00000531432	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.45	□□□□□ -0.26
PPP6R3-223	ENST00000531432	CABLES1	Q8TDN4	633 aa		13.45	□□□□□ -0.26
PPP6R3-223	ENST00000531432	BRICD5	Q6PL45	260 aa		13.44	□□□□□ -0.26
PPP6R3-223	ENST00000531432	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.44	□□□□□ -0.26
PPP6R3-223	ENST00000531432		Q3C1V9	767 aa		13.43	□□□□□ -0.26
PPP6R3-223	ENST00000531432	C6orf229	H3BNL8	230 aa		13.42	□□□□□ -0.26
PPP6R3-223	ENST00000531432	LILRB3	O75022	631 aa		13.42	□□□□□ -0.26
PPP6R3-223	ENST00000531432	FMNL1	O95466	1100 aa	Predicted RBP	13.42	□□□□□ -0.26
PPP6R3-223	ENST00000531432	HRC	P23327	699 aa		13.42	□□□□□ -0.26
PPP6R3-223	ENST00000531432	SALL2	Q9Y467	1007 aa	Predicted RBP	13.42	□□□□□ -0.26
PPP6R3-223	ENST00000531432	MTMR2	Q13614	643 aa		13.41	□□□□□ -0.26
PPP6R3-223	ENST00000531432	PRPF38B	Q5VTL8	546 aa	Known RBP	13.41	□□□□□ -0.26
PPP6R3-223	ENST00000531432	NKX2-3	Q8TAU0	364 aa		13.41	□□□□□ -0.26
PPP6R3-223	ENST00000531432	ZBTB3	Q9H5J0	574 aa		13.41	□□□□□ -0.26
PPP6R3-223	ENST00000531432	KCNC4	Q03721	635 aa		13.4	□□□□□ -0.26
PPP6R3-223	ENST00000531432	RTL5	Q5HYW3	569 aa	Predicted RBP	13.39	□□□□□ -0.27
PPP6R3-223	ENST00000531432	SPSB2	Q99619	263 aa		13.39	□□□□□ -0.27
PPP6R3-223	ENST00000531432	ADH1B	P00325	375 aa		13.37	□□□□□ -0.27
PPP6R3-223	ENST00000531432	PPP2R2D	Q66LE6	453 aa		13.37	□□□□□ -0.27
PPP6R3-223	ENST00000531432	RETREG3	Q86VR2	466 aa		13.37	□□□□□ -0.27
PPP6R3-223	ENST00000531432	USB1	Q9BQ65	265 aa	Known RBP	13.37	□□□□□ -0.27
PPP6R3-223	ENST00000531432	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP6R3-223	ENST00000531432	NUTM2E	B1AL46	878 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP6R3-223	ENST00000531432	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP6R3-223	ENST00000531432	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP6R3-223	ENST00000531432	FAM160A2	Q8N612	972 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP6R3-223	ENST00000531432	SPDYE5	A6NIY4	337 aa		13.34	□□□□□ -0.27
PPP6R3-223	ENST00000531432	CFAP99	D6REC4	459 aa		13.34	□□□□□ -0.27
PPP6R3-223	ENST00000531432	PRR7	Q8TB68	274 aa		13.33	□□□□□ -0.28
PPP6R3-223	ENST00000531432	PRDM9	Q9NQV7	894 aa		13.33	□□□□□ -0.28
PPP6R3-223	ENST00000531432	RFC5	P40937	340 aa		13.32	□□□□□ -0.28
PPP6R3-223	ENST00000531432	MSS51	Q4VC12	460 aa		13.32	□□□□□ -0.28
PPP6R3-223	ENST00000531432	PLA2G2E	Q9NZK7	142 aa		13.31	□□□□□ -0.28
PPP6R3-223	ENST00000531432	SLC6A16	Q9GZN6	736 aa		13.3	□□□□□ -0.28
PPP6R3-223	ENST00000531432	S1PR4	O95977	384 aa		13.29	□□□□□ -0.28
PPP6R3-223	ENST00000531432	IFFO2	Q5TF58	517 aa		13.29	□□□□□ -0.28
PPP6R3-223	ENST00000531432	JUND	P17535	347 aa		13.27	□□□□□ -0.29
PPP6R3-223	ENST00000531432	TSC1	Q92574	1164 aa		13.27	□□□□□ -0.29
PPP6R3-223	ENST00000531432	DXO	O77932	396 aa	Known RBP	13.25	□□□□□ -0.29
PPP6R3-223	ENST00000531432	MMP16	P51512	607 aa		13.25	□□□□□ -0.29
PPP6R3-223	ENST00000531432	AP1G2	O75843	785 aa		13.24	□□□□□ -0.29
PPP6R3-223	ENST00000531432	DESI1	Q6ICB0	168 aa		13.24	□□□□□ -0.29
PPP6R3-223	ENST00000531432	PPEF1	O14829	653 aa	Predicted RBP	13.22	□□□□□ -0.29
PPP6R3-223	ENST00000531432	CTDSPL2	Q05D32	466 aa		13.22	□□□□□ -0.29
PPP6R3-223	ENST00000531432	PPP1R18	Q6NYC8	613 aa		13.22	□□□□□ -0.29
PPP6R3-223	ENST00000531432	HELB	Q8NG08	1087 aa	Predicted RBP	13.22	□□□□□ -0.29
PPP6R3-223	ENST00000531432	PER1	O15534	1290 aa	Predicted RBP	13.21	□□□□□ -0.29
PPP6R3-223	ENST00000531432	TMEM259	Q4ZIN3	620 aa		13.21	□□□□□ -0.29
PPP6R3-223	ENST00000531432	RNF223	E7ERA6	249 aa		13.19	□□□□□ -0.3
PPP6R3-223	ENST00000531432	USP17L8	P0C7I0	530 aa		13.19	□□□□□ -0.3
PPP6R3-223	ENST00000531432	LYPD8	Q6UX82	237 aa		13.19	□□□□□ -0.3
PPP6R3-223	ENST00000531432	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.19	□□□□□ -0.3
PPP6R3-223	ENST00000531432		A0A0G2JS52	829 aa		13.17	□□□□□ -0.3
PPP6R3-223	ENST00000531432	GGCX	P38435	758 aa		13.17	□□□□□ -0.3
PPP6R3-223	ENST00000531432	PTPRN	Q16849	979 aa		13.17	□□□□□ -0.3
PPP6R3-223	ENST00000531432	LRRN4	Q8WUT4	740 aa		13.17	□□□□□ -0.3
PPP6R3-223	ENST00000531432	FCF1	Q9Y324	198 aa	Known RBP	13.17	□□□□□ -0.3
PPP6R3-223	ENST00000531432	BANK1	Q8NDB2	785 aa		13.16	□□□□□ -0.3
PPP6R3-223	ENST00000531432	NUDT12	Q9BQG2	462 aa		13.16	□□□□□ -0.3
PPP6R3-223	ENST00000531432	GTF3C3	Q9Y5Q9	886 aa		13.16	□□□□□ -0.3
PPP6R3-223	ENST00000531432	ANKLE1	Q8NAG6	615 aa		13.14	□□□□□ -0.31
PPP6R3-223	ENST00000531432	SNRK	Q9NRH2	765 aa		13.14	□□□□□ -0.31
PPP6R3-223	ENST00000531432	CCNYL3	P0C7X3	344 aa		13.13	□□□□□ -0.31
PPP6R3-223	ENST00000531432	PLA2G2C	Q5R387	149 aa		13.13	□□□□□ -0.31
PPP6R3-223	ENST00000531432	CCDC24	Q8N4L8	307 aa		13.13	□□□□□ -0.31
PPP6R3-223	ENST00000531432	HMX1	Q9NP08	348 aa	Predicted RBP	13.13	□□□□□ -0.31
PPP6R3-223	ENST00000531432	F12	P00748	615 aa	Predicted RBP	13.12	□□□□□ -0.31
PPP6R3-223	ENST00000531432	MAP10	Q9P2G4	905 aa		13.11	□□□□□ -0.31
PPP6R3-223	ENST00000531432	MCM6	Q14566	821 aa		13.1	□□□□□ -0.31
PPP6R3-223	ENST00000531432	MTMR14	Q8NCE2	650 aa		13.1	□□□□□ -0.31
PPP6R3-223	ENST00000531432	EVA1B	Q9NVM1	165 aa		13.1	□□□□□ -0.31
PPP6R3-223	ENST00000531432	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.09	□□□□□ -0.31
PPP6R3-223	ENST00000531432	KCNH2	Q12809	1159 aa		13.08	□□□□□ -0.32
PPP6R3-223	ENST00000531432	CTH	P32929	405 aa		13.07	□□□□□ -0.32
PPP6R3-223	ENST00000531432	EPS8L1	Q8TE68	723 aa		13.07	□□□□□ -0.32
PPP6R3-223	ENST00000531432	EMID1	Q96A84	441 aa	Predicted RBP	13.07	□□□□□ -0.32
PPP6R3-223	ENST00000531432	GJD4	Q96KN9	370 aa	Predicted RBP	13.07	□□□□□ -0.32
PPP6R3-223	ENST00000531432	NR6A1	Q15406	480 aa		13.06	□□□□□ -0.32
PPP6R3-223	ENST00000531432	TRIM34	Q9BYJ4	488 aa		13.06	□□□□□ -0.32
PPP6R3-223	ENST00000531432	FLII	Q13045	1269 aa		13.04	□□□□□ -0.32
PPP6R3-223	ENST00000531432	SOCS7	O14512	581 aa		13.03	□□□□□ -0.32
PPP6R3-223	ENST00000531432	LIAT1	Q6ZQX7	453 aa		13.03	□□□□□ -0.32
PPP6R3-223	ENST00000531432	UNC93B1	Q9H1C4	597 aa		13.03	□□□□□ -0.32
PPP6R3-223	ENST00000531432	ZBTB24	O43167	697 aa	Predicted RBP	12.98	□□□□□ -0.33
PPP6R3-223	ENST00000531432	SLC19A1	P41440	591 aa		12.97	□□□□□ -0.33
PPP6R3-223	ENST00000531432	RPIA	P49247	311 aa		12.97	□□□□□ -0.33
PPP6R3-223	ENST00000531432	GPR37L1	O60883	481 aa		12.96	□□□□□ -0.33
PPP6R3-223	ENST00000531432	TRIM32	Q13049	653 aa		12.96	□□□□□ -0.33
PPP6R3-223	ENST00000531432	PRKD2	Q9BZL6	878 aa		12.96	□□□□□ -0.33
PPP6R3-223	ENST00000531432	FKBPL	Q9UIM3	349 aa		12.96	□□□□□ -0.33
PPP6R3-223	ENST00000531432	TBC1D2B	Q9UPU7	963 aa		12.96	□□□□□ -0.33
PPP6R3-223	ENST00000531432	LINC01559	Q495D7	138 aa		12.95	□□□□□ -0.34
PPP6R3-223	ENST00000531432	BAP1	Q92560	729 aa		12.95	□□□□□ -0.34
PPP6R3-223	ENST00000531432	POM121	Q96HA1	1249 aa		12.95	□□□□□ -0.34
PPP6R3-223	ENST00000531432	NDUFB9	Q9Y6M9	179 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms