RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
NCL-210ENST00000494618 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
NCL-210ENST00000494618 SPTLC1O15269 473 aa11.82□□□□□ -0.52
NCL-210ENST00000494618 USB1Q9BQ65 265 aaKnown RBP11.82□□□□□ -0.52
NCL-210ENST00000494618 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
NCL-210ENST00000494618 S1PR4O95977 384 aa11.8□□□□□ -0.52
NCL-210ENST00000494618 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
NCL-210ENST00000494618 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
NCL-210ENST00000494618 MTMR2Q13614 643 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
NCL-210ENST00000494618 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
NCL-210ENST00000494618 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
NCL-210ENST00000494618 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
NCL-210ENST00000494618 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
NCL-210ENST00000494618 FAM160A2Q8N612 972 aaPredicted RBP11.78□□□□□ -0.52
NCL-210ENST00000494618 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
NCL-210ENST00000494618 RGS20O76081 388 aa11.77□□□□□ -0.53
NCL-210ENST00000494618 PRPF38BQ5VTL8 546 aaKnown RBP11.77□□□□□ -0.53
NCL-210ENST00000494618 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
NCL-210ENST00000494618 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
NCL-210ENST00000494618 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
NCL-210ENST00000494618 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
NCL-210ENST00000494618 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
NCL-210ENST00000494618 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
NCL-210ENST00000494618 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
NCL-210ENST00000494618 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
NCL-210ENST00000494618 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
NCL-210ENST00000494618 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
NCL-210ENST00000494618 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
NCL-210ENST00000494618 HRCP23327 699 aa11.73□□□□□ -0.53
NCL-210ENST00000494618 MMP16P51512 607 aa11.72□□□□□ -0.53
NCL-210ENST00000494618 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
NCL-210ENST00000494618 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
NCL-210ENST00000494618 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
NCL-210ENST00000494618 PCMTD1Q96MG8 357 aaPredicted RBP11.71□□□□□ -0.53
NCL-210ENST00000494618 JUNDP17535 347 aa11.7□□□□□ -0.54
NCL-210ENST00000494618 LILRB3O75022 631 aa11.69□□□□□ -0.54
NCL-210ENST00000494618 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
NCL-210ENST00000494618 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
NCL-210ENST00000494618 QPCTQ16769 361 aa11.68□□□□□ -0.54
NCL-210ENST00000494618 DESI1Q6ICB0 168 aa11.68□□□□□ -0.54
NCL-210ENST00000494618 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
NCL-210ENST00000494618 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
NCL-210ENST00000494618 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
NCL-210ENST00000494618 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
NCL-210ENST00000494618 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
NCL-210ENST00000494618 TSC1Q92574 1164 aa11.65□□□□□ -0.54
NCL-210ENST00000494618 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
NCL-210ENST00000494618 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
NCL-210ENST00000494618 CFAP99D6REC4 459 aa11.63□□□□□ -0.55
NCL-210ENST00000494618 SLC19A1P41440 591 aa11.63□□□□□ -0.55
NCL-210ENST00000494618 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
NCL-210ENST00000494618 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
NCL-210ENST00000494618 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
NCL-210ENST00000494618 PTPRNQ16849 979 aa11.62□□□□□ -0.55
NCL-210ENST00000494618 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
NCL-210ENST00000494618 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
NCL-210ENST00000494618 CCNYL3P0C7X3 344 aa11.59□□□□□ -0.55
NCL-210ENST00000494618 RPIAP49247 311 aa11.59□□□□□ -0.55
NCL-210ENST00000494618 PLA2G2CQ5R387 149 aa11.59□□□□□ -0.55
NCL-210ENST00000494618 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
NCL-210ENST00000494618 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
NCL-210ENST00000494618 EVA1BQ9NVM1 165 aa11.57□□□□□ -0.56
NCL-210ENST00000494618 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
NCL-210ENST00000494618 RFC5P40937 340 aa11.55□□□□□ -0.56
NCL-210ENST00000494618 EMID1Q96A84 441 aaPredicted RBP11.55□□□□□ -0.56
NCL-210ENST00000494618 CTHP32929 405 aa11.54□□□□□ -0.56
NCL-210ENST00000494618 KCNH2Q12809 1159 aa11.54□□□□□ -0.56
NCL-210ENST00000494618 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
NCL-210ENST00000494618 AP1G2O75843 785 aa11.53□□□□□ -0.56
NCL-210ENST00000494618 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
NCL-210ENST00000494618 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
NCL-210ENST00000494618 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
NCL-210ENST00000494618 FBXO31Q5XUX0 539 aaPredicted RBP11.52□□□□□ -0.57
NCL-210ENST00000494618 TRIM32Q13049 653 aa11.51□□□□□ -0.57
NCL-210ENST00000494618 ZNF697Q5TEC3 545 aa11.51□□□□□ -0.57
NCL-210ENST00000494618 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
NCL-210ENST00000494618 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
NCL-210ENST00000494618 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
NCL-210ENST00000494618 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
NCL-210ENST00000494618 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
NCL-210ENST00000494618 WNT7BP56706 349 aa11.46□□□□□ -0.57
NCL-210ENST00000494618 ARMC2Q8NEN0 867 aa11.46□□□□□ -0.57
NCL-210ENST00000494618 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
NCL-210ENST00000494618 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
NCL-210ENST00000494618 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
NCL-210ENST00000494618 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
NCL-210ENST00000494618 FOXC1Q12948 553 aa11.43□□□□□ -0.58
NCL-210ENST00000494618 LAPTM4AQ15012 233 aa11.43□□□□□ -0.58
NCL-210ENST00000494618 BAP1Q92560 729 aa11.43□□□□□ -0.58
NCL-210ENST00000494618 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
NCL-210ENST00000494618 GFRA3O60609 400 aa11.41□□□□□ -0.58
NCL-210ENST00000494618 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
NCL-210ENST00000494618 WNT7AO00755 349 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 GDF9O60383 454 aa11.4□□□□□ -0.58
NCL-210ENST00000494618 PRR20EP86478 221 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms