RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SYMPKQ92797 1274 aaKnown RBP15.61■□□□□ 0.09
CHD1-205ENST00000508756 Q3C1V9 767 aa15.6■□□□□ 0.09
CHD1-205ENST00000508756 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
CHD1-205ENST00000508756 BRICD5Q6PL45 260 aa15.59■□□□□ 0.09
CHD1-205ENST00000508756 GOPCQ9HD26 462 aa15.59■□□□□ 0.09
CHD1-205ENST00000508756 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
CHD1-205ENST00000508756 FMNL1O95466 1100 aaPredicted RBP15.58■□□□□ 0.08
CHD1-205ENST00000508756 C6orf229H3BNL8 230 aa15.57■□□□□ 0.08
CHD1-205ENST00000508756 QPCTQ16769 361 aa15.57■□□□□ 0.08
CHD1-205ENST00000508756 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
CHD1-205ENST00000508756 SPSB2Q99619 263 aa15.57■□□□□ 0.08
CHD1-205ENST00000508756 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
CHD1-205ENST00000508756 ADH1BP00325 375 aa15.56■□□□□ 0.08
CHD1-205ENST00000508756 TUSC1Q2TAM9 212 aa15.56■□□□□ 0.08
CHD1-205ENST00000508756 PCMTD1Q96MG8 357 aaPredicted RBP15.56■□□□□ 0.08
CHD1-205ENST00000508756 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHD1-205ENST00000508756 HRCP23327 699 aa15.53■□□□□ 0.08
CHD1-205ENST00000508756 MTMR2Q13614 643 aa15.53■□□□□ 0.08
CHD1-205ENST00000508756 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
CHD1-205ENST00000508756 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
CHD1-205ENST00000508756 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
CHD1-205ENST00000508756 FAM160A2Q8N612 972 aaPredicted RBP15.52■□□□□ 0.08
CHD1-205ENST00000508756 USB1Q9BQ65 265 aaKnown RBP15.52■□□□□ 0.08
CHD1-205ENST00000508756 LILRB3O75022 631 aa15.51■□□□□ 0.07
CHD1-205ENST00000508756 PRPF38BQ5VTL8 546 aaKnown RBP15.51■□□□□ 0.07
CHD1-205ENST00000508756 RETREG3Q86VR2 466 aa15.51■□□□□ 0.07
CHD1-205ENST00000508756 PRDM9Q9NQV7 894 aa15.5■□□□□ 0.07
CHD1-205ENST00000508756 NUTM2BA6NNL0 878 aaPredicted RBP15.49■□□□□ 0.07
CHD1-205ENST00000508756 NUTM2EB1AL46 878 aaPredicted RBP15.49■□□□□ 0.07
CHD1-205ENST00000508756 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
CHD1-205ENST00000508756 IFFO2Q5TF58 517 aa15.49■□□□□ 0.07
CHD1-205ENST00000508756 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
CHD1-205ENST00000508756 NUTM2AQ8IVF1 878 aaPredicted RBP15.49■□□□□ 0.07
CHD1-205ENST00000508756 S1PR4O95977 384 aa15.47■□□□□ 0.07
CHD1-205ENST00000508756 PRR7Q8TB68 274 aa15.47■□□□□ 0.07
CHD1-205ENST00000508756 SLC6A16Q9GZN6 736 aa15.47■□□□□ 0.07
CHD1-205ENST00000508756 SPDYE5A6NIY4 337 aa15.46■□□□□ 0.07
CHD1-205ENST00000508756 CFAP99D6REC4 459 aa15.46■□□□□ 0.07
CHD1-205ENST00000508756 MSS51Q4VC12 460 aa15.46■□□□□ 0.07
CHD1-205ENST00000508756 PPP2R2DQ66LE6 453 aa15.42■□□□□ 0.06
CHD1-205ENST00000508756 PPP1R18Q6NYC8 613 aa15.41■□□□□ 0.06
CHD1-205ENST00000508756 TSC1Q92574 1164 aa15.4■□□□□ 0.06
CHD1-205ENST00000508756 A0A0G2JS52 829 aa15.39■□□□□ 0.05
CHD1-205ENST00000508756 JUNDP17535 347 aa15.39■□□□□ 0.05
CHD1-205ENST00000508756 RFC5P40937 340 aa15.39■□□□□ 0.05
CHD1-205ENST00000508756 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
CHD1-205ENST00000508756 DXOO77932 396 aaKnown RBP15.38■□□□□ 0.05
CHD1-205ENST00000508756 MMP16P51512 607 aa15.38■□□□□ 0.05
CHD1-205ENST00000508756 RNF223E7ERA6 249 aa15.37■□□□□ 0.05
CHD1-205ENST00000508756 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.37■□□□□ 0.05
CHD1-205ENST00000508756 GGCXP38435 758 aa15.36■□□□□ 0.05
CHD1-205ENST00000508756 DESI1Q6ICB0 168 aa15.33■□□□□ 0.04
CHD1-205ENST00000508756 FCF1Q9Y324 198 aaKnown RBP15.33■□□□□ 0.04
CHD1-205ENST00000508756 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
CHD1-205ENST00000508756 AP1G2O75843 785 aa15.32■□□□□ 0.04
CHD1-205ENST00000508756 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
CHD1-205ENST00000508756 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
CHD1-205ENST00000508756 LYPD8Q6UX82 237 aa15.29■□□□□ 0.04
CHD1-205ENST00000508756 PTPRNQ16849 979 aa15.28■□□□□ 0.04
CHD1-205ENST00000508756 ANKLE1Q8NAG6 615 aa15.28■□□□□ 0.04
CHD1-205ENST00000508756 PLA2G2CQ5R387 149 aa15.27■□□□□ 0.04
CHD1-205ENST00000508756 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
CHD1-205ENST00000508756 TMEM259Q4ZIN3 620 aa15.26■□□□□ 0.03
CHD1-205ENST00000508756 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
CHD1-205ENST00000508756 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
CHD1-205ENST00000508756 CCNYL3P0C7X3 344 aa15.25■□□□□ 0.03
CHD1-205ENST00000508756 LRRN4Q8WUT4 740 aa15.25■□□□□ 0.03
CHD1-205ENST00000508756 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
CHD1-205ENST00000508756 EMID1Q96A84 441 aaPredicted RBP15.2■□□□□ 0.02
CHD1-205ENST00000508756 F12P00748 615 aaPredicted RBP15.19■□□□□ 0.02
CHD1-205ENST00000508756 PTCRAQ6ISU1 281 aaPredicted RBP15.19■□□□□ 0.02
CHD1-205ENST00000508756 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
CHD1-205ENST00000508756 EVA1BQ9NVM1 165 aa15.19■□□□□ 0.02
CHD1-205ENST00000508756 CTHP32929 405 aa15.18■□□□□ 0.02
CHD1-205ENST00000508756 KCNH2Q12809 1159 aa15.17■□□□□ 0.02
CHD1-205ENST00000508756 BANK1Q8NDB2 785 aa15.17■□□□□ 0.02
CHD1-205ENST00000508756 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
CHD1-205ENST00000508756 LIAT1Q6ZQX7 453 aa15.16■□□□□ 0.02
CHD1-205ENST00000508756 PRKD2Q9BZL6 878 aa15.14■□□□□ 0.01
CHD1-205ENST00000508756 MTMR14Q8NCE2 650 aa15.13■□□□□ 0.01
CHD1-205ENST00000508756 EPS8L1Q8TE68 723 aa15.13■□□□□ 0.01
CHD1-205ENST00000508756 SLC19A1P41440 591 aa15.12■□□□□ 0.01
CHD1-205ENST00000508756 NR6A1Q15406 480 aa15.12■□□□□ 0.01
CHD1-205ENST00000508756 UNC93B1Q9H1C4 597 aa15.12■□□□□ 0.01
CHD1-205ENST00000508756 ZBTB24O43167 697 aaPredicted RBP15.11■□□□□ 0.01
CHD1-205ENST00000508756 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
CHD1-205ENST00000508756 RPIAP49247 311 aa15.09■□□□□ 0.01
CHD1-205ENST00000508756 MCM6Q14566 821 aa15.09■□□□□ 0.01
CHD1-205ENST00000508756 TRIM32Q13049 653 aa15.08■□□□□ 0
CHD1-205ENST00000508756 GJD4Q96KN9 370 aaPredicted RBP15.08■□□□□ 0
CHD1-205ENST00000508756 V9GY48 417 aaPredicted RBP15.06■□□□□ 0
CHD1-205ENST00000508756 LINC01559Q495D7 138 aa15.05■□□□□ -0
CHD1-205ENST00000508756 SPRYD7Q5W111 196 aa15.05■□□□□ -0
CHD1-205ENST00000508756 BAP1Q92560 729 aa15.04■□□□□ -0
CHD1-205ENST00000508756 RGS20O76081 388 aa15.03■□□□□ -0
CHD1-205ENST00000508756 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
CHD1-205ENST00000508756 SOCS7O14512 581 aa15.02■□□□□ -0
CHD1-205ENST00000508756 CD2BP2O95400 341 aaKnown RBP15.02■□□□□ -0
CHD1-205ENST00000508756 FLIIQ13045 1269 aa15.01□□□□□ -0.01
CHD1-205ENST00000508756 SKOR1P84550 965 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms