RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 DEPDC5O75140 1603 aa9.64□□□□□ -0.87
C11orf54-207ENST00000528288 PPRC1Q5VV67 1664 aaKnown RBP9.63□□□□□ -0.87
C11orf54-207ENST00000528288 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
C11orf54-207ENST00000528288 MINK1Q8N4C8 1332 aaPredicted RBP9.63□□□□□ -0.87
C11orf54-207ENST00000528288 IL27Q8NEV9 243 aa9.63□□□□□ -0.87
C11orf54-207ENST00000528288 RUNDC1Q96C34 613 aa9.63□□□□□ -0.87
C11orf54-207ENST00000528288 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
C11orf54-207ENST00000528288 ABCA9Q8IUA7 1624 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 VWDEQ8N2E2 1590 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 DDRGK1Q96HY6 314 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
C11orf54-207ENST00000528288 PCDHB15Q9Y5E8 787 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 CD109Q6YHK3 1445 aa9.62□□□□□ -0.87
C11orf54-207ENST00000528288 IDI1Q13907 227 aa9.61□□□□□ -0.87
C11orf54-207ENST00000528288 NFKBIBQ15653 356 aa9.61□□□□□ -0.87
C11orf54-207ENST00000528288 KIF1BO60333 1816 aa9.61□□□□□ -0.87
C11orf54-207ENST00000528288 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
C11orf54-207ENST00000528288 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-207ENST00000528288 CGNL1Q0VF96 1302 aa9.61□□□□□ -0.87
C11orf54-207ENST00000528288 MYOM2P54296 1465 aa9.6□□□□□ -0.87
C11orf54-207ENST00000528288 POLR3AO14802 1390 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-207ENST00000528288 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-207ENST00000528288 CFAP53Q96M91 514 aa9.6□□□□□ -0.87
C11orf54-207ENST00000528288 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
C11orf54-207ENST00000528288 ARAP3Q8WWN8 1544 aa9.59□□□□□ -0.87
C11orf54-207ENST00000528288 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
C11orf54-207ENST00000528288 EVC2Q86UK5 1308 aa9.59□□□□□ -0.87
C11orf54-207ENST00000528288 FRAT2O75474 233 aaPredicted RBP9.59□□□□□ -0.87
C11orf54-207ENST00000528288 PDE3AQ14432 1141 aa9.58□□□□□ -0.88
C11orf54-207ENST00000528288 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-207ENST00000528288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.58□□□□□ -0.88
C11orf54-207ENST00000528288 OSCARQ8IYS5 282 aa9.58□□□□□ -0.88
C11orf54-207ENST00000528288 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
C11orf54-207ENST00000528288 POGKQ9P215 609 aa9.58□□□□□ -0.88
C11orf54-207ENST00000528288 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
C11orf54-207ENST00000528288 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
C11orf54-207ENST00000528288 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
C11orf54-207ENST00000528288 PDZRN3Q9UPQ7 1066 aa9.57□□□□□ -0.88
C11orf54-207ENST00000528288 MLECQ14165 292 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 USP19O94966 1318 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
C11orf54-207ENST00000528288 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 KIAA1210Q9ULL0 1709 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 NRXN1Q9ULB1 1477 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 FRMPD1Q5SYB0 1578 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 QRICH2Q9H0J4 1663 aa9.56□□□□□ -0.88
C11orf54-207ENST00000528288 BRPF3Q9ULD4 1205 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 A0A1W2PP64 1363 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 ADGRB1O14514 1584 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 SBNO2Q9Y2G9 1366 aa9.55□□□□□ -0.88
C11orf54-207ENST00000528288 ITPRIPQ8IWB1 547 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
C11orf54-207ENST00000528288 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 FYB1O15117 783 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 WDR63Q8IWG1 891 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 ELL2O00472 640 aaPredicted RBP9.54□□□□□ -0.88
C11orf54-207ENST00000528288 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 ARXQ96QS3 562 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 SHPRHQ149N8 1683 aa9.54□□□□□ -0.88
C11orf54-207ENST00000528288 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 HMOX1P09601 288 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
C11orf54-207ENST00000528288 RIPK4P57078 832 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 CYB5RLQ6IPT4 315 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 MAPK8IP3Q9UPT6 1336 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 ABCC3O15438 1527 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 ANKRD36BQ8N2N9 1353 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 USP35Q9P2H5 1018 aa9.53□□□□□ -0.88
C11orf54-207ENST00000528288 GSE1Q14687 1217 aa9.52□□□□□ -0.88
C11orf54-207ENST00000528288 DZIP1LQ8IYY4 767 aaKnown RBP9.52□□□□□ -0.88
C11orf54-207ENST00000528288 CDK19Q9BWU1 502 aa9.52□□□□□ -0.88
C11orf54-207ENST00000528288 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.88
C11orf54-207ENST00000528288 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.88
C11orf54-207ENST00000528288 TRIM27P14373 513 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 ZKSCAN2Q63HK3 967 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 SIGLEC1Q9BZZ2 1709 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 PPLO60437 1756 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 PMFBP1Q8TBY8 1022 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 GLI2P10070 1586 aa9.52□□□□□ -0.89
C11orf54-207ENST00000528288 MVPQ14764 893 aaKnown RBP9.51□□□□□ -0.89
C11orf54-207ENST00000528288 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
C11orf54-207ENST00000528288 IQSEC2Q5JU85 1478 aa9.51□□□□□ -0.89
C11orf54-207ENST00000528288 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
C11orf54-207ENST00000528288 PLEKHF1Q96S99 279 aa9.51□□□□□ -0.89
C11orf54-207ENST00000528288 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-207ENST00000528288 MFAP1P55081 439 aaKnown RBP9.51□□□□□ -0.89
C11orf54-207ENST00000528288 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
C11orf54-207ENST00000528288 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
C11orf54-207ENST00000528288 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms