RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-219ENST00000495955 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
GAPVD1-219ENST00000495955 LRPPRCP42704 1394 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-219ENST00000495955 MAP3K4Q9Y6R4 1608 aa12.31□□□□□ -0.44
GAPVD1-219ENST00000495955 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 CALD1Q05682 793 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 CROCC2H7BZ55 1655 aa12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-219ENST00000495955 YTHDC2Q9H6S0 1430 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 PRDM15P57071 1507 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 MTHFSP49914 203 aa12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
GAPVD1-219ENST00000495955 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
GAPVD1-219ENST00000495955 HMOX1P09601 288 aa12.28□□□□□ -0.44
GAPVD1-219ENST00000495955 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
GAPVD1-219ENST00000495955 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-219ENST00000495955 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-219ENST00000495955 ACEP12821 1306 aa12.27□□□□□ -0.44
GAPVD1-219ENST00000495955 EIF2AK4Q9P2K8 1649 aaKnown RBP12.27□□□□□ -0.44
GAPVD1-219ENST00000495955 INO80Q9ULG1 1556 aaPredicted RBP12.27□□□□□ -0.44
GAPVD1-219ENST00000495955 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
GAPVD1-219ENST00000495955 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.45
GAPVD1-219ENST00000495955 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
GAPVD1-219ENST00000495955 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
GAPVD1-219ENST00000495955 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
GAPVD1-219ENST00000495955 NME9Q86XW9 330 aa12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 FTSJ3Q8IY81 847 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 TET3O43151 1660 aa12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 TRPM2O94759 1503 aa12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 FKBP8Q14318 412 aa12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 SMG6Q86US8 1419 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-219ENST00000495955 KCNH5Q8NCM2 988 aa12.25□□□□□ -0.45
GAPVD1-219ENST00000495955 KDM5CP41229 1560 aa12.25□□□□□ -0.45
GAPVD1-219ENST00000495955 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
GAPVD1-219ENST00000495955 ARHGAP31Q2M1Z3 1444 aa12.25□□□□□ -0.45
GAPVD1-219ENST00000495955 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
GAPVD1-219ENST00000495955 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 CLTCQ00610 1675 aaKnown RBP12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 MYH16Q9H6N6 1097 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 TEFQ10587 303 aa12.24□□□□□ -0.45
GAPVD1-219ENST00000495955 IQGAP3Q86VI3 1631 aa12.23□□□□□ -0.45
GAPVD1-219ENST00000495955 PPIP5K1Q6PFW1 1433 aa12.23□□□□□ -0.45
GAPVD1-219ENST00000495955 PTPRTO14522 1441 aa12.23□□□□□ -0.45
GAPVD1-219ENST00000495955 NGLY1Q96IV0 654 aa12.22□□□□□ -0.45
GAPVD1-219ENST00000495955 CEP152O94986 1710 aa12.21□□□□□ -0.45
GAPVD1-219ENST00000495955 UNC13BO14795 1591 aa12.21□□□□□ -0.45
GAPVD1-219ENST00000495955 AGLP35573 1532 aa12.21□□□□□ -0.45
GAPVD1-219ENST00000495955 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-219ENST00000495955 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.46
GAPVD1-219ENST00000495955 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
GAPVD1-219ENST00000495955 ZMYM4Q5VZL5 1548 aa12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 PTPRMP28827 1452 aa12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 METP08581 1390 aa12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 ZNF335Q9H4Z2 1342 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-219ENST00000495955 APAF1O14727 1248 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 RIPK4P57078 832 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 ORAI2Q96SN7 254 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 KIF1BO60333 1816 aa12.19□□□□□ -0.46
GAPVD1-219ENST00000495955 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 CAMSAP1Q5T5Y3 1602 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 RIMS1Q86UR5 1692 aaKnown RBP12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 SULT6B1Q6IMI4 303 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-219ENST00000495955 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
GAPVD1-219ENST00000495955 PLA2R1Q13018 1463 aa12.17□□□□□ -0.46
GAPVD1-219ENST00000495955 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
GAPVD1-219ENST00000495955 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 PLEKHH1Q9ULM0 1364 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-219ENST00000495955 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 MSH5O43196 834 aa12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
GAPVD1-219ENST00000495955 CLTCL1P53675 1640 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms