RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
PABPC1-214ENST00000520142 AHDC1Q5TGY3 1603 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-214ENST00000520142 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
PABPC1-214ENST00000520142 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
PABPC1-214ENST00000520142 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
PABPC1-214ENST00000520142 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-214ENST00000520142 NHSL1Q5SYE7 1610 aa16.1■□□□□ 0.17
PABPC1-214ENST00000520142 PHLPP1O60346 1717 aa16.1■□□□□ 0.17
PABPC1-214ENST00000520142 PRAM1Q96QH2 718 aa16.09■□□□□ 0.17
PABPC1-214ENST00000520142 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-214ENST00000520142 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
PABPC1-214ENST00000520142 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
PABPC1-214ENST00000520142 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
PABPC1-214ENST00000520142 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
PABPC1-214ENST00000520142 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
PABPC1-214ENST00000520142 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
PABPC1-214ENST00000520142 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
PABPC1-214ENST00000520142 JCADQ9P266 1359 aa16.05■□□□□ 0.16
PABPC1-214ENST00000520142 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-214ENST00000520142 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
PABPC1-214ENST00000520142 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
PABPC1-214ENST00000520142 DDX17Q92841 729 aaKnown RBP16.02■□□□□ 0.16
PABPC1-214ENST00000520142 POGKQ9P215 609 aa16.02■□□□□ 0.16
PABPC1-214ENST00000520142 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
PABPC1-214ENST00000520142 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
PABPC1-214ENST00000520142 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
PABPC1-214ENST00000520142 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
PABPC1-214ENST00000520142 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
PABPC1-214ENST00000520142 GPRASP1Q5JY77 1395 aa16■□□□□ 0.15
PABPC1-214ENST00000520142 PXDNQ92626 1479 aa15.99■□□□□ 0.15
PABPC1-214ENST00000520142 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
PABPC1-214ENST00000520142 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
PABPC1-214ENST00000520142 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
PABPC1-214ENST00000520142 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-214ENST00000520142 LRP6O75581 1613 aa15.97■□□□□ 0.15
PABPC1-214ENST00000520142 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-214ENST00000520142 PRR36Q9H6K5 1346 aa15.97■□□□□ 0.15
PABPC1-214ENST00000520142 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-214ENST00000520142 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-214ENST00000520142 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
PABPC1-214ENST00000520142 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
PABPC1-214ENST00000520142 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
PABPC1-214ENST00000520142 NPHP3Q7Z494 1330 aa15.96■□□□□ 0.15
PABPC1-214ENST00000520142 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
PABPC1-214ENST00000520142 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
PABPC1-214ENST00000520142 FOXO3O43524 673 aa15.96■□□□□ 0.15
PABPC1-214ENST00000520142 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
PABPC1-214ENST00000520142 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
PABPC1-214ENST00000520142 ATP7BP35670 1465 aa15.93■□□□□ 0.14
PABPC1-214ENST00000520142 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
PABPC1-214ENST00000520142 ROCK2O75116 1388 aaKnown RBP15.93■□□□□ 0.14
PABPC1-214ENST00000520142 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
PABPC1-214ENST00000520142 COL22A1Q8NFW1 1626 aaPredicted RBP15.93■□□□□ 0.14
PABPC1-214ENST00000520142 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
PABPC1-214ENST00000520142 CDK19Q9BWU1 502 aa15.9■□□□□ 0.14
PABPC1-214ENST00000520142 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
PABPC1-214ENST00000520142 XPCQ01831 940 aaPredicted RBP15.89■□□□□ 0.13
PABPC1-214ENST00000520142 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
PABPC1-214ENST00000520142 TIMELESSQ9UNS1 1208 aa15.89■□□□□ 0.13
PABPC1-214ENST00000520142 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
PABPC1-214ENST00000520142 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
PABPC1-214ENST00000520142 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
PABPC1-214ENST00000520142 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
PABPC1-214ENST00000520142 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
PABPC1-214ENST00000520142 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
PABPC1-214ENST00000520142 TRPM3Q9HCF6 1732 aaPredicted RBP15.86■□□□□ 0.13
PABPC1-214ENST00000520142 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
PABPC1-214ENST00000520142 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
PABPC1-214ENST00000520142 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
PABPC1-214ENST00000520142 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
PABPC1-214ENST00000520142 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
PABPC1-214ENST00000520142 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
PABPC1-214ENST00000520142 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-214ENST00000520142 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-214ENST00000520142 PSME1Q06323 249 aa15.84■□□□□ 0.13
PABPC1-214ENST00000520142 POTEAQ6S8J7 498 aa15.84■□□□□ 0.13
PABPC1-214ENST00000520142 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-214ENST00000520142 ALS2Q96Q42 1657 aa15.83■□□□□ 0.12
PABPC1-214ENST00000520142 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
PABPC1-214ENST00000520142 ACEP12821 1306 aa15.8■□□□□ 0.12
PABPC1-214ENST00000520142 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
PABPC1-214ENST00000520142 PPIP5K1Q6PFW1 1433 aa15.79■□□□□ 0.12
PABPC1-214ENST00000520142 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
PABPC1-214ENST00000520142 SRPK2P78362 688 aaKnown RBP15.79■□□□□ 0.12
PABPC1-214ENST00000520142 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
PABPC1-214ENST00000520142 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
PABPC1-214ENST00000520142 AFF2P51816 1311 aa15.78■□□□□ 0.12
PABPC1-214ENST00000520142 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
PABPC1-214ENST00000520142 ZNF772Q68DY9 489 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-214ENST00000520142 FNBP4Q8N3X1 1017 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-214ENST00000520142 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-214ENST00000520142 TESK2Q96S53 571 aa15.78■□□□□ 0.12
PABPC1-214ENST00000520142 ABCA3Q99758 1704 aa15.77■□□□□ 0.12
PABPC1-214ENST00000520142 ADAMTS2O95450 1211 aa15.77■□□□□ 0.12
PABPC1-214ENST00000520142 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
PABPC1-214ENST00000520142 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
PABPC1-214ENST00000520142 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
PABPC1-214ENST00000520142 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
PABPC1-214ENST00000520142 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
PABPC1-214ENST00000520142 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms