RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.48
VEGFA-225ENST00000523950 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.47
VEGFA-225ENST00000523950 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
VEGFA-225ENST00000523950 PRAM1Q96QH2 718 aa18■□□□□ 0.47
VEGFA-225ENST00000523950 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
VEGFA-225ENST00000523950 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
VEGFA-225ENST00000523950 HSPA1LP34931 641 aa17.99■□□□□ 0.47
VEGFA-225ENST00000523950 POGKQ9P215 609 aa17.99■□□□□ 0.47
VEGFA-225ENST00000523950 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
VEGFA-225ENST00000523950 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
VEGFA-225ENST00000523950 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
VEGFA-225ENST00000523950 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
VEGFA-225ENST00000523950 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
VEGFA-225ENST00000523950 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
VEGFA-225ENST00000523950 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
VEGFA-225ENST00000523950 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
VEGFA-225ENST00000523950 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
VEGFA-225ENST00000523950 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
VEGFA-225ENST00000523950 GPRASP1Q5JY77 1395 aa17.94■□□□□ 0.46
VEGFA-225ENST00000523950 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-225ENST00000523950 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
VEGFA-225ENST00000523950 COL16A1Q07092 1604 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-225ENST00000523950 ANKARQ7Z5J8 1434 aa17.92■□□□□ 0.46
VEGFA-225ENST00000523950 KIF1AQ12756 1690 aa17.92■□□□□ 0.46
VEGFA-225ENST00000523950 SAFB2Q14151 953 aaKnown RBP eCLIP17.91■□□□□ 0.46
VEGFA-225ENST00000523950 QRICH2Q9H0J4 1663 aa17.9■□□□□ 0.46
VEGFA-225ENST00000523950 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
VEGFA-225ENST00000523950 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
VEGFA-225ENST00000523950 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
VEGFA-225ENST00000523950 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
VEGFA-225ENST00000523950 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-225ENST00000523950 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
VEGFA-225ENST00000523950 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
VEGFA-225ENST00000523950 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
VEGFA-225ENST00000523950 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
VEGFA-225ENST00000523950 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
VEGFA-225ENST00000523950 JCADQ9P266 1359 aa17.86■□□□□ 0.45
VEGFA-225ENST00000523950 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
VEGFA-225ENST00000523950 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
VEGFA-225ENST00000523950 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
VEGFA-225ENST00000523950 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
VEGFA-225ENST00000523950 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-225ENST00000523950 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
VEGFA-225ENST00000523950 LRRC59Q96AG4 307 aaKnown RBP17.82■□□□□ 0.44
VEGFA-225ENST00000523950 ATP7BP35670 1465 aa17.82■□□□□ 0.44
VEGFA-225ENST00000523950 PHF8Q9UPP1 1060 aa17.81■□□□□ 0.44
VEGFA-225ENST00000523950 MED1Q15648 1581 aaPredicted RBP17.81■□□□□ 0.44
VEGFA-225ENST00000523950 PXDNQ92626 1479 aa17.81■□□□□ 0.44
VEGFA-225ENST00000523950 TOPAZ1Q8N9V7 1692 aa17.8■□□□□ 0.44
VEGFA-225ENST00000523950 CDK19Q9BWU1 502 aa17.8■□□□□ 0.44
VEGFA-225ENST00000523950 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
VEGFA-225ENST00000523950 PRR36Q9H6K5 1346 aa17.78■□□□□ 0.44
VEGFA-225ENST00000523950 FOXO3O43524 673 aa17.78■□□□□ 0.44
VEGFA-225ENST00000523950 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
VEGFA-225ENST00000523950 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
VEGFA-225ENST00000523950 DDX17Q92841 729 aaKnown RBP17.77■□□□□ 0.44
VEGFA-225ENST00000523950 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
VEGFA-225ENST00000523950 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-225ENST00000523950 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
VEGFA-225ENST00000523950 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
VEGFA-225ENST00000523950 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
VEGFA-225ENST00000523950 PSME1Q06323 249 aa17.74■□□□□ 0.43
VEGFA-225ENST00000523950 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
VEGFA-225ENST00000523950 KRT28Q7Z3Y7 464 aa17.73■□□□□ 0.43
VEGFA-225ENST00000523950 USP47Q96K76 1375 aa17.72■□□□□ 0.43
VEGFA-225ENST00000523950 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
VEGFA-225ENST00000523950 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-225ENST00000523950 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
VEGFA-225ENST00000523950 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-225ENST00000523950 ATAD2Q6PL18 1390 aa17.71■□□□□ 0.43
VEGFA-225ENST00000523950 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
VEGFA-225ENST00000523950 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
VEGFA-225ENST00000523950 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
VEGFA-225ENST00000523950 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
VEGFA-225ENST00000523950 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
VEGFA-225ENST00000523950 CABP2Q9NPB3 220 aa17.7■□□□□ 0.42
VEGFA-225ENST00000523950 LRP6O75581 1613 aa17.69■□□□□ 0.42
VEGFA-225ENST00000523950 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-225ENST00000523950 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
VEGFA-225ENST00000523950 ARHGEF10O15013 1369 aa17.68■□□□□ 0.42
VEGFA-225ENST00000523950 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
VEGFA-225ENST00000523950 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
VEGFA-225ENST00000523950 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-225ENST00000523950 TESK2Q96S53 571 aa17.67■□□□□ 0.42
VEGFA-225ENST00000523950 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-225ENST00000523950 ACEP12821 1306 aa17.67■□□□□ 0.42
VEGFA-225ENST00000523950 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
VEGFA-225ENST00000523950 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
VEGFA-225ENST00000523950 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
VEGFA-225ENST00000523950 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
VEGFA-225ENST00000523950 ABCA3Q99758 1704 aa17.63■□□□□ 0.41
VEGFA-225ENST00000523950 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
VEGFA-225ENST00000523950 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-225ENST00000523950 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-225ENST00000523950 TMF1P82094 1093 aa17.62■□□□□ 0.41
VEGFA-225ENST00000523950 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-225ENST00000523950 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
VEGFA-225ENST00000523950 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
VEGFA-225ENST00000523950 USP6P35125 1406 aa17.61■□□□□ 0.41
VEGFA-225ENST00000523950 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms