RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
MINDY4-203ENST00000494187 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
MINDY4-203ENST00000494187 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
MINDY4-203ENST00000494187 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
MINDY4-203ENST00000494187 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
MINDY4-203ENST00000494187 SMG6Q86US8 1419 aaKnown RBP11.88□□□□□ -0.51
MINDY4-203ENST00000494187 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
MINDY4-203ENST00000494187 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
MINDY4-203ENST00000494187 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
MINDY4-203ENST00000494187 YEATS2Q9ULM3 1422 aa11.87□□□□□ -0.51
MINDY4-203ENST00000494187 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
MINDY4-203ENST00000494187 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
MINDY4-203ENST00000494187 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
MINDY4-203ENST00000494187 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
MINDY4-203ENST00000494187 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
MINDY4-203ENST00000494187 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
MINDY4-203ENST00000494187 DEKP35659 375 aaKnown RBP11.85□□□□□ -0.51
MINDY4-203ENST00000494187 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
MINDY4-203ENST00000494187 NLRP6P59044 892 aa11.85□□□□□ -0.51
MINDY4-203ENST00000494187 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
MINDY4-203ENST00000494187 BCORL1Q5H9F3 1711 aa11.85□□□□□ -0.51
MINDY4-203ENST00000494187 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
MINDY4-203ENST00000494187 NUDT16Q96DE0 195 aaKnown RBP11.84□□□□□ -0.51
MINDY4-203ENST00000494187 PARD3Q8TEW0 1356 aa11.84□□□□□ -0.51
MINDY4-203ENST00000494187 AEBP2Q6ZN18 517 aaPredicted RBP11.84□□□□□ -0.51
MINDY4-203ENST00000494187 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
MINDY4-203ENST00000494187 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
MINDY4-203ENST00000494187 FYB1O15117 783 aa11.83□□□□□ -0.52
MINDY4-203ENST00000494187 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
MINDY4-203ENST00000494187 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
MINDY4-203ENST00000494187 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
MINDY4-203ENST00000494187 CDC42BPBQ9Y5S2 1711 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 MCM10Q7L590 875 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
MINDY4-203ENST00000494187 ZCCHC11Q5TAX3 1644 aaKnown RBP11.81□□□□□ -0.52
MINDY4-203ENST00000494187 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
MINDY4-203ENST00000494187 ATP10AO60312 1499 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
MINDY4-203ENST00000494187 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
MINDY4-203ENST00000494187 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
MINDY4-203ENST00000494187 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
MINDY4-203ENST00000494187 NPATQ14207 1427 aa11.8□□□□□ -0.52
MINDY4-203ENST00000494187 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
MINDY4-203ENST00000494187 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
MINDY4-203ENST00000494187 RTEL1-TNFRSF6BF6WH68 1400 aa11.8□□□□□ -0.52
MINDY4-203ENST00000494187 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 IGHDP01880 384 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 AEBP1Q8IUX7 1158 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 CENPQQ7L2Z9 268 aaPredicted RBP11.79□□□□□ -0.52
MINDY4-203ENST00000494187 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
MINDY4-203ENST00000494187 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 RLBP1P12271 317 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
MINDY4-203ENST00000494187 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 PSME1Q06323 249 aa11.78□□□□□ -0.52
MINDY4-203ENST00000494187 GZF1Q9H116 711 aaPredicted RBP11.77□□□□□ -0.52
MINDY4-203ENST00000494187 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.52
MINDY4-203ENST00000494187 SHROOM2Q13796 1616 aa11.77□□□□□ -0.52
MINDY4-203ENST00000494187 COL17A1Q9UMD9 1497 aaPredicted RBP11.77□□□□□ -0.53
MINDY4-203ENST00000494187 TSPOAP1O95153 1857 aa11.77□□□□□ -0.53
MINDY4-203ENST00000494187 HSP90AB2PQ58FF8 381 aa11.77□□□□□ -0.53
MINDY4-203ENST00000494187 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
MINDY4-203ENST00000494187 KDM5CP41229 1560 aa11.77□□□□□ -0.53
MINDY4-203ENST00000494187 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
MINDY4-203ENST00000494187 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
MINDY4-203ENST00000494187 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
MINDY4-203ENST00000494187 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
MINDY4-203ENST00000494187 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
MINDY4-203ENST00000494187 WASLO00401 505 aaPredicted RBP11.76□□□□□ -0.53
MINDY4-203ENST00000494187 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
MINDY4-203ENST00000494187 FOXO3O43524 673 aa11.75□□□□□ -0.53
MINDY4-203ENST00000494187 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
MINDY4-203ENST00000494187 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
MINDY4-203ENST00000494187 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
MINDY4-203ENST00000494187 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
MINDY4-203ENST00000494187 A0A1W2PP64 1363 aa11.74□□□□□ -0.53
MINDY4-203ENST00000494187 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
MINDY4-203ENST00000494187 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.74□□□□□ -0.53
MINDY4-203ENST00000494187 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
MINDY4-203ENST00000494187 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
MINDY4-203ENST00000494187 ABCC1P33527 1531 aa11.73□□□□□ -0.53
MINDY4-203ENST00000494187 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
MINDY4-203ENST00000494187 ZC3H6P61129 1189 aaKnown RBP11.73□□□□□ -0.53
MINDY4-203ENST00000494187 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
MINDY4-203ENST00000494187 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
MINDY4-203ENST00000494187 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
MINDY4-203ENST00000494187 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
MINDY4-203ENST00000494187 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
MINDY4-203ENST00000494187 PRDM15P57071 1507 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms