RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
CTSC-203ENST00000524463 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
CTSC-203ENST00000524463 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
CTSC-203ENST00000524463 MAP4K4O95819 1239 aaPredicted RBP12.75□□□□□ -0.37
CTSC-203ENST00000524463 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
CTSC-203ENST00000524463 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
CTSC-203ENST00000524463 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
CTSC-203ENST00000524463 MYL6BP14649 208 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 RALYLQ86SE5 291 aaKnown RBP12.74□□□□□ -0.37
CTSC-203ENST00000524463 TXNDC2Q86VQ3 553 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 EPS15P42566 896 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 SIL1Q9H173 461 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 TOM1L2Q6ZVM7 507 aa12.74□□□□□ -0.37
CTSC-203ENST00000524463 USP47Q96K76 1375 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
CTSC-203ENST00000524463 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 CNNM1Q9NRU3 951 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
CTSC-203ENST00000524463 PDILTQ8N807 584 aa12.73□□□□□ -0.37
CTSC-203ENST00000524463 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
CTSC-203ENST00000524463 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
CTSC-203ENST00000524463 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
CTSC-203ENST00000524463 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
CTSC-203ENST00000524463 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
CTSC-203ENST00000524463 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
CTSC-203ENST00000524463 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
CTSC-203ENST00000524463 IPO7O95373 1038 aaKnown RBP12.71□□□□□ -0.37
CTSC-203ENST00000524463 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
CTSC-203ENST00000524463 RNF20Q5VTR2 975 aa12.71□□□□□ -0.38
CTSC-203ENST00000524463 ANKRD20A12PQ8NF67 263 aa12.71□□□□□ -0.38
CTSC-203ENST00000524463 PDE4AP27815 886 aa12.71□□□□□ -0.38
CTSC-203ENST00000524463 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.38
CTSC-203ENST00000524463 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.38
CTSC-203ENST00000524463 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.38
CTSC-203ENST00000524463 WIZO95785 1651 aa12.7□□□□□ -0.38
CTSC-203ENST00000524463 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
CTSC-203ENST00000524463 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
CTSC-203ENST00000524463 DDX11L8A8MPP1 907 aa12.7□□□□□ -0.38
CTSC-203ENST00000524463 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
CTSC-203ENST00000524463 ATP6V1DQ9Y5K8 247 aa12.7□□□□□ -0.38
CTSC-203ENST00000524463 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
CTSC-203ENST00000524463 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
CTSC-203ENST00000524463 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
CTSC-203ENST00000524463 CABP4P57796 275 aa12.69□□□□□ -0.38
CTSC-203ENST00000524463 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
CTSC-203ENST00000524463 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
CTSC-203ENST00000524463 REC8O95072 547 aa12.68□□□□□ -0.38
CTSC-203ENST00000524463 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
CTSC-203ENST00000524463 PHLDB1Q86UU1 1377 aa12.68□□□□□ -0.38
CTSC-203ENST00000524463 STK3Q13188 491 aa12.68□□□□□ -0.38
CTSC-203ENST00000524463 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
CTSC-203ENST00000524463 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 ERC2O15083 957 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
CTSC-203ENST00000524463 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
CTSC-203ENST00000524463 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 BRMS1Q9HCU9 246 aa12.67□□□□□ -0.38
CTSC-203ENST00000524463 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
CTSC-203ENST00000524463 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
CTSC-203ENST00000524463 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
CTSC-203ENST00000524463 OFD1O75665 1012 aa12.66□□□□□ -0.38
CTSC-203ENST00000524463 AFAP1Q8N556 730 aa12.66□□□□□ -0.38
CTSC-203ENST00000524463 CDK5RAP3Q96JB5 506 aa12.66□□□□□ -0.38
CTSC-203ENST00000524463 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
CTSC-203ENST00000524463 GNAI1P63096 354 aa12.65□□□□□ -0.38
CTSC-203ENST00000524463 SLC26A8Q96RN1 970 aa12.65□□□□□ -0.38
CTSC-203ENST00000524463 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
CTSC-203ENST00000524463 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.39
CTSC-203ENST00000524463 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
CTSC-203ENST00000524463 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
CTSC-203ENST00000524463 DHX37Q8IY37 1157 aaKnown RBP12.64□□□□□ -0.39
CTSC-203ENST00000524463 NUP133Q8WUM0 1156 aa12.64□□□□□ -0.39
CTSC-203ENST00000524463 MTHFSP49914 203 aa12.64□□□□□ -0.39
CTSC-203ENST00000524463 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
CTSC-203ENST00000524463 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
CTSC-203ENST00000524463 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
CTSC-203ENST00000524463 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
CTSC-203ENST00000524463 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
CTSC-203ENST00000524463 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
CTSC-203ENST00000524463 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
CTSC-203ENST00000524463 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTSC-203ENST00000524463 SETQ01105 290 aaPredicted RBP12.63□□□□□ -0.39
CTSC-203ENST00000524463 CAGE1Q8TC20 777 aa12.62□□□□□ -0.39
CTSC-203ENST00000524463 TSR2Q969E8 191 aaKnown RBP12.62□□□□□ -0.39
CTSC-203ENST00000524463 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
CTSC-203ENST00000524463 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
CTSC-203ENST00000524463 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTSC-203ENST00000524463 CNTROBQ8N137 903 aa12.62□□□□□ -0.39
CTSC-203ENST00000524463 RNF214Q8ND24 703 aa12.62□□□□□ -0.39
CTSC-203ENST00000524463 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
CTSC-203ENST00000524463 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
CTSC-203ENST00000524463 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms