RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 FUT2Q10981 343 aa9.22□□□□□ -0.93
RFC1-208ENST00000504849 BRICD5Q6PL45 260 aa9.22□□□□□ -0.93
RFC1-208ENST00000504849 MSS51Q4VC12 460 aa9.21□□□□□ -0.94
RFC1-208ENST00000504849 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
RFC1-208ENST00000504849 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
RFC1-208ENST00000504849 SKOR1P84550 965 aa9.18□□□□□ -0.94
RFC1-208ENST00000504849 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
RFC1-208ENST00000504849 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
RFC1-208ENST00000504849 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
RFC1-208ENST00000504849 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
RFC1-208ENST00000504849 DCAF8L2P0C7V8 631 aa9.16□□□□□ -0.94
RFC1-208ENST00000504849 FECHP22830 423 aa9.15□□□□□ -0.94
RFC1-208ENST00000504849 MMP16P51512 607 aa9.15□□□□□ -0.94
RFC1-208ENST00000504849 RC3H1Q5TC82 1133 aaKnown RBP9.15□□□□□ -0.94
RFC1-208ENST00000504849 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
RFC1-208ENST00000504849 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
RFC1-208ENST00000504849 RASSF7Q02833 373 aa9.12□□□□□ -0.95
RFC1-208ENST00000504849 XP32Q5T750 250 aa9.12□□□□□ -0.95
RFC1-208ENST00000504849 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
RFC1-208ENST00000504849 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
RFC1-208ENST00000504849 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
RFC1-208ENST00000504849 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
RFC1-208ENST00000504849 GDF11O95390 407 aa9.1□□□□□ -0.95
RFC1-208ENST00000504849 OATP04181 439 aa9.1□□□□□ -0.95
RFC1-208ENST00000504849 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
RFC1-208ENST00000504849 ZFP42Q96MM3 310 aa9.1□□□□□ -0.95
RFC1-208ENST00000504849 SIAH2O43255 324 aa9.09□□□□□ -0.95
RFC1-208ENST00000504849 GCGRP47871 477 aa9.09□□□□□ -0.95
RFC1-208ENST00000504849 WNT7BP56706 349 aa9.09□□□□□ -0.95
RFC1-208ENST00000504849 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
RFC1-208ENST00000504849 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
RFC1-208ENST00000504849 KRTAP4-8Q9BYQ9 185 aa9.08□□□□□ -0.96
RFC1-208ENST00000504849 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
RFC1-208ENST00000504849 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
RFC1-208ENST00000504849 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
RFC1-208ENST00000504849 FCHSD2O94868 740 aa9.04□□□□□ -0.96
RFC1-208ENST00000504849 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
RFC1-208ENST00000504849 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
RFC1-208ENST00000504849 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
RFC1-208ENST00000504849 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
RFC1-208ENST00000504849 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
RFC1-208ENST00000504849 KRT76Q01546 638 aa8.98□□□□□ -0.97
RFC1-208ENST00000504849 CCDC24Q8N4L8 307 aa8.98□□□□□ -0.97
RFC1-208ENST00000504849 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
RFC1-208ENST00000504849 Q3C1V9 767 aa8.97□□□□□ -0.97
RFC1-208ENST00000504849 GPAT2Q6NUI2 795 aa8.97□□□□□ -0.97
RFC1-208ENST00000504849 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
RFC1-208ENST00000504849 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
RFC1-208ENST00000504849 MRPL14Q6P1L8 145 aaKnown RBP8.96□□□□□ -0.98
RFC1-208ENST00000504849 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
RFC1-208ENST00000504849 RNF225M0QZC1 329 aaPredicted RBP8.95□□□□□ -0.98
RFC1-208ENST00000504849 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
RFC1-208ENST00000504849 EHBP1Q8NDI1 1231 aa8.95□□□□□ -0.98
RFC1-208ENST00000504849 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
RFC1-208ENST00000504849 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
RFC1-208ENST00000504849 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
RFC1-208ENST00000504849 DNMT3AQ9Y6K1 912 aaPredicted RBP8.94□□□□□ -0.98
RFC1-208ENST00000504849 IGHA1P01876 353 aa8.93□□□□□ -0.98
RFC1-208ENST00000504849 HIC1Q14526 733 aa8.93□□□□□ -0.98
RFC1-208ENST00000504849 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
RFC1-208ENST00000504849 PPFIA3O75145 1194 aa8.92□□□□□ -0.98
RFC1-208ENST00000504849 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
RFC1-208ENST00000504849 SULF1Q8IWU6 871 aa8.92□□□□□ -0.98
RFC1-208ENST00000504849 TIMP2P16035 220 aa8.9□□□□□ -0.98
RFC1-208ENST00000504849 SH3BP2P78314 561 aa8.9□□□□□ -0.98
RFC1-208ENST00000504849 GPR161Q8N6U8 529 aaKnown RBP8.9□□□□□ -0.98
RFC1-208ENST00000504849 KCNV2Q8TDN2 545 aa8.9□□□□□ -0.98
RFC1-208ENST00000504849 HLA-CQ95604 372 aa8.9□□□□□ -0.98
RFC1-208ENST00000504849 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
RFC1-208ENST00000504849 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
RFC1-208ENST00000504849 KLF16Q9BXK1 252 aaPredicted RBP8.89□□□□□ -0.99
RFC1-208ENST00000504849 SCARF1Q14162 830 aa8.88□□□□□ -0.99
RFC1-208ENST00000504849 ZNF385CQ66K41 422 aaPredicted RBP8.88□□□□□ -0.99
RFC1-208ENST00000504849 JUNDP17535 347 aa8.87□□□□□ -0.99
RFC1-208ENST00000504849 NNTQ13423 1086 aa8.87□□□□□ -0.99
RFC1-208ENST00000504849 GPR37O15354 613 aa8.86□□□□□ -0.99
RFC1-208ENST00000504849 IRS1P35568 1242 aa8.86□□□□□ -0.99
RFC1-208ENST00000504849 CNTNAP3BQ96NU0 1288 aa8.86□□□□□ -0.99
RFC1-208ENST00000504849 CNTNAP3Q9BZ76 1288 aa8.86□□□□□ -0.99
RFC1-208ENST00000504849 ADAM23O75077 832 aa8.85□□□□□ -0.99
RFC1-208ENST00000504849 FOXK2Q01167 660 aa8.84□□□□□ -0.99
RFC1-208ENST00000504849 GNPATO15228 680 aa8.83□□□□□ -1
RFC1-208ENST00000504849 ARHGEF15O94989 841 aa8.83□□□□□ -1
RFC1-208ENST00000504849 CD46P15529 392 aa8.83□□□□□ -1
RFC1-208ENST00000504849 WHAMMQ8TF30 809 aa8.83□□□□□ -1
RFC1-208ENST00000504849 MAN1A2O60476 641 aa8.82□□□□□ -1
RFC1-208ENST00000504849 ADH1CP00326 375 aa8.82□□□□□ -1
RFC1-208ENST00000504849 WDR4P57081 412 aaKnown RBP8.82□□□□□ -1
RFC1-208ENST00000504849 MPNDQ8N594 471 aa8.82□□□□□ -1
RFC1-208ENST00000504849 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
RFC1-208ENST00000504849 KDM4AO75164 1064 aa8.8□□□□□ -1
RFC1-208ENST00000504849 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
RFC1-208ENST00000504849 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
RFC1-208ENST00000504849 KANK3Q6NY19 840 aa8.79□□□□□ -1
RFC1-208ENST00000504849 SYMPKQ92797 1274 aaKnown RBP8.79□□□□□ -1
RFC1-208ENST00000504849 COL25A1Q9BXS0 654 aaPredicted RBP8.79□□□□□ -1
RFC1-208ENST00000504849 SEMA3EO15041 775 aa8.78□□□□□ -1
RFC1-208ENST00000504849 GUCA2AQ02747 115 aa8.78□□□□□ -1
RFC1-208ENST00000504849 SVOPQ8N4V2 548 aa8.78□□□□□ -1
RFC1-208ENST00000504849 DNMT3LQ9UJW3 386 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms