RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ANO8Q9HCE9 1232 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 BMP2KQ9NSY1 1161 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 FDX1P10109 184 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 GJA5P36382 358 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 ANKRD13AQ8IZ07 590 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 PTCD2Q8WV60 388 aaKnown RBP5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 C8orf37Q96NL8 207 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 OCEL1Q9H607 264 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 KDM4AO75164 1064 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 FXR2P51116 673 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 TSNAXIP1Q2TAA8 658 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 C6orf132Q5T0Z8 1188 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 LARP1Q6PKG0 1096 aaKnown RBP5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 ZMIZ1Q9ULJ6 1067 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 ABL1P00519 1130 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 SKIP12755 728 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PLCG2P16885 1265 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 SSFA2P28290 1259 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ERCC5P28715 1186 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PRSS12P56730 875 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ELOAQ14241 798 aaKnown RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 KANK4Q5T7N3 995 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PHLDB3Q6NSJ2 640 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 TMEM92Q6UXU6 159 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 FAM200AQ8TCP9 573 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 EPS8L1Q8TE68 723 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ATP2B4P23634 1241 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 DEPDC4Q8N2C3 294 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 CDCA7LQ96GN5 454 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 C6orf229H3BNL8 230 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 GPR37L1O60883 481 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 RASA1P20936 1047 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 MTMR2Q13614 643 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 NR6A1Q15406 480 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L2Q6R6M4 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 ZNF454Q8N9F8 522 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 RBM27Q9P2N5 1060 aaKnown RBP5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 PIK3CDO00329 1044 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 DNAJB2P25686 324 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 MAPK1P28482 360 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP46P62068 366 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 GUCA2AQ02747 115 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 NOM1Q5C9Z4 860 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 NPAS4Q8IUM7 802 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 DHX37Q8IY37 1157 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZDHHC16Q969W1 377 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 JPH4Q96JJ6 628 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 ANO2Q9NQ90 1003 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 MKRN1Q9UHC7 482 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L5A8MUK1 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L15C9J2P7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L10C9JJH3 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L13C9JLJ4 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L12C9JPN9 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L11C9JVI0 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L21D6R901 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L18D6R9N7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L22D6RA61 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L17D6RBQ6 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L19D6RCP7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L20D6RJB6 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 HOXA2O43364 376 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L24Q0WX57 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 GLYCTKQ8IVS8 523 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLF2Q8IX21 1173 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 TTC13Q8NBP0 860 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 H3BRB1 525 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 SCNN1AP37088 669 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 IRX5P78411 483 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 TAGLNQ01995 201 aaKnown RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 CRTC2Q53ET0 693 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 C9orf131Q5VYM1 1079 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 NUDT18Q6ZVK8 323 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 FAM9AQ8IZU1 332 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 HIRIP3Q9BW71 556 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 CDCA7Q9BWT1 371 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 TUT1Q9H6E5 874 aaKnown RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 CFAP99D6REC4 459 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 VAMP1P23763 118 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NR1H3Q13133 447 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZNF211Q13398 564 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZSCAN29Q8IWY8 852 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PIP4P2Q8N4L2 257 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 CLP1Q92989 425 aaKnown RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 HLA-CQ95604 372 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 EYA1Q99502 592 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 TANGO6Q9C0B7 1094 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PNMA3Q9UL41 463 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PCDHGC3Q9UN70 934 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NBPF26B4DH59 902 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SEC24BO95487 1268 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms