RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
PCM1-205ENST00000517836 TRIM67Q6ZTA4 783 aa9.79□□□□□ -0.84
PCM1-205ENST00000517836 HLA-CQ95604 372 aa9.79□□□□□ -0.84
PCM1-205ENST00000517836 PRDM9Q9NQV7 894 aa9.79□□□□□ -0.84
PCM1-205ENST00000517836 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
PCM1-205ENST00000517836 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
PCM1-205ENST00000517836 RNF19BQ6ZMZ0 732 aa9.78□□□□□ -0.84
PCM1-205ENST00000517836 NRG2O14511 850 aaPredicted RBP9.77□□□□□ -0.85
PCM1-205ENST00000517836 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
PCM1-205ENST00000517836 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
PCM1-205ENST00000517836 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
PCM1-205ENST00000517836 BRICD5Q6PL45 260 aa9.76□□□□□ -0.85
PCM1-205ENST00000517836 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
PCM1-205ENST00000517836 KDM4AO75164 1064 aa9.74□□□□□ -0.85
PCM1-205ENST00000517836 SH3D19Q5HYK7 790 aa9.74□□□□□ -0.85
PCM1-205ENST00000517836 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
PCM1-205ENST00000517836 FCF1Q9Y324 198 aaKnown RBP9.74□□□□□ -0.85
PCM1-205ENST00000517836 TNFRSF10AO00220 468 aa9.73□□□□□ -0.85
PCM1-205ENST00000517836 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
PCM1-205ENST00000517836 ZNF697Q5TEC3 545 aa9.73□□□□□ -0.85
PCM1-205ENST00000517836 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
PCM1-205ENST00000517836 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
PCM1-205ENST00000517836 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
PCM1-205ENST00000517836 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
PCM1-205ENST00000517836 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
PCM1-205ENST00000517836 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
PCM1-205ENST00000517836 HOXA2O43364 376 aa9.68□□□□□ -0.86
PCM1-205ENST00000517836 GDF9O60383 454 aa9.68□□□□□ -0.86
PCM1-205ENST00000517836 FOXC1Q12948 553 aa9.68□□□□□ -0.86
PCM1-205ENST00000517836 C14orf37Q86TY3 774 aa9.68□□□□□ -0.86
PCM1-205ENST00000517836 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
PCM1-205ENST00000517836 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
PCM1-205ENST00000517836 Q3C1V9 767 aa9.66□□□□□ -0.86
PCM1-205ENST00000517836 MSS51Q4VC12 460 aa9.66□□□□□ -0.86
PCM1-205ENST00000517836 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
PCM1-205ENST00000517836 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
PCM1-205ENST00000517836 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
PCM1-205ENST00000517836 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
PCM1-205ENST00000517836 USP46P62068 366 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 PRR20EP86478 221 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 PRR20CP86479 221 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 PRR20DP86480 221 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 PRR20BP86481 221 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 PRR20AP86496 221 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
PCM1-205ENST00000517836 RPIAP49247 311 aa9.63□□□□□ -0.87
PCM1-205ENST00000517836 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 NDUFV2P19404 249 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 MMP16P51512 607 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
PCM1-205ENST00000517836 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
PCM1-205ENST00000517836 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
PCM1-205ENST00000517836 GJA5P36382 358 aa9.61□□□□□ -0.87
PCM1-205ENST00000517836 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
PCM1-205ENST00000517836 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
PCM1-205ENST00000517836 MYT1Q01538 1121 aa9.6□□□□□ -0.87
PCM1-205ENST00000517836 FLIIQ13045 1269 aa9.6□□□□□ -0.87
PCM1-205ENST00000517836 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
PCM1-205ENST00000517836 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
PCM1-205ENST00000517836 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
PCM1-205ENST00000517836 SPTLC1O15269 473 aa9.59□□□□□ -0.87
PCM1-205ENST00000517836 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
PCM1-205ENST00000517836 MOXD2PA6NHM9 499 aa9.58□□□□□ -0.88
PCM1-205ENST00000517836 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
PCM1-205ENST00000517836 DGAT1O75907 488 aa9.58□□□□□ -0.88
PCM1-205ENST00000517836 FDX1P10109 184 aa9.58□□□□□ -0.88
PCM1-205ENST00000517836 ZNF787Q6DD87 383 aa9.58□□□□□ -0.88
PCM1-205ENST00000517836 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
PCM1-205ENST00000517836 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
PCM1-205ENST00000517836 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
PCM1-205ENST00000517836 TRIM32Q13049 653 aa9.56□□□□□ -0.88
PCM1-205ENST00000517836 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
PCM1-205ENST00000517836 POTECB2RU33 542 aa9.55□□□□□ -0.88
PCM1-205ENST00000517836 JUNDP17535 347 aa9.55□□□□□ -0.88
PCM1-205ENST00000517836 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
PCM1-205ENST00000517836 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
PCM1-205ENST00000517836 RETREG3Q86VR2 466 aa9.54□□□□□ -0.88
PCM1-205ENST00000517836 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
PCM1-205ENST00000517836 PTCRAQ6ISU1 281 aaPredicted RBP9.53□□□□□ -0.88
PCM1-205ENST00000517836 SKOR1P84550 965 aa9.52□□□□□ -0.89
PCM1-205ENST00000517836 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
PCM1-205ENST00000517836 ZNF775Q96BV0 537 aaPredicted RBP9.52□□□□□ -0.89
PCM1-205ENST00000517836 RFC5P40937 340 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 AAASQ9NRG9 546 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 DACH1Q9UI36 760 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
PCM1-205ENST00000517836 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
PCM1-205ENST00000517836 WNT7AO00755 349 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 LILRB3O75022 631 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
PCM1-205ENST00000517836 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
PCM1-205ENST00000517836 ZMYND15Q9H091 742 aa9.49□□□□□ -0.89
PCM1-205ENST00000517836 J3QL48 77 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms