RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
CLDND1-221ENST00000510541 HSPA1LP34931 641 aa24.81■■□□□ 1.56
CLDND1-221ENST00000510541 TRPM1Q7Z4N2 1603 aa24.8■■□□□ 1.56
CLDND1-221ENST00000510541 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
CLDND1-221ENST00000510541 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
CLDND1-221ENST00000510541 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
CLDND1-221ENST00000510541 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
CLDND1-221ENST00000510541 PRAM1Q96QH2 718 aa24.78■■□□□ 1.56
CLDND1-221ENST00000510541 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
CLDND1-221ENST00000510541 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
CLDND1-221ENST00000510541 NBPF1Q3BBV0 1214 aa24.75■■□□□ 1.55
CLDND1-221ENST00000510541 TRAK1Q9UPV9 953 aa24.75■■□□□ 1.55
CLDND1-221ENST00000510541 EIF3AQ14152 1382 aaKnown RBP24.75■■□□□ 1.55
CLDND1-221ENST00000510541 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
CLDND1-221ENST00000510541 POGKQ9P215 609 aa24.74■■□□□ 1.55
CLDND1-221ENST00000510541 ANKARQ7Z5J8 1434 aa24.74■■□□□ 1.55
CLDND1-221ENST00000510541 NHSL1Q5SYE7 1610 aa24.73■■□□□ 1.55
CLDND1-221ENST00000510541 RALGAPBQ86X10 1494 aa24.71■■□□□ 1.55
CLDND1-221ENST00000510541 COL16A1Q07092 1604 aaPredicted RBP24.7■■□□□ 1.54
CLDND1-221ENST00000510541 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
CLDND1-221ENST00000510541 PHLPP1O60346 1717 aa24.69■■□□□ 1.54
CLDND1-221ENST00000510541 ROCK2O75116 1388 aaKnown RBP24.68■■□□□ 1.54
CLDND1-221ENST00000510541 SBNO2Q9Y2G9 1366 aa24.66■■□□□ 1.54
CLDND1-221ENST00000510541 SOS2Q07890 1332 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-221ENST00000510541 WASLO00401 505 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-221ENST00000510541 KIF1AQ12756 1690 aa24.65■■□□□ 1.54
CLDND1-221ENST00000510541 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
CLDND1-221ENST00000510541 JCADQ9P266 1359 aa24.65■■□□□ 1.54
CLDND1-221ENST00000510541 CENPJQ9HC77 1338 aaPredicted RBP24.64■■□□□ 1.54
CLDND1-221ENST00000510541 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
CLDND1-221ENST00000510541 LRRC59Q96AG4 307 aaKnown RBP24.62■■□□□ 1.53
CLDND1-221ENST00000510541 ORAI2Q96SN7 254 aa24.61■■□□□ 1.53
CLDND1-221ENST00000510541 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
CLDND1-221ENST00000510541 SPATA31A6Q5VVP1 1343 aa24.6■■□□□ 1.53
CLDND1-221ENST00000510541 SLC24A1O60721 1099 aa24.59■■□□□ 1.53
CLDND1-221ENST00000510541 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-221ENST00000510541 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
CLDND1-221ENST00000510541 ESCO1Q5FWF5 840 aa24.58■■□□□ 1.53
CLDND1-221ENST00000510541 MINK1Q8N4C8 1332 aaPredicted RBP24.58■■□□□ 1.52
CLDND1-221ENST00000510541 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
CLDND1-221ENST00000510541 PXDNQ92626 1479 aa24.56■■□□□ 1.52
CLDND1-221ENST00000510541 CARD11Q9BXL7 1154 aa24.55■■□□□ 1.52
CLDND1-221ENST00000510541 PHF8Q9UPP1 1060 aa24.55■■□□□ 1.52
CLDND1-221ENST00000510541 ATP7BP35670 1465 aa24.55■■□□□ 1.52
CLDND1-221ENST00000510541 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
CLDND1-221ENST00000510541 ITSN1Q15811 1721 aa24.54■■□□□ 1.52
CLDND1-221ENST00000510541 PUS7Q96PZ0 661 aaKnown RBP24.53■■□□□ 1.52
CLDND1-221ENST00000510541 RGPD8O14715 1765 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-221ENST00000510541 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
CLDND1-221ENST00000510541 PRR36Q9H6K5 1346 aa24.52■■□□□ 1.52
CLDND1-221ENST00000510541 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-221ENST00000510541 HIRIP3Q9BW71 556 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-221ENST00000510541 CDK19Q9BWU1 502 aa24.51■■□□□ 1.51
CLDND1-221ENST00000510541 SBNO1A3KN83 1393 aa24.51■■□□□ 1.51
CLDND1-221ENST00000510541 PLEKHG3A1L390 1219 aa24.5■■□□□ 1.51
CLDND1-221ENST00000510541 EVC2Q86UK5 1308 aa24.5■■□□□ 1.51
CLDND1-221ENST00000510541 COL22A1Q8NFW1 1626 aaPredicted RBP24.5■■□□□ 1.51
CLDND1-221ENST00000510541 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
CLDND1-221ENST00000510541 FOXO3O43524 673 aa24.49■■□□□ 1.51
CLDND1-221ENST00000510541 NUDT16Q96DE0 195 aaKnown RBP24.49■■□□□ 1.51
CLDND1-221ENST00000510541 POLR3AO14802 1390 aaPredicted RBP24.49■■□□□ 1.51
CLDND1-221ENST00000510541 PNPLA6Q8IY17 1366 aa24.49■■□□□ 1.51
CLDND1-221ENST00000510541 PSME1Q06323 249 aa24.48■■□□□ 1.51
CLDND1-221ENST00000510541 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
CLDND1-221ENST00000510541 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
CLDND1-221ENST00000510541 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
CLDND1-221ENST00000510541 DDX17Q92841 729 aaKnown RBP24.44■■□□□ 1.5
CLDND1-221ENST00000510541 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
CLDND1-221ENST00000510541 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
CLDND1-221ENST00000510541 TNS3Q68CZ2 1445 aa24.41■■□□□ 1.5
CLDND1-221ENST00000510541 ARHGEF10O15013 1369 aa24.41■■□□□ 1.5
CLDND1-221ENST00000510541 TESK2Q96S53 571 aa24.4■■□□□ 1.5
CLDND1-221ENST00000510541 TRPM3Q9HCF6 1732 aaPredicted RBP24.4■■□□□ 1.5
CLDND1-221ENST00000510541 SRPK2P78362 688 aaKnown RBP24.38■■□□□ 1.49
CLDND1-221ENST00000510541 USP47Q96K76 1375 aa24.37■■□□□ 1.49
CLDND1-221ENST00000510541 LRP6O75581 1613 aa24.36■■□□□ 1.49
CLDND1-221ENST00000510541 NGDNQ8NEJ9 315 aaKnown RBP24.36■■□□□ 1.49
CLDND1-221ENST00000510541 PMFBP1Q8TBY8 1022 aa24.36■■□□□ 1.49
CLDND1-221ENST00000510541 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
CLDND1-221ENST00000510541 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
CLDND1-221ENST00000510541 ALS2Q96Q42 1657 aa24.35■■□□□ 1.49
CLDND1-221ENST00000510541 NINLQ9Y2I6 1382 aa24.35■■□□□ 1.49
CLDND1-221ENST00000510541 ST20-MTHFSA0A0A6YYL1 179 aa24.35■■□□□ 1.49
CLDND1-221ENST00000510541 ZNF692Q9BU19 519 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-221ENST00000510541 CABP2Q9NPB3 220 aa24.34■■□□□ 1.49
CLDND1-221ENST00000510541 ACEP12821 1306 aa24.34■■□□□ 1.49
CLDND1-221ENST00000510541 CPSF1Q10570 1443 aaKnown RBP24.31■■□□□ 1.48
CLDND1-221ENST00000510541 SSH2Q76I76 1423 aa24.3■■□□□ 1.48
CLDND1-221ENST00000510541 XPCQ01831 940 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-221ENST00000510541 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
CLDND1-221ENST00000510541 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
CLDND1-221ENST00000510541 USP6P35125 1406 aa24.27■■□□□ 1.48
CLDND1-221ENST00000510541 TMF1P82094 1093 aa24.26■■□□□ 1.47
CLDND1-221ENST00000510541 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-221ENST00000510541 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-221ENST00000510541 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
CLDND1-221ENST00000510541 ZNF772Q68DY9 489 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-221ENST00000510541 AKAP12Q02952 1782 aa24.24■■□□□ 1.47
CLDND1-221ENST00000510541 FNBP4Q8N3X1 1017 aaPredicted RBP24.24■■□□□ 1.47
CLDND1-221ENST00000510541 CRYBG1Q9Y4K1 1723 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms