RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 FMNL1O95466 1100 aaPredicted RBP15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 BRICD5Q6PL45 260 aa15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
HMGB3P14-201ENST00000494195 RNF19BQ6ZMZ0 732 aa15.64■□□□□ 0.09
HMGB3P14-201ENST00000494195 TLL1O43897 1013 aa15.63■□□□□ 0.09
HMGB3P14-201ENST00000494195 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
HMGB3P14-201ENST00000494195 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 PRPF38BQ5VTL8 546 aaKnown RBP15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
HMGB3P14-201ENST00000494195 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 SPSB2Q99619 263 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
HMGB3P14-201ENST00000494195 ADH1BP00325 375 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 MTMR2Q13614 643 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 IFFO2Q5TF58 517 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
HMGB3P14-201ENST00000494195 NKX2-3Q8TAU0 364 aa15.59■□□□□ 0.09
HMGB3P14-201ENST00000494195 SYMPKQ92797 1274 aaKnown RBP15.59■□□□□ 0.09
HMGB3P14-201ENST00000494195 SPDYE5A6NIY4 337 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 LILRB3O75022 631 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 HRCP23327 699 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 QPCTQ16769 361 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 RETREG3Q86VR2 466 aa15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 USB1Q9BQ65 265 aaKnown RBP15.58■□□□□ 0.08
HMGB3P14-201ENST00000494195 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2DQ5VT03 806 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
HMGB3P14-201ENST00000494195 MSS51Q4VC12 460 aa15.54■□□□□ 0.08
HMGB3P14-201ENST00000494195 FAM160A2Q8N612 972 aaPredicted RBP15.53■□□□□ 0.08
HMGB3P14-201ENST00000494195 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.08
HMGB3P14-201ENST00000494195 SLC6A16Q9GZN6 736 aa15.52■□□□□ 0.08
HMGB3P14-201ENST00000494195 PRR7Q8TB68 274 aa15.51■□□□□ 0.07
HMGB3P14-201ENST00000494195 RTL5Q5HYW3 569 aaPredicted RBP15.5■□□□□ 0.07
HMGB3P14-201ENST00000494195 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
HMGB3P14-201ENST00000494195 CFAP99D6REC4 459 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 S1PR4O95977 384 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 PRDM9Q9NQV7 894 aa15.47■□□□□ 0.07
HMGB3P14-201ENST00000494195 JUNDP17535 347 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 GGCXP38435 758 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 MMP16P51512 607 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
HMGB3P14-201ENST00000494195 DXOO77932 396 aaKnown RBP15.44■□□□□ 0.06
HMGB3P14-201ENST00000494195 RFC5P40937 340 aa15.44■□□□□ 0.06
HMGB3P14-201ENST00000494195 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
HMGB3P14-201ENST00000494195 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
HMGB3P14-201ENST00000494195 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.42■□□□□ 0.06
HMGB3P14-201ENST00000494195 A0A0G2JS52 829 aa15.41■□□□□ 0.06
HMGB3P14-201ENST00000494195 TSC1Q92574 1164 aa15.4■□□□□ 0.06
HMGB3P14-201ENST00000494195 RNF223E7ERA6 249 aa15.38■□□□□ 0.05
HMGB3P14-201ENST00000494195 TMEM259Q4ZIN3 620 aa15.38■□□□□ 0.05
HMGB3P14-201ENST00000494195 AP1G2O75843 785 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 PTPRNQ16849 979 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 LYPD8Q6UX82 237 aa15.36■□□□□ 0.05
HMGB3P14-201ENST00000494195 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
HMGB3P14-201ENST00000494195 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
HMGB3P14-201ENST00000494195 FCF1Q9Y324 198 aaKnown RBP15.34■□□□□ 0.05
HMGB3P14-201ENST00000494195 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.04
HMGB3P14-201ENST00000494195 NUDT12Q9BQG2 462 aa15.32■□□□□ 0.04
HMGB3P14-201ENST00000494195 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
HMGB3P14-201ENST00000494195 CCNYL3P0C7X3 344 aa15.31■□□□□ 0.04
HMGB3P14-201ENST00000494195 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
HMGB3P14-201ENST00000494195 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
HMGB3P14-201ENST00000494195 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
HMGB3P14-201ENST00000494195 EVA1BQ9NVM1 165 aa15.26■□□□□ 0.03
HMGB3P14-201ENST00000494195 PLA2G2CQ5R387 149 aa15.25■□□□□ 0.03
HMGB3P14-201ENST00000494195 LRRN4Q8WUT4 740 aa15.25■□□□□ 0.03
HMGB3P14-201ENST00000494195 F12P00748 615 aaPredicted RBP15.24■□□□□ 0.03
HMGB3P14-201ENST00000494195 KCNH2Q12809 1159 aa15.23■□□□□ 0.03
HMGB3P14-201ENST00000494195 CTHP32929 405 aa15.22■□□□□ 0.03
HMGB3P14-201ENST00000494195 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
HMGB3P14-201ENST00000494195 SOCS7O14512 581 aa15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 PTCRAQ6ISU1 281 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P14-201ENST00000494195 RPIAP49247 311 aa15.18■□□□□ 0.02
HMGB3P14-201ENST00000494195 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
HMGB3P14-201ENST00000494195 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
HMGB3P14-201ENST00000494195 RGS20O76081 388 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 SLC19A1P41440 591 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 LIAT1Q6ZQX7 453 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 MTMR14Q8NCE2 650 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
HMGB3P14-201ENST00000494195 MCM6Q14566 821 aa15.15■□□□□ 0.02
HMGB3P14-201ENST00000494195 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
HMGB3P14-201ENST00000494195 APBB1O00213 710 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 FLIIQ13045 1269 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 NR6A1Q15406 480 aa15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 V9GY48 417 aaPredicted RBP15.14■□□□□ 0.01
HMGB3P14-201ENST00000494195 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
HMGB3P14-201ENST00000494195 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
HMGB3P14-201ENST00000494195 TRIM32Q13049 653 aa15.12■□□□□ 0.01
HMGB3P14-201ENST00000494195 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
HMGB3P14-201ENST00000494195 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
HMGB3P14-201ENST00000494195 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
HMGB3P14-201ENST00000494195 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
HMGB3P14-201ENST00000494195 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
HMGB3P14-201ENST00000494195 PNMA1Q8ND90 353 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms