RNA–Protein interactions for RNA: ENST00000506237.5

SUB1-206, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SUB1, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-206ENST00000506237 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
SUB1-206ENST00000506237 GGCXP38435 758 aa8.5□□□□□ -1.05
SUB1-206ENST00000506237 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
SUB1-206ENST00000506237 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
SUB1-206ENST00000506237 Q3C1V9 767 aa8.49□□□□□ -1.05
SUB1-206ENST00000506237 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
SUB1-206ENST00000506237 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
SUB1-206ENST00000506237 FAM117AQ9C073 453 aa8.49□□□□□ -1.05
SUB1-206ENST00000506237 MSS51Q4VC12 460 aa8.47□□□□□ -1.05
SUB1-206ENST00000506237 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
SUB1-206ENST00000506237 RSBN1LQ6PCB5 846 aaPredicted RBP8.47□□□□□ -1.05
SUB1-206ENST00000506237 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
SUB1-206ENST00000506237 RIC3Q7Z5B4 369 aa8.46□□□□□ -1.06
SUB1-206ENST00000506237 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
SUB1-206ENST00000506237 PLEKHG3A1L390 1219 aa8.45□□□□□ -1.06
SUB1-206ENST00000506237 C6orf229H3BNL8 230 aa8.45□□□□□ -1.06
SUB1-206ENST00000506237 SPTLC1O15269 473 aa8.45□□□□□ -1.06
SUB1-206ENST00000506237 SLC19A1P41440 591 aa8.45□□□□□ -1.06
SUB1-206ENST00000506237 MMP16P51512 607 aa8.44□□□□□ -1.06
SUB1-206ENST00000506237 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
SUB1-206ENST00000506237 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
SUB1-206ENST00000506237 DXOO77932 396 aaKnown RBP8.43□□□□□ -1.06
SUB1-206ENST00000506237 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
SUB1-206ENST00000506237 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
SUB1-206ENST00000506237 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
SUB1-206ENST00000506237 HRCP23327 699 aa8.42□□□□□ -1.06
SUB1-206ENST00000506237 DIXDC1Q155Q3 683 aa8.42□□□□□ -1.06
SUB1-206ENST00000506237 QPCTQ16769 361 aa8.42□□□□□ -1.06
SUB1-206ENST00000506237 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
SUB1-206ENST00000506237 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
SUB1-206ENST00000506237 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
SUB1-206ENST00000506237 GJA5P36382 358 aa8.41□□□□□ -1.06
SUB1-206ENST00000506237 MTMR2Q13614 643 aa8.41□□□□□ -1.06
SUB1-206ENST00000506237 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
SUB1-206ENST00000506237 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
SUB1-206ENST00000506237 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
SUB1-206ENST00000506237 JUNDP17535 347 aa8.4□□□□□ -1.06
SUB1-206ENST00000506237 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
SUB1-206ENST00000506237 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
SUB1-206ENST00000506237 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
SUB1-206ENST00000506237 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
SUB1-206ENST00000506237 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
SUB1-206ENST00000506237 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
SUB1-206ENST00000506237 LILRB3O75022 631 aa8.38□□□□□ -1.07
SUB1-206ENST00000506237 IL27Q8NEV9 243 aa8.38□□□□□ -1.07
SUB1-206ENST00000506237 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
SUB1-206ENST00000506237 Q6ZNB5 142 aa8.37□□□□□ -1.07
SUB1-206ENST00000506237 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
SUB1-206ENST00000506237 GFRA3O60609 400 aa8.36□□□□□ -1.07
SUB1-206ENST00000506237 SKIV2LQ15477 1246 aaKnown RBP8.36□□□□□ -1.07
SUB1-206ENST00000506237 ZNF697Q5TEC3 545 aa8.36□□□□□ -1.07
SUB1-206ENST00000506237 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
SUB1-206ENST00000506237 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
SUB1-206ENST00000506237 RPIAP49247 311 aa8.35□□□□□ -1.07
SUB1-206ENST00000506237 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
SUB1-206ENST00000506237 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
SUB1-206ENST00000506237 SPDYE5A6NIY4 337 aa8.34□□□□□ -1.07
SUB1-206ENST00000506237 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
SUB1-206ENST00000506237 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
SUB1-206ENST00000506237 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
SUB1-206ENST00000506237 GDF9O60383 454 aa8.34□□□□□ -1.07
SUB1-206ENST00000506237 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
SUB1-206ENST00000506237 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
SUB1-206ENST00000506237 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
SUB1-206ENST00000506237 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
SUB1-206ENST00000506237 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
SUB1-206ENST00000506237 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
SUB1-206ENST00000506237 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
SUB1-206ENST00000506237 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
SUB1-206ENST00000506237 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
SUB1-206ENST00000506237 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
SUB1-206ENST00000506237 FOXC1Q12948 553 aa8.32□□□□□ -1.08
SUB1-206ENST00000506237 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
SUB1-206ENST00000506237 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
SUB1-206ENST00000506237 EVA1BQ9NVM1 165 aa8.32□□□□□ -1.08
SUB1-206ENST00000506237 LCE2BO14633 110 aa8.31□□□□□ -1.08
SUB1-206ENST00000506237 SKOR1P84550 965 aa8.31□□□□□ -1.08
SUB1-206ENST00000506237 TRIM32Q13049 653 aa8.31□□□□□ -1.08
SUB1-206ENST00000506237 PTPRNQ16849 979 aa8.31□□□□□ -1.08
SUB1-206ENST00000506237 TSC1Q92574 1164 aa8.31□□□□□ -1.08
SUB1-206ENST00000506237 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
SUB1-206ENST00000506237 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
SUB1-206ENST00000506237 KCNH2Q12809 1159 aa8.29□□□□□ -1.08
SUB1-206ENST00000506237 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
SUB1-206ENST00000506237 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
SUB1-206ENST00000506237 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
SUB1-206ENST00000506237 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
SUB1-206ENST00000506237 PRR20EP86478 221 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 PRR20CP86479 221 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 PRR20DP86480 221 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 PRR20BP86481 221 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 PRR20AP86496 221 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 BAP1Q92560 729 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
SUB1-206ENST00000506237 CTHP32929 405 aa8.26□□□□□ -1.09
SUB1-206ENST00000506237 LAPTM4AQ15012 233 aa8.26□□□□□ -1.09
SUB1-206ENST00000506237 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
SUB1-206ENST00000506237 MRGPRX2Q96LB1 330 aa8.25□□□□□ -1.09
SUB1-206ENST00000506237 SH3BP2P78314 561 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms