RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 WAPLQ7Z5K2 1190 aa23.19■■□□□ 1.3
COL1A2-212ENST00000497316 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
COL1A2-212ENST00000497316 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
COL1A2-212ENST00000497316 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
COL1A2-212ENST00000497316 BRINP3Q76B58 766 aa23.14■■□□□ 1.29
COL1A2-212ENST00000497316 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
COL1A2-212ENST00000497316 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
COL1A2-212ENST00000497316 AHDC1Q5TGY3 1603 aaPredicted RBP23.12■■□□□ 1.29
COL1A2-212ENST00000497316 TRAK1Q9UPV9 953 aa23.12■■□□□ 1.29
COL1A2-212ENST00000497316 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
COL1A2-212ENST00000497316 POGKQ9P215 609 aa23.1■■□□□ 1.29
COL1A2-212ENST00000497316 NBPF1Q3BBV0 1214 aa23.08■■□□□ 1.29
COL1A2-212ENST00000497316 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
COL1A2-212ENST00000497316 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
COL1A2-212ENST00000497316 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.28
COL1A2-212ENST00000497316 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.28
COL1A2-212ENST00000497316 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
COL1A2-212ENST00000497316 FMN2Q9NZ56 1722 aa23.07■■□□□ 1.28
COL1A2-212ENST00000497316 NHSL1Q5SYE7 1610 aa23.07■■□□□ 1.28
COL1A2-212ENST00000497316 TRPM1Q7Z4N2 1603 aa23.06■■□□□ 1.28
COL1A2-212ENST00000497316 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
COL1A2-212ENST00000497316 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
COL1A2-212ENST00000497316 JCADQ9P266 1359 aa23.02■■□□□ 1.28
COL1A2-212ENST00000497316 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
COL1A2-212ENST00000497316 ESCO1Q5FWF5 840 aa22.99■■□□□ 1.27
COL1A2-212ENST00000497316 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
COL1A2-212ENST00000497316 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
COL1A2-212ENST00000497316 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
COL1A2-212ENST00000497316 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
COL1A2-212ENST00000497316 NUTM2FA1L443 756 aa22.97■■□□□ 1.27
COL1A2-212ENST00000497316 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
COL1A2-212ENST00000497316 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
COL1A2-212ENST00000497316 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
COL1A2-212ENST00000497316 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
COL1A2-212ENST00000497316 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
COL1A2-212ENST00000497316 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
COL1A2-212ENST00000497316 SHPRHQ149N8 1683 aa22.96■■□□□ 1.27
COL1A2-212ENST00000497316 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
COL1A2-212ENST00000497316 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
COL1A2-212ENST00000497316 CENPJQ9HC77 1338 aaPredicted RBP22.94■■□□□ 1.26
COL1A2-212ENST00000497316 DDX17Q92841 729 aaKnown RBP22.94■■□□□ 1.26
COL1A2-212ENST00000497316 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
COL1A2-212ENST00000497316 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
COL1A2-212ENST00000497316 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
COL1A2-212ENST00000497316 RALGAPBQ86X10 1494 aa22.93■■□□□ 1.26
COL1A2-212ENST00000497316 SPATA31A6Q5VVP1 1343 aa22.93■■□□□ 1.26
COL1A2-212ENST00000497316 RGS17Q9UGC6 210 aaPredicted RBP22.92■■□□□ 1.26
COL1A2-212ENST00000497316 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
COL1A2-212ENST00000497316 FOXO3O43524 673 aa22.9■■□□□ 1.26
COL1A2-212ENST00000497316 PXDNQ92626 1479 aa22.9■■□□□ 1.26
COL1A2-212ENST00000497316 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.25
COL1A2-212ENST00000497316 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
COL1A2-212ENST00000497316 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
COL1A2-212ENST00000497316 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
COL1A2-212ENST00000497316 QRICH2Q9H0J4 1663 aa22.87■■□□□ 1.25
COL1A2-212ENST00000497316 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
COL1A2-212ENST00000497316 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
COL1A2-212ENST00000497316 ATP7BP35670 1465 aa22.85■■□□□ 1.25
COL1A2-212ENST00000497316 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
COL1A2-212ENST00000497316 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
COL1A2-212ENST00000497316 POTEAQ6S8J7 498 aa22.83■■□□□ 1.25
COL1A2-212ENST00000497316 PSME1Q06323 249 aa22.82■■□□□ 1.24
COL1A2-212ENST00000497316 KRT28Q7Z3Y7 464 aa22.82■■□□□ 1.24
COL1A2-212ENST00000497316 LRP6O75581 1613 aa22.82■■□□□ 1.24
COL1A2-212ENST00000497316 SBNO2Q9Y2G9 1366 aa22.81■■□□□ 1.24
COL1A2-212ENST00000497316 PMFBP1Q8TBY8 1022 aa22.81■■□□□ 1.24
COL1A2-212ENST00000497316 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
COL1A2-212ENST00000497316 COL22A1Q8NFW1 1626 aaPredicted RBP22.81■■□□□ 1.24
COL1A2-212ENST00000497316 XPCQ01831 940 aaPredicted RBP22.8■■□□□ 1.24
COL1A2-212ENST00000497316 SPATA31A3Q5VYP0 1347 aa22.8■■□□□ 1.24
COL1A2-212ENST00000497316 SBNO1A3KN83 1393 aa22.79■■□□□ 1.24
COL1A2-212ENST00000497316 TOPAZ1Q8N9V7 1692 aa22.79■■□□□ 1.24
COL1A2-212ENST00000497316 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
COL1A2-212ENST00000497316 EVC2Q86UK5 1308 aa22.79■■□□□ 1.24
COL1A2-212ENST00000497316 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
COL1A2-212ENST00000497316 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
COL1A2-212ENST00000497316 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
COL1A2-212ENST00000497316 PLEKHG3A1L390 1219 aa22.77■■□□□ 1.24
COL1A2-212ENST00000497316 SRPK2P78362 688 aaKnown RBP22.77■■□□□ 1.24
COL1A2-212ENST00000497316 TNS3Q68CZ2 1445 aa22.75■■□□□ 1.23
COL1A2-212ENST00000497316 NGDNQ8NEJ9 315 aaKnown RBP22.75■■□□□ 1.23
COL1A2-212ENST00000497316 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
COL1A2-212ENST00000497316 CABP2Q9NPB3 220 aa22.74■■□□□ 1.23
COL1A2-212ENST00000497316 TRPM3Q9HCF6 1732 aaPredicted RBP22.74■■□□□ 1.23
COL1A2-212ENST00000497316 ARHGEF10O15013 1369 aa22.72■■□□□ 1.23
COL1A2-212ENST00000497316 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
COL1A2-212ENST00000497316 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
COL1A2-212ENST00000497316 ACEP12821 1306 aa22.7■■□□□ 1.22
COL1A2-212ENST00000497316 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
COL1A2-212ENST00000497316 ATAD2Q6PL18 1390 aa22.68■■□□□ 1.22
COL1A2-212ENST00000497316 ST20-MTHFSA0A0A6YYL1 179 aa22.67■■□□□ 1.22
COL1A2-212ENST00000497316 PUS7Q96PZ0 661 aaKnown RBP22.67■■□□□ 1.22
COL1A2-212ENST00000497316 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
COL1A2-212ENST00000497316 USP47Q96K76 1375 aa22.66■■□□□ 1.22
COL1A2-212ENST00000497316 TESK2Q96S53 571 aa22.66■■□□□ 1.22
COL1A2-212ENST00000497316 CABP1Q9NZU7 370 aa22.66■■□□□ 1.22
COL1A2-212ENST00000497316 AFF2P51816 1311 aa22.65■■□□□ 1.22
COL1A2-212ENST00000497316 RXRBP28702 533 aa22.65■■□□□ 1.22
COL1A2-212ENST00000497316 ADAMTS2O95450 1211 aa22.64■■□□□ 1.21
COL1A2-212ENST00000497316 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms