RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TRAIPQ9BWF2 469 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 NPDC1Q9NQX5 325 aaPredicted RBP5.51□□□□□ -1.53
CLTC-209ENST00000498711 REREQ9P2R6 1566 aa5.5□□□□□ -1.53
CLTC-209ENST00000498711 ATN1P54259 1190 aaPredicted RBP5.5□□□□□ -1.53
CLTC-209ENST00000498711 DENND4BO75064 1496 aaPredicted RBP5.5□□□□□ -1.53
CLTC-209ENST00000498711 SPDYE5A6NIY4 337 aa5.5□□□□□ -1.53
CLTC-209ENST00000498711 MAP3K7O43318 606 aa5.5□□□□□ -1.53
CLTC-209ENST00000498711 TMEM92Q6UXU6 159 aa5.5□□□□□ -1.53
CLTC-209ENST00000498711 KCTD17Q8N5Z5 321 aa5.5□□□□□ -1.53
CLTC-209ENST00000498711 L3MBTL3Q96JM7 780 aaPredicted RBP5.5□□□□□ -1.53
CLTC-209ENST00000498711 GCC2Q8IWJ2 1684 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 EPAS1Q99814 870 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 NAIPQ13075 1403 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 NCOA2Q15596 1464 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 CCDC18Q5T9S5 1454 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 EHBP1L1Q8N3D4 1523 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 PHF14O94880 888 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 PLCG2P16885 1265 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 PROCA1Q8NCQ7 364 aaPredicted RBP5.49□□□□□ -1.53
CLTC-209ENST00000498711 PTCD2Q8WV60 388 aaKnown RBP5.49□□□□□ -1.53
CLTC-209ENST00000498711 ANP32EQ9BTT0 268 aa5.49□□□□□ -1.53
CLTC-209ENST00000498711 FAM217BQ9NTX9 383 aaPredicted RBP5.49□□□□□ -1.53
CLTC-209ENST00000498711 FHOD3Q2V2M9 1422 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 SIN3AQ96ST3 1273 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLTC-209ENST00000498711 ANO8Q9HCE9 1232 aaPredicted RBP5.48□□□□□ -1.53
CLTC-209ENST00000498711 POLR3EQ9NVU0 708 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 MYOM3Q5VTT5 1437 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 COG6Q9Y2V7 657 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 ARHGEF40Q8TER5 1519 aa5.48□□□□□ -1.53
CLTC-209ENST00000498711 MYSM1Q5VVJ2 828 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 PLSCR2Q9NRY7 297 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 MAGI2Q86UL8 1455 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 SUPT6HQ7KZ85 1726 aaKnown RBP5.47□□□□□ -1.53
CLTC-209ENST00000498711 FAM135AQ9P2D6 1515 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 MYO5CQ9NQX4 1742 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 NUP153P49790 1475 aaKnown RBP5.47□□□□□ -1.53
CLTC-209ENST00000498711 CLK2P49760 499 aaKnown RBP5.47□□□□□ -1.53
CLTC-209ENST00000498711 ERICH6BQ5W0A0 696 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 METTL3Q86U44 580 aaKnown RBP5.47□□□□□ -1.53
CLTC-209ENST00000498711 BANK1Q8NDB2 785 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 DCBLD2Q96PD2 775 aa5.47□□□□□ -1.53
CLTC-209ENST00000498711 RICTORQ6R327 1708 aa5.46□□□□□ -1.53
CLTC-209ENST00000498711 ATMINO43313 823 aaPredicted RBP5.46□□□□□ -1.54
CLTC-209ENST00000498711 OATP04181 439 aa5.46□□□□□ -1.54
CLTC-209ENST00000498711 ASTLQ6HA08 431 aaPredicted RBP5.46□□□□□ -1.54
CLTC-209ENST00000498711 TSR1Q2NL82 804 aaKnown RBP5.46□□□□□ -1.54
CLTC-209ENST00000498711 RBM33Q96EV2 1170 aaKnown RBP5.46□□□□□ -1.54
CLTC-209ENST00000498711 FRMPD1Q5SYB0 1578 aa5.46□□□□□ -1.54
CLTC-209ENST00000498711 KIF14Q15058 1648 aa5.46□□□□□ -1.54
CLTC-209ENST00000498711 DDX10Q13206 875 aaKnown RBP5.45□□□□□ -1.54
CLTC-209ENST00000498711 LHX8Q68G74 356 aa5.45□□□□□ -1.54
CLTC-209ENST00000498711 ZNF330Q9Y3S2 320 aaPredicted RBP5.45□□□□□ -1.54
CLTC-209ENST00000498711 MIA2Q96PC5 1412 aa5.45□□□□□ -1.54
CLTC-209ENST00000498711 ATP10BO94823 1461 aa5.45□□□□□ -1.54
CLTC-209ENST00000498711 RFC5P40937 340 aa5.45□□□□□ -1.54
CLTC-209ENST00000498711 PREX2Q70Z35 1606 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 SLC34A2O95436 690 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 DIXDC1Q155Q3 683 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 SLAIN1Q8ND83 568 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 SLC39A7Q92504 469 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 POLR1AO95602 1720 aaPredicted RBP5.44□□□□□ -1.54
CLTC-209ENST00000498711 POTEIP0CG38 1075 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 C7P10643 843 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 AEBP1Q8IUX7 1158 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 PCDHGA10Q9Y5H3 936 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 ADAMTSL3P82987 1691 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 KDM5CP41229 1560 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 FAM161AQ3B820 660 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 TYW1BQ6NUM6 668 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 RETREG2Q8NC44 543 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 PXYLP1Q8TE99 480 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 TBC1D2Q9BYX2 928 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 SNRKQ9NRH2 765 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 PCDH10Q9P2E7 1040 aa5.44□□□□□ -1.54
CLTC-209ENST00000498711 TSPOAP1O95153 1857 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 ROCK1Q13464 1354 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 TMEM259Q4ZIN3 620 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 CERKQ8TCT0 537 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 NLRP7Q8WX94 980 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 FBXW7Q969H0 707 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 ANP32CO43423 234 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 MAMSTRQ6ZN01 415 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 WWC1Q8IX03 1113 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 BCORL1Q5H9F3 1711 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 NCOA1Q15788 1441 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 SPATA31E1Q6ZUB1 1445 aa5.43□□□□□ -1.54
CLTC-209ENST00000498711 ITSN2Q9NZM3 1697 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 FAM50AQ14320 339 aaKnown RBP5.42□□□□□ -1.54
CLTC-209ENST00000498711 PADI6Q6TGC4 694 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 ADGRG1Q9Y653 693 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 CD109Q6YHK3 1445 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 FANCIQ9NVI1 1328 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLTC-209ENST00000498711 TONSLQ96HA7 1378 aa5.42□□□□□ -1.54
CLTC-209ENST00000498711 ITGAEP38570 1179 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 PPP2R2DQ66LE6 453 aa5.41□□□□□ -1.54
CLTC-209ENST00000498711 RBM19Q9Y4C8 960 aaKnown RBP5.41□□□□□ -1.54
CLTC-209ENST00000498711 SEC24BO95487 1268 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms