RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
BRD9-211ENST00000494422 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
BRD9-211ENST00000494422 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
BRD9-211ENST00000494422 PRKAR2AP13861 404 aaKnown RBP9.11□□□□□ -0.95
BRD9-211ENST00000494422 ABCC11Q96J66 1382 aa9.11□□□□□ -0.95
BRD9-211ENST00000494422 CHD2O14647 1828 aaKnown RBP9.1□□□□□ -0.95
BRD9-211ENST00000494422 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
BRD9-211ENST00000494422 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
BRD9-211ENST00000494422 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
BRD9-211ENST00000494422 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
BRD9-211ENST00000494422 TECPR2O15040 1411 aa9.1□□□□□ -0.95
BRD9-211ENST00000494422 PTCH1Q13635 1447 aa9.1□□□□□ -0.95
BRD9-211ENST00000494422 SETD1AO15047 1707 aaKnown RBP9.1□□□□□ -0.95
BRD9-211ENST00000494422 LRPPRCP42704 1394 aaKnown RBP9.1□□□□□ -0.95
BRD9-211ENST00000494422 DLC1Q96QB1 1528 aa9.09□□□□□ -0.95
BRD9-211ENST00000494422 GPRASP1Q5JY77 1395 aa9.09□□□□□ -0.95
BRD9-211ENST00000494422 RALGAPBQ86X10 1494 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 FAM135BQ49AJ0 1406 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
BRD9-211ENST00000494422 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 METP08581 1390 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 EIF3AQ14152 1382 aaKnown RBP9.08□□□□□ -0.96
BRD9-211ENST00000494422 TRPM1Q7Z4N2 1603 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 KNDC1Q76NI1 1749 aa9.08□□□□□ -0.96
BRD9-211ENST00000494422 XRN1Q8IZH2 1706 aaKnown RBP9.08□□□□□ -0.96
BRD9-211ENST00000494422 ADGRB1O14514 1584 aa9.07□□□□□ -0.96
BRD9-211ENST00000494422 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
BRD9-211ENST00000494422 ZNF335Q9H4Z2 1342 aaPredicted RBP9.06□□□□□ -0.96
BRD9-211ENST00000494422 LTBP4Q8N2S1 1624 aa9.06□□□□□ -0.96
BRD9-211ENST00000494422 PLCB2Q00722 1185 aa9.06□□□□□ -0.96
BRD9-211ENST00000494422 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
BRD9-211ENST00000494422 PTPRUQ92729 1446 aa9.05□□□□□ -0.96
BRD9-211ENST00000494422 PROSER2Q86WR7 435 aaPredicted RBP9.05□□□□□ -0.96
BRD9-211ENST00000494422 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
BRD9-211ENST00000494422 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
BRD9-211ENST00000494422 DCCP43146 1447 aa9.05□□□□□ -0.96
BRD9-211ENST00000494422 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
BRD9-211ENST00000494422 CARD11Q9BXL7 1154 aa9.04□□□□□ -0.96
BRD9-211ENST00000494422 CLEC11AQ9Y240 323 aa9.04□□□□□ -0.96
BRD9-211ENST00000494422 LRRC7Q96NW7 1537 aa9.04□□□□□ -0.96
BRD9-211ENST00000494422 GABBR2O75899 941 aa9.03□□□□□ -0.96
BRD9-211ENST00000494422 TMEM132EQ6IEE7 984 aa9.03□□□□□ -0.96
BRD9-211ENST00000494422 C19orf44Q9H6X5 657 aa9.03□□□□□ -0.96
BRD9-211ENST00000494422 MSH6P52701 1360 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 STRCP1A6NGW2 1772 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 CERKQ8TCT0 537 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 POGKQ9P215 609 aa9.02□□□□□ -0.97
BRD9-211ENST00000494422 ROBO2Q9HCK4 1378 aa9.01□□□□□ -0.97
BRD9-211ENST00000494422 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
BRD9-211ENST00000494422 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
BRD9-211ENST00000494422 TRAK1Q9UPV9 953 aa9.01□□□□□ -0.97
BRD9-211ENST00000494422 ARHGEF28Q8N1W1 1705 aaKnown RBP9□□□□□ -0.97
BRD9-211ENST00000494422 ADGRB2O60241 1585 aa9□□□□□ -0.97
BRD9-211ENST00000494422 TOM1O60784 492 aa9□□□□□ -0.97
BRD9-211ENST00000494422 FKBP8Q14318 412 aa9□□□□□ -0.97
BRD9-211ENST00000494422 STK26Q9P289 416 aa9□□□□□ -0.97
BRD9-211ENST00000494422 CENPJQ9HC77 1338 aaPredicted RBP9□□□□□ -0.97
BRD9-211ENST00000494422 ATF3P18847 181 aa8.99□□□□□ -0.97
BRD9-211ENST00000494422 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
BRD9-211ENST00000494422 PUS7Q96PZ0 661 aaKnown RBP8.99□□□□□ -0.97
BRD9-211ENST00000494422 PRAM1Q96QH2 718 aa8.99□□□□□ -0.97
BRD9-211ENST00000494422 ZNF692Q9BU19 519 aaPredicted RBP8.99□□□□□ -0.97
BRD9-211ENST00000494422 CDC42BPGQ6DT37 1551 aa8.99□□□□□ -0.97
BRD9-211ENST00000494422 EIF4G2P78344 907 aaKnown RBP eCLIP8.98□□□□□ -0.974e-8■■■■■ 75.7
BRD9-211ENST00000494422 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
BRD9-211ENST00000494422 ARXQ96QS3 562 aa8.98□□□□□ -0.97
BRD9-211ENST00000494422 USP47Q96K76 1375 aa8.98□□□□□ -0.97
BRD9-211ENST00000494422 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
BRD9-211ENST00000494422 EVC2Q86UK5 1308 aa8.97□□□□□ -0.97
BRD9-211ENST00000494422 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
BRD9-211ENST00000494422 XIRP1Q702N8 1843 aaKnown RBP8.96□□□□□ -0.97
BRD9-211ENST00000494422 WAPLQ7Z5K2 1190 aa8.96□□□□□ -0.98
BRD9-211ENST00000494422 NALCNQ8IZF0 1738 aa8.96□□□□□ -0.98
BRD9-211ENST00000494422 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.96□□□□□ -0.98
BRD9-211ENST00000494422 QRICH2Q9H0J4 1663 aa8.95□□□□□ -0.98
BRD9-211ENST00000494422 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
BRD9-211ENST00000494422 LHX8Q68G74 356 aa8.95□□□□□ -0.98
BRD9-211ENST00000494422 PLEKHH1Q9ULM0 1364 aa8.95□□□□□ -0.98
BRD9-211ENST00000494422 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
BRD9-211ENST00000494422 TMF1P82094 1093 aa8.94□□□□□ -0.98
BRD9-211ENST00000494422 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
BRD9-211ENST00000494422 ATAD2Q6PL18 1390 aa8.94□□□□□ -0.98
BRD9-211ENST00000494422 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
BRD9-211ENST00000494422 NINLQ9Y2I6 1382 aa8.93□□□□□ -0.98
BRD9-211ENST00000494422 MST1RQ04912 1400 aa8.93□□□□□ -0.98
BRD9-211ENST00000494422 FMN2Q9NZ56 1722 aa8.93□□□□□ -0.98
BRD9-211ENST00000494422 C1orf167Q5SNV9 1468 aa8.92□□□□□ -0.98
BRD9-211ENST00000494422 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
BRD9-211ENST00000494422 UBAP1LF5GYI3 381 aa8.92□□□□□ -0.98
BRD9-211ENST00000494422 HAP1P54257 671 aaPredicted RBP8.92□□□□□ -0.98
BRD9-211ENST00000494422 SAFB2Q14151 953 aaKnown RBP eCLIP8.92□□□□□ -0.98
BRD9-211ENST00000494422 FBXO41Q8TF61 875 aa8.92□□□□□ -0.98
BRD9-211ENST00000494422 TESK2Q96S53 571 aa8.92□□□□□ -0.98
BRD9-211ENST00000494422 BRD4O60885 1362 aaPredicted RBP8.91□□□□□ -0.98
BRD9-211ENST00000494422 CDK19Q9BWU1 502 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms