RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 HELBQ8NG08 1087 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P21-201ENST00000502313 TSC1Q92574 1164 aa6.68□□□□□ -1.34
HMGB1P21-201ENST00000502313 MARVELD3Q96A59 401 aa6.68□□□□□ -1.34
HMGB1P21-201ENST00000502313 SNRKQ9NRH2 765 aa6.68□□□□□ -1.34
HMGB1P21-201ENST00000502313 KIAA1468Q9P260 1216 aa6.68□□□□□ -1.34
HMGB1P21-201ENST00000502313 FDX1P10109 184 aa6.67□□□□□ -1.34
HMGB1P21-201ENST00000502313 NDUFV2P19404 249 aa6.67□□□□□ -1.34
HMGB1P21-201ENST00000502313 PRPF38BQ5VTL8 546 aaKnown RBP6.67□□□□□ -1.34
HMGB1P21-201ENST00000502313 ERBB3P21860 1342 aa6.67□□□□□ -1.34
HMGB1P21-201ENST00000502313 SLF2Q8IX21 1173 aa6.66□□□□□ -1.34
HMGB1P21-201ENST00000502313 CHMP4AQ9BY43 222 aa6.66□□□□□ -1.34
HMGB1P21-201ENST00000502313 GDPD2Q9HCC8 539 aa6.66□□□□□ -1.34
HMGB1P21-201ENST00000502313 HOXA2O43364 376 aa6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 USP17L8P0C7I0 530 aa6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 QPCTQ16769 361 aa6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 SWT1Q5T5J6 900 aaKnown RBP6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 NBPF3Q9H094 633 aa6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 SEPT9Q9UHD8 586 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 RABGEF1Q9UJ41 708 aa6.65□□□□□ -1.34
HMGB1P21-201ENST00000502313 SOCS7O14512 581 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 ARHGAP33O14559 1287 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 LILRB3O75022 631 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 GCGRP47871 477 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 MTMR14Q8NCE2 650 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 CABLES1Q8TDN4 633 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 ZBED2Q9BTP6 218 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
HMGB1P21-201ENST00000502313 C6orf229H3BNL8 230 aa6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 PBX2P40425 430 aa6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 MTMR2Q13614 643 aa6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 FAM98CQ17RN3 349 aaKnown RBP6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 KMT5BQ4FZB7 885 aa6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 VARS2Q5ST30 1063 aaKnown RBP6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
HMGB1P21-201ENST00000502313 C3orf80F5H4A9 247 aa6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 CFHP08603 1231 aa6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 PSEN2P49810 448 aa6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 STAC3Q96MF2 364 aa6.62□□□□□ -1.35
HMGB1P21-201ENST00000502313 EMP3P54852 163 aa6.61□□□□□ -1.35
HMGB1P21-201ENST00000502313 TBC1D2BQ9UPU7 963 aa6.61□□□□□ -1.35
HMGB1P21-201ENST00000502313 ACIN1Q9UKV3 1341 aaKnown RBP6.6□□□□□ -1.35
HMGB1P21-201ENST00000502313 WASHC4Q2M389 1173 aa6.6□□□□□ -1.35
HMGB1P21-201ENST00000502313 GUCA2AQ02747 115 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 SAMD7Q7Z3H4 446 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 LAPTM4BQ86VI4 370 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 GLMNQ92990 594 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 PRR14Q9BWN1 585 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 SLC4A5Q9BY07 1137 aa6.59□□□□□ -1.35
HMGB1P21-201ENST00000502313 GOLGA8CPA6NN73 597 aa6.58□□□□□ -1.36
HMGB1P21-201ENST00000502313 PDE4CQ08493 712 aa6.58□□□□□ -1.36
HMGB1P21-201ENST00000502313 FUT2Q10981 343 aa6.58□□□□□ -1.36
HMGB1P21-201ENST00000502313 FAM177A1Q8N128 213 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P21-201ENST00000502313 LRCH3Q96II8 777 aa6.58□□□□□ -1.36
HMGB1P21-201ENST00000502313 PPP1R15AO75807 674 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 SLC10A3P09131 477 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 ATP6V1AP38606 617 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 Q3C1V9 767 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 FBXO31Q5XUX0 539 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 MRPL50Q8N5N7 158 aaKnown RBP6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 SCRIBQ14160 1630 aa6.57□□□□□ -1.36
HMGB1P21-201ENST00000502313 FAM205CA6NFA0 338 aa6.56□□□□□ -1.36
HMGB1P21-201ENST00000502313 SPNS2Q8IVW8 549 aa6.56□□□□□ -1.36
HMGB1P21-201ENST00000502313 HS3ST6Q96QI5 342 aa6.56□□□□□ -1.36
HMGB1P21-201ENST00000502313 VPS9D1Q9Y2B5 631 aa6.56□□□□□ -1.36
HMGB1P21-201ENST00000502313 AMOTL2Q9Y2J4 779 aa6.56□□□□□ -1.36
HMGB1P21-201ENST00000502313 UNCXA6NJT0 531 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 KCNA1Q09470 495 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 DMRTA1Q5VZB9 504 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 PRR7Q8TB68 274 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 HLA-CQ95604 372 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 PCDHGC3Q9UN70 934 aa6.55□□□□□ -1.36
HMGB1P21-201ENST00000502313 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 PATL2C9JE40 543 aaKnown RBP6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 ZFRQ96KR1 1074 aaKnown RBP6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 MYT1LQ9UL68 1186 aa6.54□□□□□ -1.36
HMGB1P21-201ENST00000502313 BRD1O95696 1058 aa6.53□□□□□ -1.36
HMGB1P21-201ENST00000502313 RETREG3Q86VR2 466 aa6.53□□□□□ -1.36
HMGB1P21-201ENST00000502313 ANKK1Q8NFD2 765 aa6.53□□□□□ -1.36
HMGB1P21-201ENST00000502313 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 TK2O00142 265 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 SOX11P35716 441 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 MMRN1Q13201 1228 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 ZNF687Q8N1G0 1237 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 HMX1Q9NP08 348 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P21-201ENST00000502313 VAC14Q08AM6 782 aa6.51□□□□□ -1.37
HMGB1P21-201ENST00000502313 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
HMGB1P21-201ENST00000502313 GJD4Q96KN9 370 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 359.5 ms