RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 C11orf95C9JLR9 678 aaPredicted RBP10.31□□□□□ -0.76
TRIM4-205ENST00000496896 WIPF1O43516 503 aa10.31□□□□□ -0.76
TRIM4-205ENST00000496896 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
TRIM4-205ENST00000496896 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
TRIM4-205ENST00000496896 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
TRIM4-205ENST00000496896 AXIN1O15169 862 aa10.3□□□□□ -0.76
TRIM4-205ENST00000496896 AVPP01185 164 aa10.3□□□□□ -0.76
TRIM4-205ENST00000496896 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
TRIM4-205ENST00000496896 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
TRIM4-205ENST00000496896 GRIPAP1Q4V328 841 aa10.3□□□□□ -0.76
TRIM4-205ENST00000496896 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
TRIM4-205ENST00000496896 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
TRIM4-205ENST00000496896 USP46P62068 366 aa10.29□□□□□ -0.76
TRIM4-205ENST00000496896 FUT2Q10981 343 aa10.29□□□□□ -0.76
TRIM4-205ENST00000496896 MORN1Q5T089 497 aa10.29□□□□□ -0.76
TRIM4-205ENST00000496896 CTC1Q2NKJ3 1217 aa10.28□□□□□ -0.76
TRIM4-205ENST00000496896 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
TRIM4-205ENST00000496896 KDM4AO75164 1064 aa10.27□□□□□ -0.77
TRIM4-205ENST00000496896 SSTR3P32745 418 aaPredicted RBP10.27□□□□□ -0.77
TRIM4-205ENST00000496896 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.77
TRIM4-205ENST00000496896 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
TRIM4-205ENST00000496896 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
TRIM4-205ENST00000496896 TOR4AQ9NXH8 423 aa10.26□□□□□ -0.77
TRIM4-205ENST00000496896 PDE4DQ08499 809 aa10.25□□□□□ -0.77
TRIM4-205ENST00000496896 RPIAP49247 311 aa10.24□□□□□ -0.77
TRIM4-205ENST00000496896 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
TRIM4-205ENST00000496896 CYP4X1Q8N118 509 aa10.24□□□□□ -0.77
TRIM4-205ENST00000496896 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
TRIM4-205ENST00000496896 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
TRIM4-205ENST00000496896 SPSB2Q99619 263 aa10.22□□□□□ -0.77
TRIM4-205ENST00000496896 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
TRIM4-205ENST00000496896 HOXA2O43364 376 aa10.21□□□□□ -0.77
TRIM4-205ENST00000496896 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
TRIM4-205ENST00000496896 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
TRIM4-205ENST00000496896 Q3C1V9 767 aa10.2□□□□□ -0.78
TRIM4-205ENST00000496896 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
TRIM4-205ENST00000496896 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
TRIM4-205ENST00000496896 MS4A1P11836 297 aa10.18□□□□□ -0.78
TRIM4-205ENST00000496896 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
TRIM4-205ENST00000496896 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
TRIM4-205ENST00000496896 GJA5P36382 358 aa10.17□□□□□ -0.78
TRIM4-205ENST00000496896 SPIRE2Q8WWL2 714 aa10.17□□□□□ -0.78
TRIM4-205ENST00000496896 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
TRIM4-205ENST00000496896 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
TRIM4-205ENST00000496896 TTC24A2A3L6 582 aaPredicted RBP10.15□□□□□ -0.78
TRIM4-205ENST00000496896 MSS51Q4VC12 460 aa10.15□□□□□ -0.78
TRIM4-205ENST00000496896 LCE2CQ5TA81 110 aa10.15□□□□□ -0.78
TRIM4-205ENST00000496896 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
TRIM4-205ENST00000496896 ATP13A2Q9NQ11 1180 aa10.13□□□□□ -0.79
TRIM4-205ENST00000496896 SNRPBP14678 240 aaKnown RBP10.12□□□□□ -0.79
TRIM4-205ENST00000496896 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
TRIM4-205ENST00000496896 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
TRIM4-205ENST00000496896 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
TRIM4-205ENST00000496896 FDX1P10109 184 aa10.11□□□□□ -0.79
TRIM4-205ENST00000496896 HLA-CQ95604 372 aa10.11□□□□□ -0.79
TRIM4-205ENST00000496896 TRIM47Q96LD4 638 aa10.11□□□□□ -0.79
TRIM4-205ENST00000496896 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
TRIM4-205ENST00000496896 SENP2Q9HC62 589 aa10.11□□□□□ -0.79
TRIM4-205ENST00000496896 LOC100996750A0A140TA64 210 aa10.09□□□□□ -0.79
TRIM4-205ENST00000496896 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
TRIM4-205ENST00000496896 MMP16P51512 607 aa10.09□□□□□ -0.79
TRIM4-205ENST00000496896 KRTAP4-6Q9BYQ5 205 aa10.09□□□□□ -0.79
TRIM4-205ENST00000496896 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
TRIM4-205ENST00000496896 SMPD1P17405 629 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 RETREG3Q86VR2 466 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
TRIM4-205ENST00000496896 SPTLC1O15269 473 aa10.07□□□□□ -0.8
TRIM4-205ENST00000496896 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
TRIM4-205ENST00000496896 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
TRIM4-205ENST00000496896 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
TRIM4-205ENST00000496896 WNT7AO00755 349 aa10.06□□□□□ -0.8
TRIM4-205ENST00000496896 NDUFV2P19404 249 aa10.06□□□□□ -0.8
TRIM4-205ENST00000496896 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
TRIM4-205ENST00000496896 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
TRIM4-205ENST00000496896 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
TRIM4-205ENST00000496896 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
TRIM4-205ENST00000496896 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
TRIM4-205ENST00000496896 KIFC2Q96AC6 838 aa10.05□□□□□ -0.8
TRIM4-205ENST00000496896 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
TRIM4-205ENST00000496896 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
TRIM4-205ENST00000496896 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
TRIM4-205ENST00000496896 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
TRIM4-205ENST00000496896 SLC16A10Q8TF71 515 aa10.03□□□□□ -0.8
TRIM4-205ENST00000496896 C6orf229H3BNL8 230 aa10.02□□□□□ -0.81
TRIM4-205ENST00000496896 MTMR2Q13614 643 aa10.02□□□□□ -0.81
TRIM4-205ENST00000496896 JUNDP17535 347 aa10.01□□□□□ -0.81
TRIM4-205ENST00000496896 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
TRIM4-205ENST00000496896 SYMPKQ92797 1274 aaKnown RBP10.01□□□□□ -0.81
TRIM4-205ENST00000496896 J3QL48 77 aa10□□□□□ -0.81
TRIM4-205ENST00000496896 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
TRIM4-205ENST00000496896 TRIM32Q13049 653 aa9.99□□□□□ -0.81
TRIM4-205ENST00000496896 ZSCAN1Q8NBB4 408 aa9.99□□□□□ -0.81
TRIM4-205ENST00000496896 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
TRIM4-205ENST00000496896 FAM117AQ9C073 453 aa9.99□□□□□ -0.81
TRIM4-205ENST00000496896 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
TRIM4-205ENST00000496896 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
TRIM4-205ENST00000496896 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms