RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 ADAMTS13Q76LX8 1427 aa14.05□□□□□ -0.16
CTNNA1-221ENST00000520339 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
CTNNA1-221ENST00000520339 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-221ENST00000520339 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
CTNNA1-221ENST00000520339 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
CTNNA1-221ENST00000520339 PYGBP11216 843 aa14.03□□□□□ -0.16
CTNNA1-221ENST00000520339 MSH6P52701 1360 aa14.03□□□□□ -0.16
CTNNA1-221ENST00000520339 IQGAP3Q86VI3 1631 aa14.02□□□□□ -0.16
CTNNA1-221ENST00000520339 PIK3R4Q99570 1358 aa14.02□□□□□ -0.17
CTNNA1-221ENST00000520339 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
CTNNA1-221ENST00000520339 NAIPQ13075 1403 aa14.01□□□□□ -0.17
CTNNA1-221ENST00000520339 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
CTNNA1-221ENST00000520339 STK25O00506 426 aa14□□□□□ -0.17
CTNNA1-221ENST00000520339 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
CTNNA1-221ENST00000520339 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
CTNNA1-221ENST00000520339 AMOTL2Q9Y2J4 779 aa14□□□□□ -0.17
CTNNA1-221ENST00000520339 E9PCH4 1651 aa14□□□□□ -0.17
CTNNA1-221ENST00000520339 GCC2Q8IWJ2 1684 aa13.99□□□□□ -0.17
CTNNA1-221ENST00000520339 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
CTNNA1-221ENST00000520339 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
CTNNA1-221ENST00000520339 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
CTNNA1-221ENST00000520339 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
CTNNA1-221ENST00000520339 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
CTNNA1-221ENST00000520339 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
CTNNA1-221ENST00000520339 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-221ENST00000520339 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-221ENST00000520339 ATF3P18847 181 aa13.95□□□□□ -0.18
CTNNA1-221ENST00000520339 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-221ENST00000520339 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-221ENST00000520339 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
CTNNA1-221ENST00000520339 METP08581 1390 aa13.94□□□□□ -0.18
CTNNA1-221ENST00000520339 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
CTNNA1-221ENST00000520339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-221ENST00000520339 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-221ENST00000520339 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-221ENST00000520339 JCADQ9P266 1359 aa13.91□□□□□ -0.18
CTNNA1-221ENST00000520339 TRPM2O94759 1503 aa13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 MYO5BQ9ULV0 1848 aa13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 POTEAQ6S8J7 498 aa13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
CTNNA1-221ENST00000520339 RPGRIP1LQ68CZ1 1315 aa13.9□□□□□ -0.19
CTNNA1-221ENST00000520339 ROBO1Q9Y6N7 1651 aa13.89□□□□□ -0.19
CTNNA1-221ENST00000520339 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
CTNNA1-221ENST00000520339 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
CTNNA1-221ENST00000520339 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-221ENST00000520339 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
CTNNA1-221ENST00000520339 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
CTNNA1-221ENST00000520339 DCCP43146 1447 aa13.86□□□□□ -0.19
CTNNA1-221ENST00000520339 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
CTNNA1-221ENST00000520339 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
CTNNA1-221ENST00000520339 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
CTNNA1-221ENST00000520339 SPATA31A6Q5VVP1 1343 aa13.85□□□□□ -0.19
CTNNA1-221ENST00000520339 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
CTNNA1-221ENST00000520339 MST1RQ04912 1400 aa13.83□□□□□ -0.2
CTNNA1-221ENST00000520339 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.22e-14■■■□□ 15
CTNNA1-221ENST00000520339 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
CTNNA1-221ENST00000520339 ADGRL3Q9HAR2 1447 aa13.82□□□□□ -0.2
CTNNA1-221ENST00000520339 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-221ENST00000520339 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
CTNNA1-221ENST00000520339 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-221ENST00000520339 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
CTNNA1-221ENST00000520339 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-221ENST00000520339 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-221ENST00000520339 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
CTNNA1-221ENST00000520339 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
CTNNA1-221ENST00000520339 LRP6O75581 1613 aa13.79□□□□□ -0.2
CTNNA1-221ENST00000520339 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-221ENST00000520339 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
CTNNA1-221ENST00000520339 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
CTNNA1-221ENST00000520339 ASXL1Q8IXJ9 1541 aa13.78□□□□□ -0.2
CTNNA1-221ENST00000520339 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
CTNNA1-221ENST00000520339 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 C1orf167Q5SNV9 1468 aa13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 ZNF772Q68DY9 489 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
CTNNA1-221ENST00000520339 ANKRD30BQ9BXX2 1392 aa13.76□□□□□ -0.21
CTNNA1-221ENST00000520339 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
CTNNA1-221ENST00000520339 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
CTNNA1-221ENST00000520339 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
CTNNA1-221ENST00000520339 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
CTNNA1-221ENST00000520339 STK26Q9P289 416 aa13.74□□□□□ -0.21
CTNNA1-221ENST00000520339 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 PNPLA6Q8IY17 1366 aa13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
CTNNA1-221ENST00000520339 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms