RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 NBPF1Q3BBV0 1214 aa28.48■■■□□ 2.15
SMIM20-201ENST00000506197 ADGRL3Q9HAR2 1447 aa28.46■■■□□ 2.15
SMIM20-201ENST00000506197 TMEM132EQ6IEE7 984 aa28.46■■■□□ 2.15
SMIM20-201ENST00000506197 PTCH1Q13635 1447 aa28.45■■■□□ 2.15
SMIM20-201ENST00000506197 CARD11Q9BXL7 1154 aa28.45■■■□□ 2.14
SMIM20-201ENST00000506197 GPRASP1Q5JY77 1395 aa28.45■■■□□ 2.14
SMIM20-201ENST00000506197 JCADQ9P266 1359 aa28.44■■■□□ 2.14
SMIM20-201ENST00000506197 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
SMIM20-201ENST00000506197 YTHDC2Q9H6S0 1430 aaKnown RBP28.43■■■□□ 2.14
SMIM20-201ENST00000506197 MST1RQ04912 1400 aa28.42■■■□□ 2.14
SMIM20-201ENST00000506197 LRPPRCP42704 1394 aaKnown RBP28.39■■■□□ 2.14
SMIM20-201ENST00000506197 BRINP3Q76B58 766 aa28.39■■■□□ 2.14
SMIM20-201ENST00000506197 STK26Q9P289 416 aa28.39■■■□□ 2.14
SMIM20-201ENST00000506197 SHPRHQ149N8 1683 aa28.38■■■□□ 2.13
SMIM20-201ENST00000506197 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
SMIM20-201ENST00000506197 ROBO2Q9HCK4 1378 aa28.37■■■□□ 2.13
SMIM20-201ENST00000506197 NHSL1Q5SYE7 1610 aa28.37■■■□□ 2.13
SMIM20-201ENST00000506197 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
SMIM20-201ENST00000506197 TRAK1Q9UPV9 953 aa28.35■■■□□ 2.13
SMIM20-201ENST00000506197 EIF3AQ14152 1382 aaKnown RBP28.35■■■□□ 2.13
SMIM20-201ENST00000506197 ABCC11Q96J66 1382 aa28.35■■■□□ 2.13
SMIM20-201ENST00000506197 DLC1Q96QB1 1528 aa28.33■■■□□ 2.13
SMIM20-201ENST00000506197 TECPR2O15040 1411 aa28.33■■■□□ 2.13
SMIM20-201ENST00000506197 USP47Q96K76 1375 aa28.32■■■□□ 2.12
SMIM20-201ENST00000506197 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
SMIM20-201ENST00000506197 LRP6O75581 1613 aa28.29■■■□□ 2.12
SMIM20-201ENST00000506197 EIF4G2P78344 907 aaKnown RBP eCLIP28.28■■■□□ 2.12
SMIM20-201ENST00000506197 C1orf167Q5SNV9 1468 aa28.27■■■□□ 2.12
SMIM20-201ENST00000506197 QRICH2Q9H0J4 1663 aa28.27■■■□□ 2.12
SMIM20-201ENST00000506197 POGKQ9P215 609 aa28.26■■■□□ 2.11
SMIM20-201ENST00000506197 CDC42BPGQ6DT37 1551 aa28.24■■■□□ 2.11
SMIM20-201ENST00000506197 SIRT1Q96EB6 747 aa28.24■■■□□ 2.11
SMIM20-201ENST00000506197 PRAM1Q96QH2 718 aa28.23■■■□□ 2.11
SMIM20-201ENST00000506197 CENPJQ9HC77 1338 aaPredicted RBP28.22■■■□□ 2.11
SMIM20-201ENST00000506197 POTEAQ6S8J7 498 aa28.22■■■□□ 2.11
SMIM20-201ENST00000506197 HSPA5P11021 654 aaKnown RBP28.21■■■□□ 2.11
SMIM20-201ENST00000506197 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
SMIM20-201ENST00000506197 ST20-MTHFSA0A0A6YYL1 179 aa28.19■■■□□ 2.1
SMIM20-201ENST00000506197 WAPLQ7Z5K2 1190 aa28.19■■■□□ 2.1
SMIM20-201ENST00000506197 DDX17Q92841 729 aaKnown RBP28.19■■■□□ 2.1
SMIM20-201ENST00000506197 SAFB2Q14151 953 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMIM20-201ENST00000506197 PLEKHH1Q9ULM0 1364 aa28.18■■■□□ 2.1
SMIM20-201ENST00000506197 LRRC59Q96AG4 307 aaKnown RBP28.16■■■□□ 2.1
SMIM20-201ENST00000506197 ORAI2Q96SN7 254 aa28.14■■■□□ 2.1
SMIM20-201ENST00000506197 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
SMIM20-201ENST00000506197 NUTM2BA6NNL0 878 aaPredicted RBP28.12■■■□□ 2.09
SMIM20-201ENST00000506197 NUTM2EB1AL46 878 aaPredicted RBP28.12■■■□□ 2.09
SMIM20-201ENST00000506197 NUTM2AQ8IVF1 878 aaPredicted RBP28.12■■■□□ 2.09
SMIM20-201ENST00000506197 SBNO2Q9Y2G9 1366 aa28.11■■■□□ 2.09
SMIM20-201ENST00000506197 HIRIP3Q9BW71 556 aaPredicted RBP28.11■■■□□ 2.09
SMIM20-201ENST00000506197 MINK1Q8N4C8 1332 aaPredicted RBP28.11■■■□□ 2.09
SMIM20-201ENST00000506197 SLC24A1O60721 1099 aa28.1■■■□□ 2.09
SMIM20-201ENST00000506197 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
SMIM20-201ENST00000506197 ADGRB2O60241 1585 aa28.09■■■□□ 2.09
SMIM20-201ENST00000506197 ZNF772Q68DY9 489 aaPredicted RBP28.08■■■□□ 2.09
SMIM20-201ENST00000506197 SOS2Q07890 1332 aaPredicted RBP28.08■■■□□ 2.09
SMIM20-201ENST00000506197 TESK2Q96S53 571 aa28.07■■■□□ 2.08
SMIM20-201ENST00000506197 ESCO1Q5FWF5 840 aa28.05■■■□□ 2.08
SMIM20-201ENST00000506197 TMF1P82094 1093 aa28.04■■■□□ 2.08
SMIM20-201ENST00000506197 NPHP3Q7Z494 1330 aa28.03■■■□□ 2.08
SMIM20-201ENST00000506197 EVC2Q86UK5 1308 aa28.03■■■□□ 2.08
SMIM20-201ENST00000506197 TULP4Q9NRJ4 1543 aa28.02■■■□□ 2.08
SMIM20-201ENST00000506197 KIF1AQ12756 1690 aa28.01■■■□□ 2.07
SMIM20-201ENST00000506197 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
SMIM20-201ENST00000506197 NUTM2FA1L443 756 aa28.01■■■□□ 2.07
SMIM20-201ENST00000506197 PXDNQ92626 1479 aa28.01■■■□□ 2.07
SMIM20-201ENST00000506197 AFF2P51816 1311 aa27.99■■■□□ 2.07
SMIM20-201ENST00000506197 RGPD8O14715 1765 aaPredicted RBP27.99■■■□□ 2.07
SMIM20-201ENST00000506197 WASLO00401 505 aaPredicted RBP27.98■■■□□ 2.07
SMIM20-201ENST00000506197 CDCA8Q53HL2 280 aa27.97■■■□□ 2.07
SMIM20-201ENST00000506197 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
SMIM20-201ENST00000506197 SRPK2P78362 688 aaKnown RBP27.96■■■□□ 2.07
SMIM20-201ENST00000506197 CDK19Q9BWU1 502 aa27.96■■■□□ 2.07
SMIM20-201ENST00000506197 FOXO3O43524 673 aa27.95■■■□□ 2.06
SMIM20-201ENST00000506197 ADAMTS2O95450 1211 aa27.93■■■□□ 2.06
SMIM20-201ENST00000506197 XPCQ01831 940 aaPredicted RBP27.93■■■□□ 2.06
SMIM20-201ENST00000506197 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
SMIM20-201ENST00000506197 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
SMIM20-201ENST00000506197 POLR3GLQ9BT43 218 aa27.91■■■□□ 2.06
SMIM20-201ENST00000506197 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
SMIM20-201ENST00000506197 RXRBP28702 533 aa27.9■■■□□ 2.06
SMIM20-201ENST00000506197 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
SMIM20-201ENST00000506197 PUS7Q96PZ0 661 aaKnown RBP27.89■■■□□ 2.06
SMIM20-201ENST00000506197 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
SMIM20-201ENST00000506197 ATAD2Q6PL18 1390 aa27.88■■■□□ 2.05
SMIM20-201ENST00000506197 ANKARQ7Z5J8 1434 aa27.88■■■□□ 2.05
SMIM20-201ENST00000506197 CDK12Q9NYV4 1490 aaPredicted RBP27.88■■■□□ 2.05
SMIM20-201ENST00000506197 C11orf95C9JLR9 678 aaPredicted RBP27.87■■■□□ 2.05
SMIM20-201ENST00000506197 NGLY1Q96IV0 654 aa27.87■■■□□ 2.05
SMIM20-201ENST00000506197 KIF7Q2M1P5 1343 aa27.87■■■□□ 2.05
SMIM20-201ENST00000506197 ATP7BP35670 1465 aa27.86■■■□□ 2.05
SMIM20-201ENST00000506197 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
SMIM20-201ENST00000506197 CCDC7Q96M83 1385 aa27.86■■■□□ 2.05
SMIM20-201ENST00000506197 NUDT16Q96DE0 195 aaKnown RBP27.85■■■□□ 2.05
SMIM20-201ENST00000506197 PHF8Q9UPP1 1060 aa27.84■■■□□ 2.05
SMIM20-201ENST00000506197 MYOM1P52179 1685 aa27.83■■■□□ 2.05
SMIM20-201ENST00000506197 WASHC2AQ641Q2 1341 aa27.83■■■□□ 2.05
SMIM20-201ENST00000506197 QTRT2Q9H974 415 aaKnown RBP27.82■■■□□ 2.04
SMIM20-201ENST00000506197 PRR36Q9H6K5 1346 aa27.82■■■□□ 2.04
SMIM20-201ENST00000506197 SPATA31A3Q5VYP0 1347 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms