RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.42
SERF1A-207ENST00000512649 PLEKHH1Q9ULM0 1364 aa23.94■■□□□ 1.42
SERF1A-207ENST00000512649 ESCO1Q5FWF5 840 aa23.94■■□□□ 1.42
SERF1A-207ENST00000512649 DDX17Q92841 729 aaKnown RBP23.94■■□□□ 1.42
SERF1A-207ENST00000512649 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
SERF1A-207ENST00000512649 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
SERF1A-207ENST00000512649 SAFB2Q14151 953 aaKnown RBP eCLIP23.93■■□□□ 1.42
SERF1A-207ENST00000512649 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
SERF1A-207ENST00000512649 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
SERF1A-207ENST00000512649 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
SERF1A-207ENST00000512649 TRAK1Q9UPV9 953 aa23.92■■□□□ 1.42
SERF1A-207ENST00000512649 KNDC1Q76NI1 1749 aa23.92■■□□□ 1.42
SERF1A-207ENST00000512649 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.41
SERF1A-207ENST00000512649 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.41
SERF1A-207ENST00000512649 SOCS7O14512 581 aa23.89■■□□□ 1.41
SERF1A-207ENST00000512649 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.41
SERF1A-207ENST00000512649 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
SERF1A-207ENST00000512649 NHSL1Q5SYE7 1610 aa23.86■■□□□ 1.41
SERF1A-207ENST00000512649 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
SERF1A-207ENST00000512649 RGS17Q9UGC6 210 aaPredicted RBP23.86■■□□□ 1.41
SERF1A-207ENST00000512649 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
SERF1A-207ENST00000512649 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
SERF1A-207ENST00000512649 FOXO3O43524 673 aa23.83■■□□□ 1.41
SERF1A-207ENST00000512649 SOS2Q07890 1332 aaPredicted RBP23.83■■□□□ 1.4
SERF1A-207ENST00000512649 SHPRHQ149N8 1683 aa23.83■■□□□ 1.4
SERF1A-207ENST00000512649 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
SERF1A-207ENST00000512649 DLC1Q96QB1 1528 aa23.82■■□□□ 1.4
SERF1A-207ENST00000512649 HIRIP3Q9BW71 556 aaPredicted RBP23.8■■□□□ 1.4
SERF1A-207ENST00000512649 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
SERF1A-207ENST00000512649 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
SERF1A-207ENST00000512649 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
SERF1A-207ENST00000512649 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
SERF1A-207ENST00000512649 POTEAQ6S8J7 498 aa23.77■■□□□ 1.4
SERF1A-207ENST00000512649 PHF8Q9UPP1 1060 aa23.77■■□□□ 1.4
SERF1A-207ENST00000512649 LRP6O75581 1613 aa23.77■■□□□ 1.4
SERF1A-207ENST00000512649 ZNF772Q68DY9 489 aaPredicted RBP23.76■■□□□ 1.39
SERF1A-207ENST00000512649 FMN2Q9NZ56 1722 aa23.76■■□□□ 1.39
SERF1A-207ENST00000512649 NBPF1Q3BBV0 1214 aa23.74■■□□□ 1.39
SERF1A-207ENST00000512649 PSME1Q06323 249 aa23.73■■□□□ 1.39
SERF1A-207ENST00000512649 KRT28Q7Z3Y7 464 aa23.73■■□□□ 1.39
SERF1A-207ENST00000512649 WASLO00401 505 aaPredicted RBP23.72■■□□□ 1.39
SERF1A-207ENST00000512649 ADAMTS2O95450 1211 aa23.72■■□□□ 1.39
SERF1A-207ENST00000512649 C8orf37Q96NL8 207 aa23.72■■□□□ 1.39
SERF1A-207ENST00000512649 EIF3AQ14152 1382 aaKnown RBP23.72■■□□□ 1.39
SERF1A-207ENST00000512649 PMFBP1Q8TBY8 1022 aa23.7■■□□□ 1.38
SERF1A-207ENST00000512649 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
SERF1A-207ENST00000512649 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
SERF1A-207ENST00000512649 PXDNQ92626 1479 aa23.68■■□□□ 1.38
SERF1A-207ENST00000512649 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
SERF1A-207ENST00000512649 AFF2P51816 1311 aa23.68■■□□□ 1.38
SERF1A-207ENST00000512649 KIF1AQ12756 1690 aa23.68■■□□□ 1.38
SERF1A-207ENST00000512649 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
SERF1A-207ENST00000512649 RGPD8O14715 1765 aaPredicted RBP23.66■■□□□ 1.38
SERF1A-207ENST00000512649 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
SERF1A-207ENST00000512649 SPATA31A3Q5VYP0 1347 aa23.64■■□□□ 1.38
SERF1A-207ENST00000512649 CDK19Q9BWU1 502 aa23.64■■□□□ 1.37
SERF1A-207ENST00000512649 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
SERF1A-207ENST00000512649 RXRBP28702 533 aa23.63■■□□□ 1.37
SERF1A-207ENST00000512649 NGDNQ8NEJ9 315 aaKnown RBP23.63■■□□□ 1.37
SERF1A-207ENST00000512649 HAP1P54257 671 aaPredicted RBP23.62■■□□□ 1.37
SERF1A-207ENST00000512649 NUDT16Q96DE0 195 aaKnown RBP23.62■■□□□ 1.37
SERF1A-207ENST00000512649 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
SERF1A-207ENST00000512649 CENPJQ9HC77 1338 aaPredicted RBP23.61■■□□□ 1.37
SERF1A-207ENST00000512649 TULP4Q9NRJ4 1543 aa23.61■■□□□ 1.37
SERF1A-207ENST00000512649 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
SERF1A-207ENST00000512649 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
SERF1A-207ENST00000512649 PLEKHG5O94827 1062 aa23.6■■□□□ 1.37
SERF1A-207ENST00000512649 QTRT2Q9H974 415 aaKnown RBP23.6■■□□□ 1.37
SERF1A-207ENST00000512649 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
SERF1A-207ENST00000512649 COL22A1Q8NFW1 1626 aaPredicted RBP23.59■■□□□ 1.37
SERF1A-207ENST00000512649 SBNO1A3KN83 1393 aa23.58■■□□□ 1.37
SERF1A-207ENST00000512649 USP32Q8NFA0 1604 aa23.58■■□□□ 1.36
SERF1A-207ENST00000512649 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
SERF1A-207ENST00000512649 USP21Q9UK80 565 aa23.57■■□□□ 1.36
SERF1A-207ENST00000512649 TNS3Q68CZ2 1445 aa23.57■■□□□ 1.36
SERF1A-207ENST00000512649 PAK3O75914 559 aaPredicted RBP23.56■■□□□ 1.36
SERF1A-207ENST00000512649 ARHGEF10O15013 1369 aa23.55■■□□□ 1.36
SERF1A-207ENST00000512649 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
SERF1A-207ENST00000512649 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
SERF1A-207ENST00000512649 RBM6P78332 1123 aaKnown RBP23.53■■□□□ 1.36
SERF1A-207ENST00000512649 FNBP4Q8N3X1 1017 aaPredicted RBP23.53■■□□□ 1.36
SERF1A-207ENST00000512649 CABLES1Q8TDN4 633 aa23.53■■□□□ 1.36
SERF1A-207ENST00000512649 TRPC5Q9UL62 973 aaPredicted RBP23.52■■□□□ 1.36
SERF1A-207ENST00000512649 TRPM1Q7Z4N2 1603 aa23.51■■□□□ 1.35
SERF1A-207ENST00000512649 CABP2Q9NPB3 220 aa23.51■■□□□ 1.35
SERF1A-207ENST00000512649 ATP7BP35670 1465 aa23.5■■□□□ 1.35
SERF1A-207ENST00000512649 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
SERF1A-207ENST00000512649 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
SERF1A-207ENST00000512649 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
SERF1A-207ENST00000512649 ITSN1Q15811 1721 aa23.48■■□□□ 1.35
SERF1A-207ENST00000512649 PLEKHG3A1L390 1219 aa23.48■■□□□ 1.35
SERF1A-207ENST00000512649 ACEP12821 1306 aa23.48■■□□□ 1.35
SERF1A-207ENST00000512649 QRICH2Q9H0J4 1663 aa23.45■■□□□ 1.34
SERF1A-207ENST00000512649 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
SERF1A-207ENST00000512649 PPIP5K1Q6PFW1 1433 aa23.43■■□□□ 1.34
SERF1A-207ENST00000512649 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
SERF1A-207ENST00000512649 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
SERF1A-207ENST00000512649 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
SERF1A-207ENST00000512649 CDK12Q9NYV4 1490 aaPredicted RBP23.42■■□□□ 1.34
SERF1A-207ENST00000512649 TRPM3Q9HCF6 1732 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms