RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 ERVK-7P63135 1459 aa18.52■□□□□ 0.56
LSS-211ENST00000522411 WWC1Q8IX03 1113 aa18.52■□□□□ 0.55
LSS-211ENST00000522411 ABCA6Q8N139 1617 aa18.51■□□□□ 0.55
LSS-211ENST00000522411 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
LSS-211ENST00000522411 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
LSS-211ENST00000522411 KANK1Q14678 1352 aa18.51■□□□□ 0.55
LSS-211ENST00000522411 KIAA1210Q9ULL0 1709 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 SEC24BO95487 1268 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
LSS-211ENST00000522411 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 USP19O94966 1318 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 MLECQ14165 292 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
LSS-211ENST00000522411 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
LSS-211ENST00000522411 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
LSS-211ENST00000522411 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
LSS-211ENST00000522411 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
LSS-211ENST00000522411 KIF1BO60333 1816 aa18.46■□□□□ 0.55
LSS-211ENST00000522411 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
LSS-211ENST00000522411 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
LSS-211ENST00000522411 MROH2AA6NES4 1674 aa18.45■□□□□ 0.54
LSS-211ENST00000522411 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
LSS-211ENST00000522411 TNNQ9UQP3 1299 aa18.45■□□□□ 0.54
LSS-211ENST00000522411 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
LSS-211ENST00000522411 POLR3AO14802 1390 aaPredicted RBP18.44■□□□□ 0.54
LSS-211ENST00000522411 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
LSS-211ENST00000522411 MYOM2P54296 1465 aa18.44■□□□□ 0.54
LSS-211ENST00000522411 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
LSS-211ENST00000522411 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
LSS-211ENST00000522411 TCP11L2Q8N4U5 519 aa18.43■□□□□ 0.54
LSS-211ENST00000522411 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
LSS-211ENST00000522411 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
LSS-211ENST00000522411 MAPK8IP3Q9UPT6 1336 aa18.42■□□□□ 0.54
LSS-211ENST00000522411 CFAP65Q6ZU64 1925 aaKnown RBP18.42■□□□□ 0.54
LSS-211ENST00000522411 RLBP1P12271 317 aa18.42■□□□□ 0.54
LSS-211ENST00000522411 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
LSS-211ENST00000522411 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
LSS-211ENST00000522411 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
LSS-211ENST00000522411 NSD3Q9BZ95 1437 aa18.41■□□□□ 0.54
LSS-211ENST00000522411 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
LSS-211ENST00000522411 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
LSS-211ENST00000522411 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
LSS-211ENST00000522411 MTHFSP49914 203 aa18.37■□□□□ 0.53
LSS-211ENST00000522411 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
LSS-211ENST00000522411 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
LSS-211ENST00000522411 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
LSS-211ENST00000522411 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
LSS-211ENST00000522411 NOS1P29475 1434 aa18.36■□□□□ 0.53
LSS-211ENST00000522411 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
LSS-211ENST00000522411 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
LSS-211ENST00000522411 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
LSS-211ENST00000522411 BECN1Q14457 450 aa18.35■□□□□ 0.53
LSS-211ENST00000522411 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
LSS-211ENST00000522411 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
LSS-211ENST00000522411 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
LSS-211ENST00000522411 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
LSS-211ENST00000522411 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
LSS-211ENST00000522411 POGKQ9P215 609 aa18.34■□□□□ 0.53
LSS-211ENST00000522411 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
LSS-211ENST00000522411 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
LSS-211ENST00000522411 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LSS-211ENST00000522411 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
LSS-211ENST00000522411 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
LSS-211ENST00000522411 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
LSS-211ENST00000522411 PPLO60437 1756 aa18.3■□□□□ 0.52
LSS-211ENST00000522411 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
LSS-211ENST00000522411 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
LSS-211ENST00000522411 NPATQ14207 1427 aa18.3■□□□□ 0.52
LSS-211ENST00000522411 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
LSS-211ENST00000522411 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
LSS-211ENST00000522411 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
LSS-211ENST00000522411 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
LSS-211ENST00000522411 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
LSS-211ENST00000522411 AAMPQ13685 434 aa18.29■□□□□ 0.52
LSS-211ENST00000522411 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
LSS-211ENST00000522411 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
LSS-211ENST00000522411 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
LSS-211ENST00000522411 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
LSS-211ENST00000522411 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
LSS-211ENST00000522411 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.52
LSS-211ENST00000522411 SPRYD3Q8NCJ5 442 aa18.27■□□□□ 0.52
LSS-211ENST00000522411 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
LSS-211ENST00000522411 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
LSS-211ENST00000522411 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
LSS-211ENST00000522411 TSR2Q969E8 191 aaKnown RBP18.26■□□□□ 0.51
LSS-211ENST00000522411 ABCC3O15438 1527 aa18.26■□□□□ 0.51
LSS-211ENST00000522411 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
LSS-211ENST00000522411 ARHGEF40Q8TER5 1519 aa18.25■□□□□ 0.51
LSS-211ENST00000522411 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
LSS-211ENST00000522411 FTSJ3Q8IY81 847 aaKnown RBP18.24■□□□□ 0.51
LSS-211ENST00000522411 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
LSS-211ENST00000522411 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
LSS-211ENST00000522411 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
LSS-211ENST00000522411 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
LSS-211ENST00000522411 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
LSS-211ENST00000522411 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
LSS-211ENST00000522411 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
LSS-211ENST00000522411 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
LSS-211ENST00000522411 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
LSS-211ENST00000522411 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms