RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TSC1Q92574 1164 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 RTL5Q5HYW3 569 aaPredicted RBP7.63□□□□□ -1.19
SKP1-212ENST00000523966 WWC1Q8IX03 1113 aa7.62□□□□□ -1.19
SKP1-212ENST00000523966 HLA-CQ95604 372 aa7.62□□□□□ -1.19
SKP1-212ENST00000523966 PCDHGC3Q9UN70 934 aa7.62□□□□□ -1.19
SKP1-212ENST00000523966 PUS10Q3MIT2 529 aaKnown RBP7.61□□□□□ -1.19
SKP1-212ENST00000523966 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
SKP1-212ENST00000523966 NR1I2O75469 434 aa7.6□□□□□ -1.19
SKP1-212ENST00000523966 MORN1Q5T089 497 aa7.6□□□□□ -1.19
SKP1-212ENST00000523966 KCTD12Q96CX2 325 aaKnown RBP7.6□□□□□ -1.19
SKP1-212ENST00000523966 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
SKP1-212ENST00000523966 POTEMA6NI47 508 aa7.59□□□□□ -1.19
SKP1-212ENST00000523966 A6NJR5 290 aa7.59□□□□□ -1.19
SKP1-212ENST00000523966 CDAN1Q8IWY9 1227 aa7.59□□□□□ -1.19
SKP1-212ENST00000523966 CLUAP1Q96AJ1 413 aa7.59□□□□□ -1.19
SKP1-212ENST00000523966 SLC27A5Q9Y2P5 690 aa7.59□□□□□ -1.19
SKP1-212ENST00000523966 USP17L8P0C7I0 530 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 APLP1P51693 650 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 POTEGQ6S5H5 508 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 PRR7Q8TB68 274 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
SKP1-212ENST00000523966 FMNL1O95466 1100 aaPredicted RBP7.57□□□□□ -1.2
SKP1-212ENST00000523966 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
SKP1-212ENST00000523966 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
SKP1-212ENST00000523966 NYAP1Q6ZVC0 841 aa7.57□□□□□ -1.2
SKP1-212ENST00000523966 SYMPKQ92797 1274 aaKnown RBP7.57□□□□□ -1.2
SKP1-212ENST00000523966 WBP1LQ9NX94 342 aa7.57□□□□□ -1.2
SKP1-212ENST00000523966 CTDSPL2Q05D32 466 aa7.56□□□□□ -1.2
SKP1-212ENST00000523966 PROSER2Q86WR7 435 aaPredicted RBP7.56□□□□□ -1.2
SKP1-212ENST00000523966 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
SKP1-212ENST00000523966 SOCS7O14512 581 aa7.55□□□□□ -1.2
SKP1-212ENST00000523966 USB1Q9BQ65 265 aaKnown RBP7.55□□□□□ -1.2
SKP1-212ENST00000523966 SALL2Q9Y467 1007 aaPredicted RBP7.55□□□□□ -1.2
SKP1-212ENST00000523966 CFAP99D6REC4 459 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 TRAK2O60296 914 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 PTPN5P54829 565 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 COG6Q9Y2V7 657 aa7.54□□□□□ -1.2
SKP1-212ENST00000523966 ABL2P42684 1182 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 COPS2P61201 443 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 BLOC1S3Q6QNY0 202 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 GDPD2Q9HCC8 539 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 NDUFB9Q9Y6M9 179 aa7.53□□□□□ -1.2
SKP1-212ENST00000523966 DESI1Q6ICB0 168 aa7.52□□□□□ -1.21
SKP1-212ENST00000523966 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
SKP1-212ENST00000523966 ZNF330Q9Y3S2 320 aaPredicted RBP7.52□□□□□ -1.21
SKP1-212ENST00000523966 RNF19BQ6ZMZ0 732 aa7.51□□□□□ -1.21
SKP1-212ENST00000523966 SPSB2Q99619 263 aa7.51□□□□□ -1.21
SKP1-212ENST00000523966 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
SKP1-212ENST00000523966 LRRN4Q8WUT4 740 aa7.5□□□□□ -1.21
SKP1-212ENST00000523966 PCDH10Q9P2E7 1040 aa7.5□□□□□ -1.21
SKP1-212ENST00000523966 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
SKP1-212ENST00000523966 ZNF777Q9ULD5 760 aaPredicted RBP7.49□□□□□ -1.21
SKP1-212ENST00000523966 JUNDP17535 347 aa7.48□□□□□ -1.21
SKP1-212ENST00000523966 LYPD8Q6UX82 237 aa7.48□□□□□ -1.21
SKP1-212ENST00000523966 ARID3AQ99856 593 aa7.48□□□□□ -1.21
SKP1-212ENST00000523966 IL21Q9HBE4 155 aa7.48□□□□□ -1.21
SKP1-212ENST00000523966 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
SKP1-212ENST00000523966 CTHP32929 405 aa7.47□□□□□ -1.21
SKP1-212ENST00000523966 WASHC4Q2M389 1173 aa7.47□□□□□ -1.21
SKP1-212ENST00000523966 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
SKP1-212ENST00000523966 ARXQ96QS3 562 aa7.47□□□□□ -1.21
SKP1-212ENST00000523966 MTRQ99707 1265 aa7.47□□□□□ -1.21
SKP1-212ENST00000523966 HMX1Q9NP08 348 aaPredicted RBP7.47□□□□□ -1.21
SKP1-212ENST00000523966 PER1O15534 1290 aaPredicted RBP7.46□□□□□ -1.22
SKP1-212ENST00000523966 ZPR1O75312 459 aa7.46□□□□□ -1.22
SKP1-212ENST00000523966 NR6A1Q15406 480 aa7.46□□□□□ -1.22
SKP1-212ENST00000523966 MSS51Q4VC12 460 aa7.46□□□□□ -1.22
SKP1-212ENST00000523966 FNBP4Q8N3X1 1017 aaPredicted RBP7.46□□□□□ -1.22
SKP1-212ENST00000523966 CCDC97Q96F63 343 aaPredicted RBP7.46□□□□□ -1.22
SKP1-212ENST00000523966 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
SKP1-212ENST00000523966 ADH1BP00325 375 aa7.45□□□□□ -1.22
SKP1-212ENST00000523966 PTPRNQ16849 979 aa7.45□□□□□ -1.22
SKP1-212ENST00000523966 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
SKP1-212ENST00000523966 HCSTQ9UBK5 93 aa7.44□□□□□ -1.22
SKP1-212ENST00000523966 CCNYL3P0C7X3 344 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 HOMEZQ8IX15 550 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 CCDC24Q8N4L8 307 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 CALR3Q96L12 384 aaKnown RBP7.43□□□□□ -1.22
SKP1-212ENST00000523966 NUDT12Q9BQG2 462 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 SLC6A16Q9GZN6 736 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 SERPINA10Q9UK55 444 aa7.43□□□□□ -1.22
SKP1-212ENST00000523966 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
SKP1-212ENST00000523966 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
SKP1-212ENST00000523966 TLL1O43897 1013 aa7.41□□□□□ -1.22
SKP1-212ENST00000523966 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
SKP1-212ENST00000523966 MMP16P51512 607 aa7.41□□□□□ -1.22
SKP1-212ENST00000523966 TJAP1Q5JTD0 557 aa7.41□□□□□ -1.22
SKP1-212ENST00000523966 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
SKP1-212ENST00000523966 KCNH2Q12809 1159 aa7.4□□□□□ -1.22
SKP1-212ENST00000523966 CCDC82Q8N4S0 544 aa7.4□□□□□ -1.22
SKP1-212ENST00000523966 ZNF516Q92618 1163 aa7.4□□□□□ -1.22
SKP1-212ENST00000523966 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
SKP1-212ENST00000523966 EVA1BQ9NVM1 165 aa7.4□□□□□ -1.22
SKP1-212ENST00000523966 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms