RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 TPM3P06753 285 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 GTF2F1P35269 517 aaKnown RBP eCLIP7.58□□□□□ -1.2
PDE4D-216ENST00000507116 ZNF710Q8N1W2 664 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 SDR16C5Q8N3Y7 309 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 PRIMPOLQ96LW4 560 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 PRDM2Q13029 1718 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 C1QTNF12Q5T7M4 302 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
PDE4D-216ENST00000507116 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 IGF1RP08069 1367 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 H0YHG0 523 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 SARNPP82979 210 aaKnown RBP7.57□□□□□ -1.2
PDE4D-216ENST00000507116 PAXBP1Q9Y5B6 917 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 UNC13AQ9UPW8 1703 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6L6A8MZA4 724 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 UVSSAQ2YD98 709 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 GZF1Q9H116 711 aaPredicted RBP7.57□□□□□ -1.2
PDE4D-216ENST00000507116 KDM4CQ9H3R0 1056 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
PDE4D-216ENST00000507116 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
PDE4D-216ENST00000507116 NEFHP12036 1026 aa7.56□□□□□ -1.2
PDE4D-216ENST00000507116 PAX7P23759 505 aa7.56□□□□□ -1.2
PDE4D-216ENST00000507116 CCT2P78371 535 aaKnown RBP7.56□□□□□ -1.2
PDE4D-216ENST00000507116 HNRNPUL2Q1KMD3 747 aaKnown RBP7.56□□□□□ -1.2
PDE4D-216ENST00000507116 KCTD17Q8N5Z5 321 aa7.56□□□□□ -1.2
PDE4D-216ENST00000507116 TNPO1Q92973 898 aaKnown RBP7.56□□□□□ -1.2
PDE4D-216ENST00000507116 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
PDE4D-216ENST00000507116 DHX57Q6P158 1386 aaKnown RBP7.55□□□□□ -1.2
PDE4D-216ENST00000507116 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
PDE4D-216ENST00000507116 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
PDE4D-216ENST00000507116 CC2D2AQ9P2K1 1620 aa7.55□□□□□ -1.2
PDE4D-216ENST00000507116 XPCQ01831 940 aaPredicted RBP7.55□□□□□ -1.2
PDE4D-216ENST00000507116 TERF2Q15554 542 aa7.55□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6L1Q8N7Z2 621 aa7.55□□□□□ -1.2
PDE4D-216ENST00000507116 ERCC4Q92889 916 aaPredicted RBP7.55□□□□□ -1.2
PDE4D-216ENST00000507116 CCDC196A0A1B0GTZ2 297 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6L22H0YM25 854 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 TRAK2O60296 914 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 CASQ1P31415 396 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 RPAINQ86UA6 219 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 SMG6Q86US8 1419 aaKnown RBP7.54□□□□□ -1.2
PDE4D-216ENST00000507116 MCM4P33991 863 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 PPP2R5AQ15172 486 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 DEF6Q9H4E7 631 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
PDE4D-216ENST00000507116 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
PDE4D-216ENST00000507116 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
PDE4D-216ENST00000507116 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
PDE4D-216ENST00000507116 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 GSCP56915 257 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-216ENST00000507116 TMX1Q9H3N1 280 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 EIF4G1Q04637 1599 aaKnown RBP7.53□□□□□ -1.2
PDE4D-216ENST00000507116 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
PDE4D-216ENST00000507116 TBC1D22AQ8WUA7 517 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 JRKLQ9Y4A0 524 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 PANK3Q9H999 370 aa7.53□□□□□ -1.2
PDE4D-216ENST00000507116 SSFA2P28290 1259 aa7.52□□□□□ -1.21
PDE4D-216ENST00000507116 SF3A1Q15459 793 aaKnown RBP7.52□□□□□ -1.21
PDE4D-216ENST00000507116 NME8Q8N427 588 aa7.52□□□□□ -1.21
PDE4D-216ENST00000507116 RBM5P52756 815 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDE4D-216ENST00000507116 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
PDE4D-216ENST00000507116 TRERF1Q96PN7 1200 aa7.52□□□□□ -1.21
PDE4D-216ENST00000507116 ZKSCAN5Q9Y2L8 839 aa7.52□□□□□ -1.21
PDE4D-216ENST00000507116 U2AF2P26368 475 aaKnown RBP eCLIP7.51□□□□□ -1.211e-6■■■□□ 16.3
PDE4D-216ENST00000507116 MAP9Q49MG5 647 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 FAM212AQ96EL1 285 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 ANKRD33BA6NCL7 494 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 ATP2B1P20020 1258 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 ABCD1P33897 745 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 CD151P48509 253 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 NASPP49321 788 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-216ENST00000507116 ZSCAN26Q16670 478 aa7.51□□□□□ -1.21
PDE4D-216ENST00000507116 ERICH4A6NGS2 130 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 BRD1O95696 1058 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
PDE4D-216ENST00000507116 CHAF1AQ13111 956 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-216ENST00000507116 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 KLHL23Q8NBE8 558 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 ACRBPQ8NEB7 543 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 DRC1Q96MC2 740 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 ZNF280DQ6N043 979 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 MTA3Q9BTC8 594 aa7.5□□□□□ -1.21
PDE4D-216ENST00000507116 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-216ENST00000507116 AKNAQ7Z591 1439 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 CCP110O43303 1012 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 SETSIPP0DME0 302 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 FAM161AQ3B820 660 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 RAD54L2Q9Y4B4 1467 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 HNRNPH2P55795 449 aaKnown RBP7.49□□□□□ -1.21
PDE4D-216ENST00000507116 GET4Q7L5D6 327 aaPredicted RBP7.49□□□□□ -1.21
PDE4D-216ENST00000507116 MORC1Q86VD1 984 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
PDE4D-216ENST00000507116 A0A1B0GUL7 405 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms