RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 PLEKHD1A6NEE1 506 aa8.55□□□□□ -1.04
CD47-205ENST00000517766 ATP10BO94823 1461 aa8.55□□□□□ -1.04
CD47-205ENST00000517766 UACAQ9BZF9 1416 aa8.54□□□□□ -1.04
CD47-205ENST00000517766 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
CD47-205ENST00000517766 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
CD47-205ENST00000517766 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
CD47-205ENST00000517766 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
CD47-205ENST00000517766 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 GOLGA8CPA6NN73 597 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 ZMYND10O75800 440 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 ABCC2Q92887 1545 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 PTPRKQ15262 1439 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
CD47-205ENST00000517766 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
CD47-205ENST00000517766 GPATCH8Q9UKJ3 1502 aaKnown RBP8.52□□□□□ -1.05
CD47-205ENST00000517766 NAIPQ13075 1403 aa8.52□□□□□ -1.05
CD47-205ENST00000517766 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 MAPKBP1O60336 1514 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 KCNC4Q03721 635 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 NEUROD2Q15784 382 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 DAPK1P53355 1430 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 ERCC6L2Q5T890 1561 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 UHRF1BP1LA0JNW5 1464 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 ABCC10Q5T3U5 1492 aa8.51□□□□□ -1.05
CD47-205ENST00000517766 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
CD47-205ENST00000517766 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
CD47-205ENST00000517766 DDX12PQ92771 950 aa8.5□□□□□ -1.05
CD47-205ENST00000517766 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
CD47-205ENST00000517766 CAMSAP2Q08AD1 1489 aa8.5□□□□□ -1.05
CD47-205ENST00000517766 MYO5CQ9NQX4 1742 aa8.49□□□□□ -1.05
CD47-205ENST00000517766 CDC42BPBQ9Y5S2 1711 aa8.49□□□□□ -1.05
CD47-205ENST00000517766 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
CD47-205ENST00000517766 CFDP1Q9UEE9 299 aaPredicted RBP8.49□□□□□ -1.05
CD47-205ENST00000517766 TIMELESSQ9UNS1 1208 aa8.49□□□□□ -1.05
CD47-205ENST00000517766 ZCCHC11Q5TAX3 1644 aaKnown RBP8.49□□□□□ -1.05
CD47-205ENST00000517766 PREX2Q70Z35 1606 aa8.49□□□□□ -1.05
CD47-205ENST00000517766 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
CD47-205ENST00000517766 ABCC5O15440 1437 aa8.47□□□□□ -1.05
CD47-205ENST00000517766 NUTM2FA1L443 756 aa8.47□□□□□ -1.05
CD47-205ENST00000517766 EVI5O60447 810 aa8.47□□□□□ -1.05
CD47-205ENST00000517766 ARHGEF5Q12774 1597 aa8.47□□□□□ -1.05
CD47-205ENST00000517766 ADGRL2O95490 1459 aa8.46□□□□□ -1.05
CD47-205ENST00000517766 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
CD47-205ENST00000517766 KDM5BQ9UGL1 1544 aa8.46□□□□□ -1.05
CD47-205ENST00000517766 TBC1D12O60347 775 aa8.45□□□□□ -1.06
CD47-205ENST00000517766 OSBPP22059 807 aa8.45□□□□□ -1.06
CD47-205ENST00000517766 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
CD47-205ENST00000517766 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
CD47-205ENST00000517766 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
CD47-205ENST00000517766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD47-205ENST00000517766 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
CD47-205ENST00000517766 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
CD47-205ENST00000517766 KCNH8Q96L42 1107 aa8.44□□□□□ -1.06
CD47-205ENST00000517766 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
CD47-205ENST00000517766 KDM6BO15054 1643 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 ZNF644Q9H582 1327 aaPredicted RBP8.43□□□□□ -1.06
CD47-205ENST00000517766 ANKRD30AQ9BXX3 1397 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 PLEKHH2Q8IVE3 1493 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 TTC37Q6PGP7 1564 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
CD47-205ENST00000517766 GPR37O15354 613 aa8.42□□□□□ -1.06
CD47-205ENST00000517766 AK7Q96M32 723 aa8.42□□□□□ -1.06
CD47-205ENST00000517766 GPBP1L1Q9HC44 474 aaPredicted RBP8.42□□□□□ -1.06
CD47-205ENST00000517766 ZNF777Q9ULD5 760 aaPredicted RBP8.42□□□□□ -1.06
CD47-205ENST00000517766 NCOA1Q15788 1441 aa8.42□□□□□ -1.06
CD47-205ENST00000517766 ARHGAP5Q13017 1502 aa8.42□□□□□ -1.06
CD47-205ENST00000517766 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
CD47-205ENST00000517766 ARAP3Q8WWN8 1544 aa8.41□□□□□ -1.06
CD47-205ENST00000517766 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
CD47-205ENST00000517766 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
CD47-205ENST00000517766 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
CD47-205ENST00000517766 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
CD47-205ENST00000517766 PTCD2Q8WV60 388 aaKnown RBP8.41□□□□□ -1.06
CD47-205ENST00000517766 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
CD47-205ENST00000517766 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
CD47-205ENST00000517766 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
CD47-205ENST00000517766 MBD5Q9P267 1494 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 C9orf84Q5VXU9 1444 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 KIAA1107Q9UPP5 1409 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 TONSLQ96HA7 1378 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 FECHP22830 423 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 NEUROD1Q13562 356 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 SIN3AQ96ST3 1273 aa8.39□□□□□ -1.07
CD47-205ENST00000517766 PLCH2O75038 1416 aa8.38□□□□□ -1.07
CD47-205ENST00000517766 TRIM66O15016 1216 aa8.38□□□□□ -1.07
CD47-205ENST00000517766 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
CD47-205ENST00000517766 MPHOSPH9Q99550 1183 aa8.38□□□□□ -1.07
CD47-205ENST00000517766 WDR7Q9Y4E6 1490 aa8.38□□□□□ -1.07
CD47-205ENST00000517766 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 ABCA9Q8IUA7 1624 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 PLXNC1O60486 1568 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 WIPF1O43516 503 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 BCAMP50895 628 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 SYCP2Q9BX26 1530 aa8.37□□□□□ -1.07
CD47-205ENST00000517766 ABCC1P33527 1531 aa8.36□□□□□ -1.07
CD47-205ENST00000517766 KDM5DQ9BY66 1539 aa8.36□□□□□ -1.07
CD47-205ENST00000517766 PPP1R15AO75807 674 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms