RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
UBE2D3-217ENST00000504211 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
UBE2D3-217ENST00000504211 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
UBE2D3-217ENST00000504211 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
UBE2D3-217ENST00000504211 MTMR2Q13614 643 aa12.61□□□□□ -0.39
UBE2D3-217ENST00000504211 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
UBE2D3-217ENST00000504211 FBXO31Q5XUX0 539 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-217ENST00000504211 BRICD5Q6PL45 260 aa12.61□□□□□ -0.39
UBE2D3-217ENST00000504211 ZPR1O75312 459 aa12.6□□□□□ -0.39
UBE2D3-217ENST00000504211 ITGBL1O95965 494 aaPredicted RBP12.6□□□□□ -0.39
UBE2D3-217ENST00000504211 HRCP23327 699 aa12.6□□□□□ -0.39
UBE2D3-217ENST00000504211 RNF19BQ6ZMZ0 732 aa12.6□□□□□ -0.39
UBE2D3-217ENST00000504211 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
UBE2D3-217ENST00000504211 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
UBE2D3-217ENST00000504211 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-217ENST00000504211 RETREG3Q86VR2 466 aa12.58□□□□□ -0.4
UBE2D3-217ENST00000504211 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-217ENST00000504211 RFC5P40937 340 aa12.57□□□□□ -0.4
UBE2D3-217ENST00000504211 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-217ENST00000504211 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-217ENST00000504211 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-217ENST00000504211 TLL1O43897 1013 aa12.54□□□□□ -0.4
UBE2D3-217ENST00000504211 ADH1BP00325 375 aa12.54□□□□□ -0.4
UBE2D3-217ENST00000504211 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
UBE2D3-217ENST00000504211 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
UBE2D3-217ENST00000504211 SPSB2Q99619 263 aa12.53□□□□□ -0.4
UBE2D3-217ENST00000504211 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
UBE2D3-217ENST00000504211 KCNC4Q03721 635 aa12.51□□□□□ -0.41
UBE2D3-217ENST00000504211 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
UBE2D3-217ENST00000504211 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
UBE2D3-217ENST00000504211 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
UBE2D3-217ENST00000504211 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-217ENST00000504211 BANK1Q8NDB2 785 aa12.49□□□□□ -0.41
UBE2D3-217ENST00000504211 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-217ENST00000504211 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
UBE2D3-217ENST00000504211 IFFO2Q5TF58 517 aa12.46□□□□□ -0.41
UBE2D3-217ENST00000504211 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-217ENST00000504211 JUNDP17535 347 aa12.45□□□□□ -0.42
UBE2D3-217ENST00000504211 MMP16P51512 607 aa12.45□□□□□ -0.42
UBE2D3-217ENST00000504211 SOCS7O14512 581 aa12.44□□□□□ -0.42
UBE2D3-217ENST00000504211 AP1G2O75843 785 aa12.44□□□□□ -0.42
UBE2D3-217ENST00000504211 PRDM9Q9NQV7 894 aa12.44□□□□□ -0.42
UBE2D3-217ENST00000504211 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
UBE2D3-217ENST00000504211 SLC6A16Q9GZN6 736 aa12.43□□□□□ -0.42
UBE2D3-217ENST00000504211 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
UBE2D3-217ENST00000504211 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
UBE2D3-217ENST00000504211 FLIIQ13045 1269 aa12.41□□□□□ -0.42
UBE2D3-217ENST00000504211 MCM6Q14566 821 aa12.41□□□□□ -0.42
UBE2D3-217ENST00000504211 S1PR4O95977 384 aa12.4□□□□□ -0.42
UBE2D3-217ENST00000504211 PTPRNQ16849 979 aa12.4□□□□□ -0.42
UBE2D3-217ENST00000504211 TSC1Q92574 1164 aa12.4□□□□□ -0.42
UBE2D3-217ENST00000504211 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-217ENST00000504211 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
UBE2D3-217ENST00000504211 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
UBE2D3-217ENST00000504211 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
UBE2D3-217ENST00000504211 LRRN4Q8WUT4 740 aa12.35□□□□□ -0.43
UBE2D3-217ENST00000504211 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-217ENST00000504211 CCNYL3P0C7X3 344 aa12.34□□□□□ -0.43
UBE2D3-217ENST00000504211 GGCXP38435 758 aa12.34□□□□□ -0.43
UBE2D3-217ENST00000504211 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
UBE2D3-217ENST00000504211 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-217ENST00000504211 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
UBE2D3-217ENST00000504211 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
UBE2D3-217ENST00000504211 APBB1O00213 710 aa12.32□□□□□ -0.44
UBE2D3-217ENST00000504211 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
UBE2D3-217ENST00000504211 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-217ENST00000504211 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
UBE2D3-217ENST00000504211 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-217ENST00000504211 FCF1Q9Y324 198 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-217ENST00000504211 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
UBE2D3-217ENST00000504211 TRIM34Q9BYJ4 488 aa12.3□□□□□ -0.44
UBE2D3-217ENST00000504211 A0A0G2JS52 829 aa12.28□□□□□ -0.44
UBE2D3-217ENST00000504211 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
UBE2D3-217ENST00000504211 MAP10Q9P2G4 905 aa12.28□□□□□ -0.44
UBE2D3-217ENST00000504211 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-217ENST00000504211 NR6A1Q15406 480 aa12.26□□□□□ -0.45
UBE2D3-217ENST00000504211 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
UBE2D3-217ENST00000504211 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-217ENST00000504211 EPS8L1Q8TE68 723 aa12.24□□□□□ -0.45
UBE2D3-217ENST00000504211 NDUFB9Q9Y6M9 179 aa12.24□□□□□ -0.45
UBE2D3-217ENST00000504211 GPR37L1O60883 481 aa12.23□□□□□ -0.45
UBE2D3-217ENST00000504211 CTHP32929 405 aa12.23□□□□□ -0.45
UBE2D3-217ENST00000504211 PLA2G2CQ5R387 149 aa12.23□□□□□ -0.45
UBE2D3-217ENST00000504211 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-217ENST00000504211 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
UBE2D3-217ENST00000504211 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
UBE2D3-217ENST00000504211 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
UBE2D3-217ENST00000504211 C14orf37Q86TY3 774 aa12.21□□□□□ -0.45
UBE2D3-217ENST00000504211 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
UBE2D3-217ENST00000504211 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-217ENST00000504211 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
UBE2D3-217ENST00000504211 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
UBE2D3-217ENST00000504211 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
UBE2D3-217ENST00000504211 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
UBE2D3-217ENST00000504211 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms