RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 TLL1O43897 1013 aa6.13□□□□□ -1.43
LRIF1-203ENST00000494675 FAM161AQ3B820 660 aa6.13□□□□□ -1.43
LRIF1-203ENST00000494675 GDF11O95390 407 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 GPIHBP1Q8IV16 184 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 PXYLP1Q8TE99 480 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 AVPP01185 164 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 FOXC1Q12948 553 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 SLC16A10Q8TF71 515 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 PKD2L1Q9P0L9 805 aa6.11□□□□□ -1.43
LRIF1-203ENST00000494675 AXIN1O15169 862 aa6.1□□□□□ -1.43
LRIF1-203ENST00000494675 GNPATO15228 680 aa6.1□□□□□ -1.43
LRIF1-203ENST00000494675 ADH1BP00325 375 aa6.1□□□□□ -1.43
LRIF1-203ENST00000494675 IGHA1P01876 353 aa6.09□□□□□ -1.43
LRIF1-203ENST00000494675 SLC10A3P09131 477 aa6.09□□□□□ -1.43
LRIF1-203ENST00000494675 CTC1Q2NKJ3 1217 aa6.09□□□□□ -1.43
LRIF1-203ENST00000494675 SLC6A16Q9GZN6 736 aa6.09□□□□□ -1.43
LRIF1-203ENST00000494675 RDH13Q8NBN7 331 aa6.09□□□□□ -1.44
LRIF1-203ENST00000494675 DAXXQ9UER7 740 aaPredicted RBP6.09□□□□□ -1.44
LRIF1-203ENST00000494675 PLA2G2CQ5R387 149 aa6.08□□□□□ -1.44
LRIF1-203ENST00000494675 ZC3H15Q8WU90 426 aaKnown RBP6.08□□□□□ -1.44
LRIF1-203ENST00000494675 GPR37O15354 613 aa6.07□□□□□ -1.44
LRIF1-203ENST00000494675 SMCPP49901 116 aaPredicted RBP6.07□□□□□ -1.44
LRIF1-203ENST00000494675 RASSF7Q02833 373 aa6.07□□□□□ -1.44
LRIF1-203ENST00000494675 METTL3Q86U44 580 aaKnown RBP6.07□□□□□ -1.44
LRIF1-203ENST00000494675 TOR4AQ9NXH8 423 aa6.07□□□□□ -1.44
LRIF1-203ENST00000494675 SNRPBP14678 240 aaKnown RBP6.06□□□□□ -1.44
LRIF1-203ENST00000494675 CYP4X1Q8N118 509 aa6.06□□□□□ -1.44
LRIF1-203ENST00000494675 DDX11L8A8MPP1 907 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 FECHP22830 423 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 RPIAP49247 311 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 SULF1Q8IWU6 871 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 SCUBE3Q8IX30 993 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 SPSB2Q99619 263 aa6.05□□□□□ -1.44
LRIF1-203ENST00000494675 CD2BP2O95400 341 aaKnown RBP6.04□□□□□ -1.44
LRIF1-203ENST00000494675 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
LRIF1-203ENST00000494675 ATP6V1AP38606 617 aa6.03□□□□□ -1.44
LRIF1-203ENST00000494675 GRIPAP1Q4V328 841 aa6.03□□□□□ -1.44
LRIF1-203ENST00000494675 IRF7Q92985 503 aa6.03□□□□□ -1.44
LRIF1-203ENST00000494675 FMNL1O95466 1100 aaPredicted RBP6.03□□□□□ -1.44
LRIF1-203ENST00000494675 ZMYND10O75800 440 aa6.02□□□□□ -1.45
LRIF1-203ENST00000494675 GCGRP47871 477 aa6.01□□□□□ -1.45
LRIF1-203ENST00000494675 MORN1Q5T089 497 aa6.01□□□□□ -1.45
LRIF1-203ENST00000494675 TRIM47Q96LD4 638 aa6.01□□□□□ -1.45
LRIF1-203ENST00000494675 MINK1Q8N4C8 1332 aaPredicted RBP6.01□□□□□ -1.45
LRIF1-203ENST00000494675 TTC24A2A3L6 582 aaPredicted RBP6.01□□□□□ -1.45
LRIF1-203ENST00000494675 MAP2K5Q13163 448 aa6.01□□□□□ -1.45
LRIF1-203ENST00000494675 SENP2Q9HC62 589 aa6.01□□□□□ -1.45
LRIF1-203ENST00000494675 GPAT2Q6NUI2 795 aa6□□□□□ -1.45
LRIF1-203ENST00000494675 SLC24A3Q9HC58 644 aa6□□□□□ -1.45
LRIF1-203ENST00000494675 ATP13A2Q9NQ11 1180 aa6□□□□□ -1.45
LRIF1-203ENST00000494675 IRF6O14896 467 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 ADAM23O75077 832 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 FUT2Q10981 343 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 KRI1Q8N9T8 703 aaKnown RBP5.99□□□□□ -1.45
LRIF1-203ENST00000494675 Q3C1V9 767 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 BARGINQ6ZT62 677 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 NLRP7Q8WX94 980 aa5.99□□□□□ -1.45
LRIF1-203ENST00000494675 SALL2Q9Y467 1007 aaPredicted RBP5.99□□□□□ -1.45
LRIF1-203ENST00000494675 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
LRIF1-203ENST00000494675 NPAS3Q8IXF0 933 aa5.97□□□□□ -1.45
LRIF1-203ENST00000494675 KIFC2Q96AC6 838 aa5.97□□□□□ -1.45
LRIF1-203ENST00000494675 SLC27A5Q9Y2P5 690 aa5.97□□□□□ -1.45
LRIF1-203ENST00000494675 BRICD5Q6PL45 260 aa5.97□□□□□ -1.45
LRIF1-203ENST00000494675 RNF225M0QZC1 329 aaPredicted RBP5.96□□□□□ -1.46
LRIF1-203ENST00000494675 Q8N3U1 123 aa5.96□□□□□ -1.46
LRIF1-203ENST00000494675 THAP11Q96EK4 314 aa5.96□□□□□ -1.46
LRIF1-203ENST00000494675 NXF1Q9UBU9 619 aaKnown RBP5.96□□□□□ -1.46
LRIF1-203ENST00000494675 FCF1Q9Y324 198 aaKnown RBP5.96□□□□□ -1.46
LRIF1-203ENST00000494675 SMPD1P17405 629 aa5.95□□□□□ -1.46
LRIF1-203ENST00000494675 FAM160A2Q8N612 972 aaPredicted RBP5.95□□□□□ -1.46
LRIF1-203ENST00000494675 SNIP1Q8TAD8 396 aaKnown RBP5.95□□□□□ -1.46
LRIF1-203ENST00000494675 CCDC102AQ96A19 550 aa5.95□□□□□ -1.46
LRIF1-203ENST00000494675 PHOX2BQ99453 314 aa5.95□□□□□ -1.46
LRIF1-203ENST00000494675 DNMT3AQ9Y6K1 912 aaPredicted RBP5.95□□□□□ -1.46
LRIF1-203ENST00000494675 MSS51Q4VC12 460 aa5.95□□□□□ -1.46
LRIF1-203ENST00000494675 AK7Q96M32 723 aa5.95□□□□□ -1.46
LRIF1-203ENST00000494675 USP46P62068 366 aa5.94□□□□□ -1.46
LRIF1-203ENST00000494675 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
LRIF1-203ENST00000494675 WNT7AO00755 349 aa5.93□□□□□ -1.46
LRIF1-203ENST00000494675 FOXK2Q01167 660 aa5.93□□□□□ -1.46
LRIF1-203ENST00000494675 NEUROD2Q15784 382 aa5.93□□□□□ -1.46
LRIF1-203ENST00000494675 KDM4AO75164 1064 aa5.93□□□□□ -1.46
LRIF1-203ENST00000494675 CD46P15529 392 aa5.93□□□□□ -1.46
LRIF1-203ENST00000494675 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
LRIF1-203ENST00000494675 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
LRIF1-203ENST00000494675 CLCN1P35523 988 aa5.91□□□□□ -1.46
LRIF1-203ENST00000494675 RNF19BQ6ZMZ0 732 aa5.91□□□□□ -1.46
LRIF1-203ENST00000494675 PRDM9Q9NQV7 894 aa5.91□□□□□ -1.46
LRIF1-203ENST00000494675 H3BM21 787 aa5.9□□□□□ -1.46
LRIF1-203ENST00000494675 J3QL48 77 aa5.9□□□□□ -1.46
LRIF1-203ENST00000494675 NUTM1Q86Y26 1132 aa5.9□□□□□ -1.46
LRIF1-203ENST00000494675 USB1Q9BQ65 265 aaKnown RBP5.9□□□□□ -1.46
LRIF1-203ENST00000494675 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 GPCPD1Q9NPB8 672 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 TRIM66O15016 1216 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 MMP16P51512 607 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 CCDC24Q8N4L8 307 aa5.89□□□□□ -1.47
LRIF1-203ENST00000494675 HPS1Q92902 700 aa5.88□□□□□ -1.47
LRIF1-203ENST00000494675 MRGPRX2Q96LB1 330 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms