RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
CCNC-216ENST00000523961 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
CCNC-216ENST00000523961 TRAK1Q9UPV9 953 aa17.98■□□□□ 0.47
CCNC-216ENST00000523961 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
CCNC-216ENST00000523961 PRAM1Q96QH2 718 aa17.97■□□□□ 0.47
CCNC-216ENST00000523961 POGKQ9P215 609 aa17.97■□□□□ 0.47
CCNC-216ENST00000523961 MST1RQ04912 1400 aa17.96■□□□□ 0.47
CCNC-216ENST00000523961 ROBO1Q9Y6N7 1651 aa17.96■□□□□ 0.47
CCNC-216ENST00000523961 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
CCNC-216ENST00000523961 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
CCNC-216ENST00000523961 SAFB2Q14151 953 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCNC-216ENST00000523961 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
CCNC-216ENST00000523961 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
CCNC-216ENST00000523961 C1orf167Q5SNV9 1468 aa17.91■□□□□ 0.46
CCNC-216ENST00000523961 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
CCNC-216ENST00000523961 TIMELESSQ9UNS1 1208 aa17.89■□□□□ 0.45
CCNC-216ENST00000523961 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.45
CCNC-216ENST00000523961 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
CCNC-216ENST00000523961 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
CCNC-216ENST00000523961 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
CCNC-216ENST00000523961 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
CCNC-216ENST00000523961 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
CCNC-216ENST00000523961 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
CCNC-216ENST00000523961 ESCO1Q5FWF5 840 aa17.85■□□□□ 0.45
CCNC-216ENST00000523961 GPRASP1Q5JY77 1395 aa17.85■□□□□ 0.45
CCNC-216ENST00000523961 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
CCNC-216ENST00000523961 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
CCNC-216ENST00000523961 PHLPP1O60346 1717 aa17.84■□□□□ 0.45
CCNC-216ENST00000523961 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
CCNC-216ENST00000523961 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
CCNC-216ENST00000523961 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
CCNC-216ENST00000523961 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
CCNC-216ENST00000523961 WASLO00401 505 aaPredicted RBP17.83■□□□□ 0.44
CCNC-216ENST00000523961 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
CCNC-216ENST00000523961 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
CCNC-216ENST00000523961 COL16A1Q07092 1604 aaPredicted RBP17.8■□□□□ 0.44
CCNC-216ENST00000523961 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
CCNC-216ENST00000523961 JCADQ9P266 1359 aa17.79■□□□□ 0.44
CCNC-216ENST00000523961 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
CCNC-216ENST00000523961 DDX17Q92841 729 aaKnown RBP17.79■□□□□ 0.44
CCNC-216ENST00000523961 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
CCNC-216ENST00000523961 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
CCNC-216ENST00000523961 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.44
CCNC-216ENST00000523961 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.44
CCNC-216ENST00000523961 FOXO3O43524 673 aa17.77■□□□□ 0.44
CCNC-216ENST00000523961 CDK19Q9BWU1 502 aa17.77■□□□□ 0.44
CCNC-216ENST00000523961 PRR36Q9H6K5 1346 aa17.75■□□□□ 0.43
CCNC-216ENST00000523961 KIF1AQ12756 1690 aa17.75■□□□□ 0.43
CCNC-216ENST00000523961 QRICH2Q9H0J4 1663 aa17.74■□□□□ 0.43
CCNC-216ENST00000523961 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
CCNC-216ENST00000523961 NUDT16Q96DE0 195 aaKnown RBP17.74■□□□□ 0.43
CCNC-216ENST00000523961 RGPD8O14715 1765 aaPredicted RBP17.73■□□□□ 0.43
CCNC-216ENST00000523961 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
CCNC-216ENST00000523961 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
CCNC-216ENST00000523961 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
CCNC-216ENST00000523961 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
CCNC-216ENST00000523961 ATP7BP35670 1465 aa17.71■□□□□ 0.43
CCNC-216ENST00000523961 PXDNQ92626 1479 aa17.71■□□□□ 0.43
CCNC-216ENST00000523961 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
CCNC-216ENST00000523961 XPCQ01831 940 aaPredicted RBP17.71■□□□□ 0.43
CCNC-216ENST00000523961 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
CCNC-216ENST00000523961 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
CCNC-216ENST00000523961 PSME1Q06323 249 aa17.7■□□□□ 0.42
CCNC-216ENST00000523961 KRT28Q7Z3Y7 464 aa17.7■□□□□ 0.42
CCNC-216ENST00000523961 SHPRHQ149N8 1683 aa17.7■□□□□ 0.42
CCNC-216ENST00000523961 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
CCNC-216ENST00000523961 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
CCNC-216ENST00000523961 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
CCNC-216ENST00000523961 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
CCNC-216ENST00000523961 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
CCNC-216ENST00000523961 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
CCNC-216ENST00000523961 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
CCNC-216ENST00000523961 SPATA31A3Q5VYP0 1347 aa17.66■□□□□ 0.42
CCNC-216ENST00000523961 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
CCNC-216ENST00000523961 USP47Q96K76 1375 aa17.66■□□□□ 0.42
CCNC-216ENST00000523961 ST20-MTHFSA0A0A6YYL1 179 aa17.65■□□□□ 0.42
CCNC-216ENST00000523961 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
CCNC-216ENST00000523961 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
CCNC-216ENST00000523961 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
CCNC-216ENST00000523961 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.41
CCNC-216ENST00000523961 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
CCNC-216ENST00000523961 ACEP12821 1306 aa17.63■□□□□ 0.41
CCNC-216ENST00000523961 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
CCNC-216ENST00000523961 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
CCNC-216ENST00000523961 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
CCNC-216ENST00000523961 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
CCNC-216ENST00000523961 TESK2Q96S53 571 aa17.62■□□□□ 0.41
CCNC-216ENST00000523961 LRP6O75581 1613 aa17.61■□□□□ 0.41
CCNC-216ENST00000523961 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
CCNC-216ENST00000523961 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
CCNC-216ENST00000523961 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
CCNC-216ENST00000523961 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
CCNC-216ENST00000523961 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
CCNC-216ENST00000523961 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
CCNC-216ENST00000523961 TRPM3Q9HCF6 1732 aaPredicted RBP17.58■□□□□ 0.4
CCNC-216ENST00000523961 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
CCNC-216ENST00000523961 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
CCNC-216ENST00000523961 TMF1P82094 1093 aa17.56■□□□□ 0.4
CCNC-216ENST00000523961 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCNC-216ENST00000523961 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms