RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 PPLO60437 1756 aa16.26■□□□□ 0.19
UBE2D3-232ENST00000514755 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-232ENST00000514755 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
UBE2D3-232ENST00000514755 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
UBE2D3-232ENST00000514755 METP08581 1390 aa16.24■□□□□ 0.19
UBE2D3-232ENST00000514755 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-232ENST00000514755 RPGRIP1LQ68CZ1 1315 aa16.23■□□□□ 0.19
UBE2D3-232ENST00000514755 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-232ENST00000514755 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
UBE2D3-232ENST00000514755 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
UBE2D3-232ENST00000514755 NUBP1P53384 320 aa16.22■□□□□ 0.19
UBE2D3-232ENST00000514755 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-232ENST00000514755 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-232ENST00000514755 PIP4K2BP78356 416 aa16.21■□□□□ 0.19
UBE2D3-232ENST00000514755 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
UBE2D3-232ENST00000514755 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
UBE2D3-232ENST00000514755 TOM1O60784 492 aa16.2■□□□□ 0.18
UBE2D3-232ENST00000514755 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-232ENST00000514755 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-232ENST00000514755 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-232ENST00000514755 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
UBE2D3-232ENST00000514755 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
UBE2D3-232ENST00000514755 MSH6P52701 1360 aa16.13■□□□□ 0.17
UBE2D3-232ENST00000514755 NRXN1Q9ULB1 1477 aa16.12■□□□□ 0.17
UBE2D3-232ENST00000514755 HSPA1LP34931 641 aa16.12■□□□□ 0.17
UBE2D3-232ENST00000514755 MYOM2P54296 1465 aa16.11■□□□□ 0.17
UBE2D3-232ENST00000514755 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
UBE2D3-232ENST00000514755 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-232ENST00000514755 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-232ENST00000514755 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
UBE2D3-232ENST00000514755 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
UBE2D3-232ENST00000514755 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
UBE2D3-232ENST00000514755 CFAP70Q5T0N1 1121 aa16.09■□□□□ 0.17
UBE2D3-232ENST00000514755 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
UBE2D3-232ENST00000514755 KDM2AQ9Y2K7 1162 aa16.09■□□□□ 0.17
UBE2D3-232ENST00000514755 GSE1Q14687 1217 aa16.08■□□□□ 0.16
UBE2D3-232ENST00000514755 DCAF11Q8TEB1 546 aa16.08■□□□□ 0.16
UBE2D3-232ENST00000514755 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-232ENST00000514755 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
UBE2D3-232ENST00000514755 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
UBE2D3-232ENST00000514755 C19orf44Q9H6X5 657 aa16.07■□□□□ 0.16
UBE2D3-232ENST00000514755 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
UBE2D3-232ENST00000514755 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
UBE2D3-232ENST00000514755 NALCNQ8IZF0 1738 aa16.07■□□□□ 0.16
UBE2D3-232ENST00000514755 FAM135BQ49AJ0 1406 aa16.06■□□□□ 0.16
UBE2D3-232ENST00000514755 FAM212AQ96EL1 285 aa16.06■□□□□ 0.16
UBE2D3-232ENST00000514755 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
UBE2D3-232ENST00000514755 STK26Q9P289 416 aa16.06■□□□□ 0.16
UBE2D3-232ENST00000514755 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-232ENST00000514755 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
UBE2D3-232ENST00000514755 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-232ENST00000514755 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-232ENST00000514755 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
UBE2D3-232ENST00000514755 ATF3P18847 181 aa16.03■□□□□ 0.16
UBE2D3-232ENST00000514755 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
UBE2D3-232ENST00000514755 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
UBE2D3-232ENST00000514755 TECPR2O15040 1411 aa16.02■□□□□ 0.16
UBE2D3-232ENST00000514755 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
UBE2D3-232ENST00000514755 LAMC1P11047 1609 aa16.02■□□□□ 0.16
UBE2D3-232ENST00000514755 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
UBE2D3-232ENST00000514755 ADGRB1O14514 1584 aa16.01■□□□□ 0.15
UBE2D3-232ENST00000514755 DCCP43146 1447 aa16.01■□□□□ 0.15
UBE2D3-232ENST00000514755 MST1RQ04912 1400 aa16.01■□□□□ 0.15
UBE2D3-232ENST00000514755 NEUROD1Q13562 356 aa16■□□□□ 0.15
UBE2D3-232ENST00000514755 ECM2O94769 699 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-232ENST00000514755 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
UBE2D3-232ENST00000514755 BRINP3Q76B58 766 aa15.97■□□□□ 0.15
UBE2D3-232ENST00000514755 L3MBTL2Q969R5 705 aa15.97■□□□□ 0.15
UBE2D3-232ENST00000514755 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
UBE2D3-232ENST00000514755 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
UBE2D3-232ENST00000514755 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
UBE2D3-232ENST00000514755 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
UBE2D3-232ENST00000514755 C1orf167Q5SNV9 1468 aa15.95■□□□□ 0.14
UBE2D3-232ENST00000514755 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
UBE2D3-232ENST00000514755 SIRT1Q96EB6 747 aa15.94■□□□□ 0.14
UBE2D3-232ENST00000514755 PRAM1Q96QH2 718 aa15.94■□□□□ 0.14
UBE2D3-232ENST00000514755 CDC42BPGQ6DT37 1551 aa15.93■□□□□ 0.14
UBE2D3-232ENST00000514755 NBPF1Q3BBV0 1214 aa15.93■□□□□ 0.14
UBE2D3-232ENST00000514755 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
UBE2D3-232ENST00000514755 COL16A1Q07092 1604 aaPredicted RBP15.93■□□□□ 0.14
UBE2D3-232ENST00000514755 DLC1Q96QB1 1528 aa15.93■□□□□ 0.14
UBE2D3-232ENST00000514755 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
UBE2D3-232ENST00000514755 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
UBE2D3-232ENST00000514755 AHDC1Q5TGY3 1603 aaPredicted RBP15.92■□□□□ 0.14
UBE2D3-232ENST00000514755 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
UBE2D3-232ENST00000514755 DISP3Q9P2K9 1392 aa15.9■□□□□ 0.14
UBE2D3-232ENST00000514755 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
UBE2D3-232ENST00000514755 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
UBE2D3-232ENST00000514755 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
UBE2D3-232ENST00000514755 FMN2Q9NZ56 1722 aa15.88■□□□□ 0.13
UBE2D3-232ENST00000514755 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-232ENST00000514755 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-232ENST00000514755 POGKQ9P215 609 aa15.88■□□□□ 0.13
UBE2D3-232ENST00000514755 NBPF8Q3BBV2 869 aa15.87■□□□□ 0.13
UBE2D3-232ENST00000514755 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
UBE2D3-232ENST00000514755 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
UBE2D3-232ENST00000514755 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-232ENST00000514755 RGPD8O14715 1765 aaPredicted RBP15.85■□□□□ 0.13
UBE2D3-232ENST00000514755 RGL2O15211 777 aa15.85■□□□□ 0.13
UBE2D3-232ENST00000514755 TRPM1Q7Z4N2 1603 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms