RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 PRAM1Q96QH2 718 aa29.37■■■□□ 2.29
TNFRSF10B-204ENST00000519028 ROBO1Q9Y6N7 1651 aa29.35■■■□□ 2.29
TNFRSF10B-204ENST00000519028 NBPF8Q3BBV2 869 aa29.35■■■□□ 2.29
TNFRSF10B-204ENST00000519028 MST1RQ04912 1400 aa29.35■■■□□ 2.29
TNFRSF10B-204ENST00000519028 POGKQ9P215 609 aa29.33■■■□□ 2.29
TNFRSF10B-204ENST00000519028 SAFB2Q14151 953 aaKnown RBP eCLIP29.31■■■□□ 2.28
TNFRSF10B-204ENST00000519028 CCER1Q8TC90 406 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF10B-204ENST00000519028 TRPM1Q7Z4N2 1603 aa29.3■■■□□ 2.28
TNFRSF10B-204ENST00000519028 BRINP3Q76B58 766 aa29.28■■■□□ 2.28
TNFRSF10B-204ENST00000519028 CDC42BPGQ6DT37 1551 aa29.27■■■□□ 2.28
TNFRSF10B-204ENST00000519028 ARHGEF28Q8N1W1 1705 aaKnown RBP29.26■■■□□ 2.27
TNFRSF10B-204ENST00000519028 C1orf167Q5SNV9 1468 aa29.26■■■□□ 2.27
TNFRSF10B-204ENST00000519028 TIMELESSQ9UNS1 1208 aa29.24■■■□□ 2.27
TNFRSF10B-204ENST00000519028 ROCK2O75116 1388 aaKnown RBP29.22■■■□□ 2.27
TNFRSF10B-204ENST00000519028 ORAI2Q96SN7 254 aa29.21■■■□□ 2.27
TNFRSF10B-204ENST00000519028 MINK1Q8N4C8 1332 aaPredicted RBP29.2■■■□□ 2.27
TNFRSF10B-204ENST00000519028 HIRIP3Q9BW71 556 aaPredicted RBP29.2■■■□□ 2.26
TNFRSF10B-204ENST00000519028 NUTM2FA1L443 756 aa29.19■■■□□ 2.26
TNFRSF10B-204ENST00000519028 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
TNFRSF10B-204ENST00000519028 FMN2Q9NZ56 1722 aa29.18■■■□□ 2.26
TNFRSF10B-204ENST00000519028 ADGRB2O60241 1585 aa29.17■■■□□ 2.26
TNFRSF10B-204ENST00000519028 PHLPP1O60346 1717 aa29.15■■■□□ 2.26
TNFRSF10B-204ENST00000519028 ESCO1Q5FWF5 840 aa29.15■■■□□ 2.26
TNFRSF10B-204ENST00000519028 AHDC1Q5TGY3 1603 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF10B-204ENST00000519028 WASLO00401 505 aaPredicted RBP29.14■■■□□ 2.26
TNFRSF10B-204ENST00000519028 RALGAPBQ86X10 1494 aa29.14■■■□□ 2.26
TNFRSF10B-204ENST00000519028 DDX17Q92841 729 aaKnown RBP29.13■■■□□ 2.25
TNFRSF10B-204ENST00000519028 CENPJQ9HC77 1338 aaPredicted RBP29.13■■■□□ 2.25
TNFRSF10B-204ENST00000519028 CARD11Q9BXL7 1154 aa29.12■■■□□ 2.25
TNFRSF10B-204ENST00000519028 COL16A1Q07092 1604 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF10B-204ENST00000519028 NHSL1Q5SYE7 1610 aa29.1■■■□□ 2.25
TNFRSF10B-204ENST00000519028 RGPD8O14715 1765 aaPredicted RBP29.09■■■□□ 2.25
TNFRSF10B-204ENST00000519028 USP32Q8NFA0 1604 aa29.06■■■□□ 2.24
TNFRSF10B-204ENST00000519028 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
TNFRSF10B-204ENST00000519028 ANKARQ7Z5J8 1434 aa29.05■■■□□ 2.24
TNFRSF10B-204ENST00000519028 PRR36Q9H6K5 1346 aa29.04■■■□□ 2.24
TNFRSF10B-204ENST00000519028 FOXO3O43524 673 aa29.04■■■□□ 2.24
TNFRSF10B-204ENST00000519028 EIF3AQ14152 1382 aaKnown RBP29.03■■■□□ 2.24
TNFRSF10B-204ENST00000519028 QRICH2Q9H0J4 1663 aa29.03■■■□□ 2.24
TNFRSF10B-204ENST00000519028 SOS2Q07890 1332 aaPredicted RBP29.03■■■□□ 2.24
TNFRSF10B-204ENST00000519028 PHF8Q9UPP1 1060 aa29.03■■■□□ 2.24
TNFRSF10B-204ENST00000519028 TULP4Q9NRJ4 1543 aa29.03■■■□□ 2.24
TNFRSF10B-204ENST00000519028 JCADQ9P266 1359 aa29.01■■■□□ 2.24
TNFRSF10B-204ENST00000519028 LRRC59Q96AG4 307 aaKnown RBP29.01■■■□□ 2.23
TNFRSF10B-204ENST00000519028 NPHP3Q7Z494 1330 aa29■■■□□ 2.23
TNFRSF10B-204ENST00000519028 NUDT16Q96DE0 195 aaKnown RBP29■■■□□ 2.23
TNFRSF10B-204ENST00000519028 PMFBP1Q8TBY8 1022 aa28.98■■■□□ 2.23
TNFRSF10B-204ENST00000519028 KIF1AQ12756 1690 aa28.98■■■□□ 2.23
TNFRSF10B-204ENST00000519028 ATP7BP35670 1465 aa28.96■■■□□ 2.23
TNFRSF10B-204ENST00000519028 PXDNQ92626 1479 aa28.96■■■□□ 2.23
TNFRSF10B-204ENST00000519028 XPCQ01831 940 aaPredicted RBP28.95■■■□□ 2.22
TNFRSF10B-204ENST00000519028 CABP2Q9NPB3 220 aa28.94■■■□□ 2.22
TNFRSF10B-204ENST00000519028 SRPK2P78362 688 aaKnown RBP28.93■■■□□ 2.22
TNFRSF10B-204ENST00000519028 KRT28Q7Z3Y7 464 aa28.93■■■□□ 2.22
TNFRSF10B-204ENST00000519028 CCDC61Q9Y6R9 512 aa28.93■■■□□ 2.22
TNFRSF10B-204ENST00000519028 EVC2Q86UK5 1308 aa28.93■■■□□ 2.22
TNFRSF10B-204ENST00000519028 SHPRHQ149N8 1683 aa28.92■■■□□ 2.22
TNFRSF10B-204ENST00000519028 SBNO2Q9Y2G9 1366 aa28.91■■■□□ 2.22
TNFRSF10B-204ENST00000519028 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
TNFRSF10B-204ENST00000519028 PSME1Q06323 249 aa28.9■■■□□ 2.22
TNFRSF10B-204ENST00000519028 MED1Q15648 1581 aaPredicted RBP28.9■■■□□ 2.22
TNFRSF10B-204ENST00000519028 SPATA31A6Q5VVP1 1343 aa28.9■■■□□ 2.22
TNFRSF10B-204ENST00000519028 PNPLA6Q8IY17 1366 aa28.89■■■□□ 2.22
TNFRSF10B-204ENST00000519028 ITSN1Q15811 1721 aa28.88■■■□□ 2.21
TNFRSF10B-204ENST00000519028 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
TNFRSF10B-204ENST00000519028 NGDNQ8NEJ9 315 aaKnown RBP28.86■■■□□ 2.21
TNFRSF10B-204ENST00000519028 TESK2Q96S53 571 aa28.86■■■□□ 2.21
TNFRSF10B-204ENST00000519028 TOPAZ1Q8N9V7 1692 aa28.86■■■□□ 2.21
TNFRSF10B-204ENST00000519028 SPATA31A3Q5VYP0 1347 aa28.85■■■□□ 2.21
TNFRSF10B-204ENST00000519028 USP47Q96K76 1375 aa28.85■■■□□ 2.21
TNFRSF10B-204ENST00000519028 DISP3Q9P2K9 1392 aa28.83■■■□□ 2.21
TNFRSF10B-204ENST00000519028 ACEP12821 1306 aa28.82■■■□□ 2.2
TNFRSF10B-204ENST00000519028 POLR3AO14802 1390 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF10B-204ENST00000519028 PPIP5K1Q6PFW1 1433 aa28.82■■■□□ 2.2
TNFRSF10B-204ENST00000519028 SBNO1A3KN83 1393 aa28.81■■■□□ 2.2
TNFRSF10B-204ENST00000519028 CABP1Q9NZU7 370 aa28.81■■■□□ 2.2
TNFRSF10B-204ENST00000519028 LRP6O75581 1613 aa28.8■■■□□ 2.2
TNFRSF10B-204ENST00000519028 NUTM2BA6NNL0 878 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF10B-204ENST00000519028 NUTM2EB1AL46 878 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF10B-204ENST00000519028 NUTM2AQ8IVF1 878 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF10B-204ENST00000519028 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
TNFRSF10B-204ENST00000519028 COL22A1Q8NFW1 1626 aaPredicted RBP28.77■■■□□ 2.2
TNFRSF10B-204ENST00000519028 TRPM3Q9HCF6 1732 aaPredicted RBP28.77■■■□□ 2.2
TNFRSF10B-204ENST00000519028 TNS3Q68CZ2 1445 aa28.77■■■□□ 2.2
TNFRSF10B-204ENST00000519028 PUS7Q96PZ0 661 aaKnown RBP28.75■■■□□ 2.19
TNFRSF10B-204ENST00000519028 ATAD2Q6PL18 1390 aa28.75■■■□□ 2.19
TNFRSF10B-204ENST00000519028 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
TNFRSF10B-204ENST00000519028 PHF23Q9BUL5 403 aaPredicted RBP28.72■■■□□ 2.19
TNFRSF10B-204ENST00000519028 RGS17Q9UGC6 210 aaPredicted RBP28.72■■■□□ 2.19
TNFRSF10B-204ENST00000519028 PAK3O75914 559 aaPredicted RBP28.71■■■□□ 2.19
TNFRSF10B-204ENST00000519028 ARHGEF10O15013 1369 aa28.71■■■□□ 2.19
TNFRSF10B-204ENST00000519028 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.18
TNFRSF10B-204ENST00000519028 ALS2Q96Q42 1657 aa28.7■■■□□ 2.18
TNFRSF10B-204ENST00000519028 EIF4G2P78344 907 aaKnown RBP eCLIP28.68■■■□□ 2.18
TNFRSF10B-204ENST00000519028 TMF1P82094 1093 aa28.68■■■□□ 2.18
TNFRSF10B-204ENST00000519028 ADAMTS2O95450 1211 aa28.67■■■□□ 2.18
TNFRSF10B-204ENST00000519028 CABLES1Q8TDN4 633 aa28.66■■■□□ 2.18
TNFRSF10B-204ENST00000519028 ZNF692Q9BU19 519 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF10B-204ENST00000519028 HSPA5P11021 654 aaKnown RBP28.65■■■□□ 2.18
TNFRSF10B-204ENST00000519028 SLC12A5Q9H2X9 1139 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms