RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
MACF1-222ENST00000494012 TIMELESSQ9UNS1 1208 aa14.31□□□□□ -0.12
MACF1-222ENST00000494012 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
MACF1-222ENST00000494012 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
MACF1-222ENST00000494012 ADGRB2O60241 1585 aa14.3□□□□□ -0.12
MACF1-222ENST00000494012 RALGAPBQ86X10 1494 aa14.29□□□□□ -0.12
MACF1-222ENST00000494012 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
MACF1-222ENST00000494012 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
MACF1-222ENST00000494012 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.12
MACF1-222ENST00000494012 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
MACF1-222ENST00000494012 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
MACF1-222ENST00000494012 PRAM1Q96QH2 718 aa14.27□□□□□ -0.13
MACF1-222ENST00000494012 POGKQ9P215 609 aa14.27□□□□□ -0.13
MACF1-222ENST00000494012 SLAIN2Q9P270 581 aa14.27□□□□□ -0.13
MACF1-222ENST00000494012 MST1RQ04912 1400 aa14.26□□□□□ -0.13
MACF1-222ENST00000494012 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
MACF1-222ENST00000494012 QRICH2Q9H0J4 1663 aa14.26□□□□□ -0.13
MACF1-222ENST00000494012 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
MACF1-222ENST00000494012 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
MACF1-222ENST00000494012 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
MACF1-222ENST00000494012 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
MACF1-222ENST00000494012 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
MACF1-222ENST00000494012 C1orf167Q5SNV9 1468 aa14.22□□□□□ -0.13
MACF1-222ENST00000494012 KIF1AQ12756 1690 aa14.22□□□□□ -0.13
MACF1-222ENST00000494012 NHSL1Q5SYE7 1610 aa14.22□□□□□ -0.13
MACF1-222ENST00000494012 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
MACF1-222ENST00000494012 ITSN1Q15811 1721 aa14.21□□□□□ -0.14
MACF1-222ENST00000494012 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
MACF1-222ENST00000494012 RGPD8O14715 1765 aaPredicted RBP14.2□□□□□ -0.14
MACF1-222ENST00000494012 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
MACF1-222ENST00000494012 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
MACF1-222ENST00000494012 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
MACF1-222ENST00000494012 TULP4Q9NRJ4 1543 aa14.19□□□□□ -0.14
MACF1-222ENST00000494012 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
MACF1-222ENST00000494012 HSPA1LP34931 641 aa14.18□□□□□ -0.14
MACF1-222ENST00000494012 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
MACF1-222ENST00000494012 COL16A1Q07092 1604 aaPredicted RBP14.18□□□□□ -0.14
MACF1-222ENST00000494012 HIRIP3Q9BW71 556 aaPredicted RBP14.17□□□□□ -0.14
MACF1-222ENST00000494012 TOPAZ1Q8N9V7 1692 aa14.15□□□□□ -0.14
MACF1-222ENST00000494012 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
MACF1-222ENST00000494012 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
MACF1-222ENST00000494012 ESCO1Q5FWF5 840 aa14.14□□□□□ -0.15
MACF1-222ENST00000494012 ATP7BP35670 1465 aa14.13□□□□□ -0.15
MACF1-222ENST00000494012 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
MACF1-222ENST00000494012 ORAI2Q96SN7 254 aa14.13□□□□□ -0.15
MACF1-222ENST00000494012 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
MACF1-222ENST00000494012 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
MACF1-222ENST00000494012 USP47Q96K76 1375 aa14.11□□□□□ -0.15
MACF1-222ENST00000494012 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
MACF1-222ENST00000494012 MED1Q15648 1581 aaPredicted RBP14.1□□□□□ -0.15
MACF1-222ENST00000494012 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
MACF1-222ENST00000494012 CDK19Q9BWU1 502 aa14.1□□□□□ -0.15
MACF1-222ENST00000494012 JCADQ9P266 1359 aa14.09□□□□□ -0.15
MACF1-222ENST00000494012 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
MACF1-222ENST00000494012 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
MACF1-222ENST00000494012 PXDNQ92626 1479 aa14.09□□□□□ -0.15
MACF1-222ENST00000494012 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
MACF1-222ENST00000494012 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
MACF1-222ENST00000494012 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
MACF1-222ENST00000494012 FOXO3O43524 673 aa14.07□□□□□ -0.16
MACF1-222ENST00000494012 LRRC59Q96AG4 307 aaKnown RBP14.07□□□□□ -0.16
MACF1-222ENST00000494012 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
MACF1-222ENST00000494012 COL22A1Q8NFW1 1626 aaPredicted RBP14.06□□□□□ -0.16
MACF1-222ENST00000494012 ST20-MTHFSA0A0A6YYL1 179 aa14.06□□□□□ -0.16
MACF1-222ENST00000494012 DDX17Q92841 729 aaKnown RBP14.06□□□□□ -0.16
MACF1-222ENST00000494012 PPIP5K1Q6PFW1 1433 aa14.06□□□□□ -0.16
MACF1-222ENST00000494012 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
MACF1-222ENST00000494012 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
MACF1-222ENST00000494012 ATAD2Q6PL18 1390 aa14.05□□□□□ -0.16
MACF1-222ENST00000494012 PSME1Q06323 249 aa14.04□□□□□ -0.16
MACF1-222ENST00000494012 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
MACF1-222ENST00000494012 PMFBP1Q8TBY8 1022 aa14.04□□□□□ -0.16
MACF1-222ENST00000494012 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
MACF1-222ENST00000494012 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
MACF1-222ENST00000494012 AKAP12Q02952 1782 aa14.02□□□□□ -0.16
MACF1-222ENST00000494012 ALS2Q96Q42 1657 aa14.02□□□□□ -0.16
MACF1-222ENST00000494012 TNS3Q68CZ2 1445 aa14.02□□□□□ -0.16
MACF1-222ENST00000494012 SBNO1A3KN83 1393 aa14.02□□□□□ -0.17
MACF1-222ENST00000494012 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.17
MACF1-222ENST00000494012 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
MACF1-222ENST00000494012 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.17
MACF1-222ENST00000494012 TESK2Q96S53 571 aa14.02□□□□□ -0.17
MACF1-222ENST00000494012 PLEKHG3A1L390 1219 aa14.01□□□□□ -0.17
MACF1-222ENST00000494012 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
MACF1-222ENST00000494012 PUS7Q96PZ0 661 aaKnown RBP14.01□□□□□ -0.17
MACF1-222ENST00000494012 ARHGEF10O15013 1369 aa14□□□□□ -0.17
MACF1-222ENST00000494012 SPATA31A3Q5VYP0 1347 aa14□□□□□ -0.17
MACF1-222ENST00000494012 TMF1P82094 1093 aa14□□□□□ -0.17
MACF1-222ENST00000494012 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
MACF1-222ENST00000494012 MON2Q7Z3U7 1717 aa13.99□□□□□ -0.17
MACF1-222ENST00000494012 ABCA3Q99758 1704 aa13.99□□□□□ -0.17
MACF1-222ENST00000494012 ACEP12821 1306 aa13.99□□□□□ -0.17
MACF1-222ENST00000494012 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
MACF1-222ENST00000494012 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
MACF1-222ENST00000494012 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
MACF1-222ENST00000494012 CABP1Q9NZU7 370 aa13.98□□□□□ -0.17
MACF1-222ENST00000494012 LRP6O75581 1613 aa13.97□□□□□ -0.17
MACF1-222ENST00000494012 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
MACF1-222ENST00000494012 USP6P35125 1406 aa13.97□□□□□ -0.17
MACF1-222ENST00000494012 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms