RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
NFKB1-203ENST00000502367 GGCXP38435 758 aa11.09□□□□□ -0.63
NFKB1-203ENST00000502367 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
NFKB1-203ENST00000502367 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
NFKB1-203ENST00000502367 CSPP1Q1MSJ5 1256 aa11.08□□□□□ -0.64
NFKB1-203ENST00000502367 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
NFKB1-203ENST00000502367 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
NFKB1-203ENST00000502367 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
NFKB1-203ENST00000502367 FCF1Q9Y324 198 aaKnown RBP11.07□□□□□ -0.64
NFKB1-203ENST00000502367 C6orf229H3BNL8 230 aa11.06□□□□□ -0.64
NFKB1-203ENST00000502367 Q3C1V9 767 aa11.06□□□□□ -0.64
NFKB1-203ENST00000502367 LIMD1Q9UGP4 676 aa11.06□□□□□ -0.64
NFKB1-203ENST00000502367 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
NFKB1-203ENST00000502367 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
NFKB1-203ENST00000502367 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
NFKB1-203ENST00000502367 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
NFKB1-203ENST00000502367 RGS20O76081 388 aa11.04□□□□□ -0.64
NFKB1-203ENST00000502367 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-203ENST00000502367 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
NFKB1-203ENST00000502367 SLC19A1P41440 591 aa11.03□□□□□ -0.64
NFKB1-203ENST00000502367 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
NFKB1-203ENST00000502367 PLEKHG3A1L390 1219 aa11.02□□□□□ -0.65
NFKB1-203ENST00000502367 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
NFKB1-203ENST00000502367 MSS51Q4VC12 460 aa11.02□□□□□ -0.65
NFKB1-203ENST00000502367 SPTLC1O15269 473 aa11.01□□□□□ -0.65
NFKB1-203ENST00000502367 QPCTQ16769 361 aa11□□□□□ -0.65
NFKB1-203ENST00000502367 HRCP23327 699 aa10.99□□□□□ -0.65
NFKB1-203ENST00000502367 MMP16P51512 607 aa10.99□□□□□ -0.65
NFKB1-203ENST00000502367 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-203ENST00000502367 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-203ENST00000502367 CCDC24Q8N4L8 307 aa10.99□□□□□ -0.65
NFKB1-203ENST00000502367 V9GY48 417 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-203ENST00000502367 DXOO77932 396 aaKnown RBP10.98□□□□□ -0.65
NFKB1-203ENST00000502367 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
NFKB1-203ENST00000502367 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
NFKB1-203ENST00000502367 PRR7Q8TB68 274 aa10.98□□□□□ -0.65
NFKB1-203ENST00000502367 MTMR2Q13614 643 aa10.97□□□□□ -0.65
NFKB1-203ENST00000502367 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-203ENST00000502367 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
NFKB1-203ENST00000502367 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-203ENST00000502367 CFAP99D6REC4 459 aa10.96□□□□□ -0.65
NFKB1-203ENST00000502367 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
NFKB1-203ENST00000502367 JUNDP17535 347 aa10.95□□□□□ -0.66
NFKB1-203ENST00000502367 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
NFKB1-203ENST00000502367 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-203ENST00000502367 PTCRAQ6ISU1 281 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-203ENST00000502367 GFRA3O60609 400 aa10.93□□□□□ -0.66
NFKB1-203ENST00000502367 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
NFKB1-203ENST00000502367 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
NFKB1-203ENST00000502367 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 ZNF598Q86UK7 904 aaKnown RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 TSC1Q92574 1164 aa10.92□□□□□ -0.66
NFKB1-203ENST00000502367 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-203ENST00000502367 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
NFKB1-203ENST00000502367 FOXC1Q12948 553 aa10.91□□□□□ -0.66
NFKB1-203ENST00000502367 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
NFKB1-203ENST00000502367 PER1O15534 1290 aaPredicted RBP10.9□□□□□ -0.66
NFKB1-203ENST00000502367 LILRB3O75022 631 aa10.9□□□□□ -0.66
NFKB1-203ENST00000502367 GJA5P36382 358 aa10.9□□□□□ -0.66
NFKB1-203ENST00000502367 NUDT12Q9BQG2 462 aa10.9□□□□□ -0.66
NFKB1-203ENST00000502367 PDZRN3Q9UPQ7 1066 aa10.9□□□□□ -0.66
NFKB1-203ENST00000502367 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
NFKB1-203ENST00000502367 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
NFKB1-203ENST00000502367 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
NFKB1-203ENST00000502367 ZBTB24O43167 697 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-203ENST00000502367 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
NFKB1-203ENST00000502367 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
NFKB1-203ENST00000502367 GDF9O60383 454 aa10.86□□□□□ -0.67
NFKB1-203ENST00000502367 RPIAP49247 311 aa10.86□□□□□ -0.67
NFKB1-203ENST00000502367 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
NFKB1-203ENST00000502367 PRPF38BQ5VTL8 546 aaKnown RBP10.86□□□□□ -0.67
NFKB1-203ENST00000502367 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
NFKB1-203ENST00000502367 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
NFKB1-203ENST00000502367 SKOR1P84550 965 aa10.85□□□□□ -0.67
NFKB1-203ENST00000502367 TRIM32Q13049 653 aa10.85□□□□□ -0.67
NFKB1-203ENST00000502367 LCE2BO14633 110 aa10.84□□□□□ -0.67
NFKB1-203ENST00000502367 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
NFKB1-203ENST00000502367 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
NFKB1-203ENST00000502367 CTDSPL2Q05D32 466 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 LYPD8Q6UX82 237 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 Q6ZNB5 142 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
NFKB1-203ENST00000502367 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
NFKB1-203ENST00000502367 PTPRNQ16849 979 aa10.82□□□□□ -0.68
NFKB1-203ENST00000502367 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
NFKB1-203ENST00000502367 CTHP32929 405 aa10.81□□□□□ -0.68
NFKB1-203ENST00000502367 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
NFKB1-203ENST00000502367 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
NFKB1-203ENST00000502367 BAP1Q92560 729 aa10.8□□□□□ -0.68
NFKB1-203ENST00000502367 UNC93B1Q9H1C4 597 aa10.8□□□□□ -0.68
NFKB1-203ENST00000502367 NRG2O14511 850 aaPredicted RBP10.79□□□□□ -0.68
NFKB1-203ENST00000502367 LRRN4Q8WUT4 740 aa10.78□□□□□ -0.68
NFKB1-203ENST00000502367 MRGPRX2Q96LB1 330 aa10.77□□□□□ -0.69
NFKB1-203ENST00000502367 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-203ENST00000502367 SH3BP2P78314 561 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms