RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
LINC00534-201ENST00000517400 NUTM2DQ5VT03 806 aaPredicted RBP8.72□□□□□ -1.01
LINC00534-201ENST00000517400 NUTM2AQ8IVF1 878 aaPredicted RBP8.72□□□□□ -1.01
LINC00534-201ENST00000517400 HCSTQ9UBK5 93 aa8.72□□□□□ -1.01
LINC00534-201ENST00000517400 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
LINC00534-201ENST00000517400 MTMR2Q13614 643 aa8.71□□□□□ -1.02
LINC00534-201ENST00000517400 MORN1Q5T089 497 aa8.71□□□□□ -1.02
LINC00534-201ENST00000517400 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
LINC00534-201ENST00000517400 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
LINC00534-201ENST00000517400 SOCS7O14512 581 aa8.68□□□□□ -1.02
LINC00534-201ENST00000517400 APLP1P51693 650 aa8.68□□□□□ -1.02
LINC00534-201ENST00000517400 PUS10Q3MIT2 529 aaKnown RBP8.68□□□□□ -1.02
LINC00534-201ENST00000517400 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
LINC00534-201ENST00000517400 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
LINC00534-201ENST00000517400 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
LINC00534-201ENST00000517400 Q3C1V9 767 aa8.67□□□□□ -1.02
LINC00534-201ENST00000517400 SNRKQ9NRH2 765 aa8.67□□□□□ -1.02
LINC00534-201ENST00000517400 WBP1LQ9NX94 342 aa8.67□□□□□ -1.02
LINC00534-201ENST00000517400 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
LINC00534-201ENST00000517400 A6NJR5 290 aa8.66□□□□□ -1.02
LINC00534-201ENST00000517400 AP1G2O75843 785 aa8.66□□□□□ -1.02
LINC00534-201ENST00000517400 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
LINC00534-201ENST00000517400 NYAP1Q6ZVC0 841 aa8.65□□□□□ -1.02
LINC00534-201ENST00000517400 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
LINC00534-201ENST00000517400 CFAP99D6REC4 459 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 MTMR14Q8NCE2 650 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
LINC00534-201ENST00000517400 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
LINC00534-201ENST00000517400 NR1I2O75469 434 aa8.63□□□□□ -1.03
LINC00534-201ENST00000517400 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
LINC00534-201ENST00000517400 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
LINC00534-201ENST00000517400 HELBQ8NG08 1087 aaPredicted RBP8.63□□□□□ -1.03
LINC00534-201ENST00000517400 APBB1O00213 710 aa8.62□□□□□ -1.03
LINC00534-201ENST00000517400 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
LINC00534-201ENST00000517400 RAD21O60216 631 aa8.62□□□□□ -1.03
LINC00534-201ENST00000517400 CTDSPL2Q05D32 466 aa8.62□□□□□ -1.03
LINC00534-201ENST00000517400 DESI1Q6ICB0 168 aa8.62□□□□□ -1.03
LINC00534-201ENST00000517400 PRR7Q8TB68 274 aa8.62□□□□□ -1.03
LINC00534-201ENST00000517400 BLOC1S3Q6QNY0 202 aa8.61□□□□□ -1.03
LINC00534-201ENST00000517400 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
LINC00534-201ENST00000517400 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
LINC00534-201ENST00000517400 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
LINC00534-201ENST00000517400 FMNL1O95466 1100 aaPredicted RBP8.6□□□□□ -1.03
LINC00534-201ENST00000517400 PTPN5P54829 565 aa8.6□□□□□ -1.03
LINC00534-201ENST00000517400 POM121Q96HA1 1249 aa8.6□□□□□ -1.03
LINC00534-201ENST00000517400 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
LINC00534-201ENST00000517400 TRAK2O60296 914 aa8.59□□□□□ -1.03
LINC00534-201ENST00000517400 FNBP4Q8N3X1 1017 aaPredicted RBP8.59□□□□□ -1.03
LINC00534-201ENST00000517400 TSC1Q92574 1164 aa8.59□□□□□ -1.03
LINC00534-201ENST00000517400 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
LINC00534-201ENST00000517400 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
LINC00534-201ENST00000517400 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
LINC00534-201ENST00000517400 LRRN4Q8WUT4 740 aa8.56□□□□□ -1.04
LINC00534-201ENST00000517400 GDPD2Q9HCC8 539 aa8.56□□□□□ -1.04
LINC00534-201ENST00000517400 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
LINC00534-201ENST00000517400 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
LINC00534-201ENST00000517400 COPS2P61201 443 aa8.55□□□□□ -1.04
LINC00534-201ENST00000517400 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
LINC00534-201ENST00000517400 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
LINC00534-201ENST00000517400 ZPR1O75312 459 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 MSS51Q4VC12 460 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 SPSB2Q99619 263 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 MTRQ99707 1265 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 TBC1D2BQ9UPU7 963 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
LINC00534-201ENST00000517400 JUNDP17535 347 aa8.53□□□□□ -1.04
LINC00534-201ENST00000517400 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
LINC00534-201ENST00000517400 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
LINC00534-201ENST00000517400 WWC1Q8IX03 1113 aa8.52□□□□□ -1.05
LINC00534-201ENST00000517400 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
LINC00534-201ENST00000517400 PTPRNQ16849 979 aa8.51□□□□□ -1.05
LINC00534-201ENST00000517400 IFFO2Q5TF58 517 aa8.51□□□□□ -1.05
LINC00534-201ENST00000517400 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
LINC00534-201ENST00000517400 ADH1BP00325 375 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 ABL2P42684 1182 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 MMP16P51512 607 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 NR6A1Q15406 480 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
LINC00534-201ENST00000517400 ZNF330Q9Y3S2 320 aaPredicted RBP8.5□□□□□ -1.05
LINC00534-201ENST00000517400 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
LINC00534-201ENST00000517400 GPR37L1O60883 481 aa8.49□□□□□ -1.05
LINC00534-201ENST00000517400 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
LINC00534-201ENST00000517400 IRF5Q13568 498 aa8.48□□□□□ -1.05
LINC00534-201ENST00000517400 ZNF516Q92618 1163 aa8.48□□□□□ -1.05
LINC00534-201ENST00000517400 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
LINC00534-201ENST00000517400 TLL1O43897 1013 aa8.47□□□□□ -1.05
LINC00534-201ENST00000517400 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
LINC00534-201ENST00000517400 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
LINC00534-201ENST00000517400 ABCC9O60706 1549 aa8.46□□□□□ -1.05
LINC00534-201ENST00000517400 CCNYL3P0C7X3 344 aa8.46□□□□□ -1.06
LINC00534-201ENST00000517400 PNMA1Q8ND90 353 aa8.46□□□□□ -1.06
LINC00534-201ENST00000517400 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.06
LINC00534-201ENST00000517400 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
LINC00534-201ENST00000517400 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
LINC00534-201ENST00000517400 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
LINC00534-201ENST00000517400 A0A0G2JS52 829 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms