RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
RNU6-27P-201ENST00000516146 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
RNU6-27P-201ENST00000516146 HMX1Q9NP08 348 aaPredicted RBP6.41□□□□□ -1.38
RNU6-27P-201ENST00000516146 PCDHGC3Q9UN70 934 aa6.41□□□□□ -1.38
RNU6-27P-201ENST00000516146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 C6orf229H3BNL8 230 aa6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 HOXB1P14653 301 aaPredicted RBP6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 GUCA2AQ02747 115 aa6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 CFAP70Q5T0N1 1121 aa6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 SLF2Q8IX21 1173 aa6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 ADAMTS19Q8TE59 1207 aa6.4□□□□□ -1.38
RNU6-27P-201ENST00000516146 SLC10A3P09131 477 aa6.39□□□□□ -1.39
RNU6-27P-201ENST00000516146 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
RNU6-27P-201ENST00000516146 LRRN4Q8WUT4 740 aa6.39□□□□□ -1.39
RNU6-27P-201ENST00000516146 ZBED2Q9BTP6 218 aa6.39□□□□□ -1.39
RNU6-27P-201ENST00000516146 RABGEF1Q9UJ41 708 aa6.39□□□□□ -1.39
RNU6-27P-201ENST00000516146 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
RNU6-27P-201ENST00000516146 SEMA3FQ13275 785 aa6.38□□□□□ -1.39
RNU6-27P-201ENST00000516146 HLA-CQ95604 372 aa6.38□□□□□ -1.39
RNU6-27P-201ENST00000516146 ALG2Q9H553 416 aa6.38□□□□□ -1.39
RNU6-27P-201ENST00000516146 CFAP99D6REC4 459 aa6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 GPR37L1O60883 481 aa6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 CFHP08603 1231 aa6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 ATP6V1AP38606 617 aa6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 FUT2Q10981 343 aa6.37□□□□□ -1.39
RNU6-27P-201ENST00000516146 EIF4G2P78344 907 aaKnown RBP eCLIP6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 FAM98CQ17RN3 349 aaKnown RBP6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 KMT5BQ4FZB7 885 aa6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
RNU6-27P-201ENST00000516146 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
RNU6-27P-201ENST00000516146 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
RNU6-27P-201ENST00000516146 SEPT9Q9UHD8 586 aaPredicted RBP6.35□□□□□ -1.39
RNU6-27P-201ENST00000516146 MTMR7Q9Y216 660 aa6.35□□□□□ -1.39
RNU6-27P-201ENST00000516146 RNF40O75150 1001 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 ATG7O95352 703 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 NR6A1Q15406 480 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 Q3C1V9 767 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 B4GALNT3Q6L9W6 998 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 LAPTM4BQ86VI4 370 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 RETREG3Q86VR2 466 aa6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 TFIP11Q9UBB9 837 aaKnown RBP6.34□□□□□ -1.39
RNU6-27P-201ENST00000516146 ARHGAP33O14559 1287 aa6.33□□□□□ -1.4
RNU6-27P-201ENST00000516146 DESI1Q6ICB0 168 aa6.33□□□□□ -1.4
RNU6-27P-201ENST00000516146 EPS8L1Q8TE68 723 aa6.33□□□□□ -1.4
RNU6-27P-201ENST00000516146 UCN2Q96RP3 112 aa6.33□□□□□ -1.4
RNU6-27P-201ENST00000516146 NBPF3Q9H094 633 aa6.33□□□□□ -1.4
RNU6-27P-201ENST00000516146 PSEN2P49810 448 aa6.32□□□□□ -1.4
RNU6-27P-201ENST00000516146 SAMD7Q7Z3H4 446 aa6.32□□□□□ -1.4
RNU6-27P-201ENST00000516146 PRR14Q9BWN1 585 aa6.32□□□□□ -1.4
RNU6-27P-201ENST00000516146 VRTNQ9H8Y1 702 aa6.32□□□□□ -1.4
RNU6-27P-201ENST00000516146 MAFBQ9Y5Q3 323 aaPredicted RBP6.32□□□□□ -1.4
RNU6-27P-201ENST00000516146 ATP9BO43861 1147 aa6.31□□□□□ -1.4
RNU6-27P-201ENST00000516146 NR1H3Q13133 447 aa6.31□□□□□ -1.4
RNU6-27P-201ENST00000516146 PER1O15534 1290 aaPredicted RBP6.3□□□□□ -1.4
RNU6-27P-201ENST00000516146 PBX2P40425 430 aa6.3□□□□□ -1.4
RNU6-27P-201ENST00000516146 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
RNU6-27P-201ENST00000516146 SYMPKQ92797 1274 aaKnown RBP6.3□□□□□ -1.4
RNU6-27P-201ENST00000516146 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
RNU6-27P-201ENST00000516146 POTEB2H3BUK9 544 aa6.29□□□□□ -1.4
RNU6-27P-201ENST00000516146 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
RNU6-27P-201ENST00000516146 CDCA8Q53HL2 280 aa6.29□□□□□ -1.4
RNU6-27P-201ENST00000516146 LYPD8Q6UX82 237 aa6.29□□□□□ -1.4
RNU6-27P-201ENST00000516146 TBC1D9Q6ZT07 1266 aa6.29□□□□□ -1.4
RNU6-27P-201ENST00000516146 ERBB3P21860 1342 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 ZC3H4Q9UPT8 1303 aaKnown RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 ZBBXA8MT70 800 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 ACTN4O43707 911 aaKnown RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 RBM25P49756 843 aaKnown RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 MORN1Q5T089 497 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 FOXD4L5Q5VV16 416 aaPredicted RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 SND1Q7KZF4 910 aaKnown RBP eCLIP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 FOXD4L4Q8WXT5 416 aaPredicted RBP6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 VPS9D1Q9Y2B5 631 aa6.28□□□□□ -1.4
RNU6-27P-201ENST00000516146 DMRTA1Q5VZB9 504 aa6.27□□□□□ -1.41
RNU6-27P-201ENST00000516146 LRCH3Q96II8 777 aa6.27□□□□□ -1.41
RNU6-27P-201ENST00000516146 SLC27A5Q9Y2P5 690 aa6.27□□□□□ -1.41
RNU6-27P-201ENST00000516146 CARNS1A5YM72 827 aa6.26□□□□□ -1.41
RNU6-27P-201ENST00000516146 VARS2Q5ST30 1063 aaKnown RBP6.26□□□□□ -1.41
RNU6-27P-201ENST00000516146 ZFRQ96KR1 1074 aaKnown RBP6.26□□□□□ -1.41
RNU6-27P-201ENST00000516146 USB1Q9BQ65 265 aaKnown RBP6.26□□□□□ -1.41
RNU6-27P-201ENST00000516146 FKBPLQ9UIM3 349 aa6.26□□□□□ -1.41
RNU6-27P-201ENST00000516146 FBXO45P0C2W1 286 aa6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 PUS10Q3MIT2 529 aaKnown RBP6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 CCER1Q8TC90 406 aaPredicted RBP6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 GNEQ9Y223 722 aaKnown RBP6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 AMOTL2Q9Y2J4 779 aa6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 SALL2Q9Y467 1007 aaPredicted RBP6.25□□□□□ -1.41
RNU6-27P-201ENST00000516146 USP17L3A6NCW0 530 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 USP17L4A6NCW7 530 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 E9PSI1 815 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 SKIP12755 728 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 MCCD1P59942 119 aaPredicted RBP6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 USP17L2Q6R6M4 530 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms