RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
C11orf54-208ENST00000530279 RASSF7Q02833 373 aa8.66□□□□□ -1.02
C11orf54-208ENST00000530279 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
C11orf54-208ENST00000530279 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-208ENST00000530279 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
C11orf54-208ENST00000530279 BMP1P13497 986 aa8.65□□□□□ -1.02
C11orf54-208ENST00000530279 ATP6V1AP38606 617 aa8.64□□□□□ -1.03
C11orf54-208ENST00000530279 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
C11orf54-208ENST00000530279 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
C11orf54-208ENST00000530279 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
C11orf54-208ENST00000530279 FECHP22830 423 aa8.63□□□□□ -1.03
C11orf54-208ENST00000530279 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
C11orf54-208ENST00000530279 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
C11orf54-208ENST00000530279 FUT2Q10981 343 aa8.62□□□□□ -1.03
C11orf54-208ENST00000530279 XP32Q5T750 250 aa8.62□□□□□ -1.03
C11orf54-208ENST00000530279 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
C11orf54-208ENST00000530279 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
C11orf54-208ENST00000530279 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
C11orf54-208ENST00000530279 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-208ENST00000530279 PXYLP1Q8TE99 480 aa8.59□□□□□ -1.03
C11orf54-208ENST00000530279 OATP04181 439 aa8.58□□□□□ -1.04
C11orf54-208ENST00000530279 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
C11orf54-208ENST00000530279 WNT7BP56706 349 aa8.57□□□□□ -1.04
C11orf54-208ENST00000530279 SKOR1P84550 965 aa8.57□□□□□ -1.04
C11orf54-208ENST00000530279 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
C11orf54-208ENST00000530279 MMP16P51512 607 aa8.56□□□□□ -1.04
C11orf54-208ENST00000530279 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
C11orf54-208ENST00000530279 IGHA1P01876 353 aa8.55□□□□□ -1.04
C11orf54-208ENST00000530279 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
C11orf54-208ENST00000530279 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
C11orf54-208ENST00000530279 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-208ENST00000530279 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
C11orf54-208ENST00000530279 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
C11orf54-208ENST00000530279 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-208ENST00000530279 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.05
C11orf54-208ENST00000530279 GCGRP47871 477 aa8.51□□□□□ -1.05
C11orf54-208ENST00000530279 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
C11orf54-208ENST00000530279 DDX11L8A8MPP1 907 aa8.5□□□□□ -1.05
C11orf54-208ENST00000530279 SIAH2O43255 324 aa8.5□□□□□ -1.05
C11orf54-208ENST00000530279 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
C11orf54-208ENST00000530279 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-208ENST00000530279 FCHSD2O94868 740 aa8.49□□□□□ -1.05
C11orf54-208ENST00000530279 Q3C1V9 767 aa8.49□□□□□ -1.05
C11orf54-208ENST00000530279 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
C11orf54-208ENST00000530279 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
C11orf54-208ENST00000530279 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
C11orf54-208ENST00000530279 SCARF1Q14162 830 aa8.48□□□□□ -1.05
C11orf54-208ENST00000530279 SOBPA7XYQ1 873 aa8.46□□□□□ -1.06
C11orf54-208ENST00000530279 FOXK2Q01167 660 aa8.46□□□□□ -1.06
C11orf54-208ENST00000530279 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
C11orf54-208ENST00000530279 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
C11orf54-208ENST00000530279 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
C11orf54-208ENST00000530279 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
C11orf54-208ENST00000530279 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
C11orf54-208ENST00000530279 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
C11orf54-208ENST00000530279 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
C11orf54-208ENST00000530279 IRS1P35568 1242 aa8.42□□□□□ -1.06
C11orf54-208ENST00000530279 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
C11orf54-208ENST00000530279 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.39□□□□□ -1.07
C11orf54-208ENST00000530279 ADAM23O75077 832 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 SPRYD3Q8NCJ5 442 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 PSMG3-AS1Q96PY0 264 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 CNTNAP3Q9BZ76 1288 aa8.39□□□□□ -1.07
C11orf54-208ENST00000530279 MAN1A2O60476 641 aa8.38□□□□□ -1.07
C11orf54-208ENST00000530279 KRT76Q01546 638 aa8.38□□□□□ -1.07
C11orf54-208ENST00000530279 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
C11orf54-208ENST00000530279 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
C11orf54-208ENST00000530279 HIC1Q14526 733 aa8.36□□□□□ -1.07
C11orf54-208ENST00000530279 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
C11orf54-208ENST00000530279 ZNF385CQ66K41 422 aaPredicted RBP8.35□□□□□ -1.07
C11orf54-208ENST00000530279 NLRP7Q8WX94 980 aa8.35□□□□□ -1.07
C11orf54-208ENST00000530279 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
C11orf54-208ENST00000530279 TIMP2P16035 220 aa8.34□□□□□ -1.07
C11orf54-208ENST00000530279 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
C11orf54-208ENST00000530279 NNTQ13423 1086 aa8.34□□□□□ -1.07
C11orf54-208ENST00000530279 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-208ENST00000530279 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
C11orf54-208ENST00000530279 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
C11orf54-208ENST00000530279 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
C11orf54-208ENST00000530279 SH3BP2P78314 561 aa8.33□□□□□ -1.08
C11orf54-208ENST00000530279 ADH1CP00326 375 aa8.32□□□□□ -1.08
C11orf54-208ENST00000530279 JUNDP17535 347 aa8.31□□□□□ -1.08
C11orf54-208ENST00000530279 SCARF2Q96GP6 870 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-208ENST00000530279 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
C11orf54-208ENST00000530279 MSTNO14793 375 aa8.3□□□□□ -1.08
C11orf54-208ENST00000530279 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-208ENST00000530279 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
C11orf54-208ENST00000530279 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
C11orf54-208ENST00000530279 MPNDQ8N594 471 aa8.29□□□□□ -1.08
C11orf54-208ENST00000530279 NUDT12Q9BQG2 462 aa8.29□□□□□ -1.08
C11orf54-208ENST00000530279 WHAMMQ8TF30 809 aa8.27□□□□□ -1.09
C11orf54-208ENST00000530279 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-208ENST00000530279 KDM4AO75164 1064 aa8.26□□□□□ -1.09
C11orf54-208ENST00000530279 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
C11orf54-208ENST00000530279 GNPATO15228 680 aa8.25□□□□□ -1.09
C11orf54-208ENST00000530279 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
C11orf54-208ENST00000530279 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
C11orf54-208ENST00000530279 SPOCK3Q9BQ16 436 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms