RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PHC3-212ENST00000490723 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
PHC3-212ENST00000490723 PPEF1O14829 653 aaPredicted RBP9.68□□□□□ -0.86
PHC3-212ENST00000490723 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
PHC3-212ENST00000490723 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
PHC3-212ENST00000490723 FAM160A2Q8N612 972 aaPredicted RBP9.68□□□□□ -0.86
PHC3-212ENST00000490723 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
PHC3-212ENST00000490723 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
PHC3-212ENST00000490723 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
PHC3-212ENST00000490723 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
PHC3-212ENST00000490723 PCDHB15Q9Y5E8 787 aa9.67□□□□□ -0.86
PHC3-212ENST00000490723 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
PHC3-212ENST00000490723 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
PHC3-212ENST00000490723 SPTLC1O15269 473 aa9.66□□□□□ -0.86
PHC3-212ENST00000490723 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
PHC3-212ENST00000490723 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
PHC3-212ENST00000490723 ATP1B4Q9UN42 357 aaPredicted RBP9.66□□□□□ -0.86
PHC3-212ENST00000490723 GJA5P36382 358 aa9.63□□□□□ -0.87
PHC3-212ENST00000490723 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
PHC3-212ENST00000490723 MTMR2Q13614 643 aa9.63□□□□□ -0.87
PHC3-212ENST00000490723 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
PHC3-212ENST00000490723 RETREG3Q86VR2 466 aa9.63□□□□□ -0.87
PHC3-212ENST00000490723 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
PHC3-212ENST00000490723 ANKLE1Q8NAG6 615 aa9.61□□□□□ -0.87
PHC3-212ENST00000490723 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
PHC3-212ENST00000490723 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 HRCP23327 699 aa9.6□□□□□ -0.87
PHC3-212ENST00000490723 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
PHC3-212ENST00000490723 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
PHC3-212ENST00000490723 QPCTQ16769 361 aa9.59□□□□□ -0.87
PHC3-212ENST00000490723 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
PHC3-212ENST00000490723 PRKD2Q9BZL6 878 aa9.59□□□□□ -0.87
PHC3-212ENST00000490723 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
PHC3-212ENST00000490723 RGS20O76081 388 aa9.58□□□□□ -0.88
PHC3-212ENST00000490723 MMP16P51512 607 aa9.58□□□□□ -0.88
PHC3-212ENST00000490723 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
PHC3-212ENST00000490723 PROCA1Q8NCQ7 364 aaPredicted RBP9.58□□□□□ -0.88
PHC3-212ENST00000490723 DXOO77932 396 aaKnown RBP9.57□□□□□ -0.88
PHC3-212ENST00000490723 JUNDP17535 347 aa9.57□□□□□ -0.88
PHC3-212ENST00000490723 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
PHC3-212ENST00000490723 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
PHC3-212ENST00000490723 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
PHC3-212ENST00000490723 TSC1Q92574 1164 aa9.57□□□□□ -0.88
PHC3-212ENST00000490723 LILRB3O75022 631 aa9.56□□□□□ -0.88
PHC3-212ENST00000490723 CFAP99D6REC4 459 aa9.55□□□□□ -0.88
PHC3-212ENST00000490723 SLC19A1P41440 591 aa9.55□□□□□ -0.88
PHC3-212ENST00000490723 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
PHC3-212ENST00000490723 LIAT1Q6ZQX7 453 aa9.54□□□□□ -0.88
PHC3-212ENST00000490723 EMID1Q96A84 441 aaPredicted RBP9.54□□□□□ -0.88
PHC3-212ENST00000490723 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
PHC3-212ENST00000490723 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
PHC3-212ENST00000490723 NUDT12Q9BQG2 462 aa9.52□□□□□ -0.89
PHC3-212ENST00000490723 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
PHC3-212ENST00000490723 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
PHC3-212ENST00000490723 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
PHC3-212ENST00000490723 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
PHC3-212ENST00000490723 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
PHC3-212ENST00000490723 CCNYL3P0C7X3 344 aa9.49□□□□□ -0.89
PHC3-212ENST00000490723 PTPRNQ16849 979 aa9.49□□□□□ -0.89
PHC3-212ENST00000490723 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
PHC3-212ENST00000490723 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
PHC3-212ENST00000490723 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
PHC3-212ENST00000490723 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
PHC3-212ENST00000490723 RPIAP49247 311 aa9.47□□□□□ -0.89
PHC3-212ENST00000490723 PTCRAQ6ISU1 281 aaPredicted RBP9.47□□□□□ -0.89
PHC3-212ENST00000490723 CD2BP2O95400 341 aaKnown RBP9.46□□□□□ -0.9
PHC3-212ENST00000490723 CTHP32929 405 aa9.46□□□□□ -0.9
PHC3-212ENST00000490723 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
PHC3-212ENST00000490723 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
PHC3-212ENST00000490723 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.9
PHC3-212ENST00000490723 EVA1BQ9NVM1 165 aa9.46□□□□□ -0.9
PHC3-212ENST00000490723 AP1G2O75843 785 aa9.45□□□□□ -0.9
PHC3-212ENST00000490723 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
PHC3-212ENST00000490723 TRIM32Q13049 653 aa9.45□□□□□ -0.9
PHC3-212ENST00000490723 RFC5P40937 340 aa9.44□□□□□ -0.9
PHC3-212ENST00000490723 KCNH2Q12809 1159 aa9.44□□□□□ -0.9
PHC3-212ENST00000490723 MAP10Q9P2G4 905 aa9.44□□□□□ -0.9
PHC3-212ENST00000490723 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
PHC3-212ENST00000490723 FOXC1Q12948 553 aa9.42□□□□□ -0.9
PHC3-212ENST00000490723 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
PHC3-212ENST00000490723 LRRN4Q8WUT4 740 aa9.41□□□□□ -0.9
PHC3-212ENST00000490723 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
PHC3-212ENST00000490723 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
PHC3-212ENST00000490723 TNFRSF10AO00220 468 aa9.39□□□□□ -0.91
PHC3-212ENST00000490723 GFRA3O60609 400 aa9.39□□□□□ -0.91
PHC3-212ENST00000490723 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
PHC3-212ENST00000490723 BAP1Q92560 729 aa9.39□□□□□ -0.91
PHC3-212ENST00000490723 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
PHC3-212ENST00000490723 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
PHC3-212ENST00000490723 SKOR1P84550 965 aa9.37□□□□□ -0.91
PHC3-212ENST00000490723 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
PHC3-212ENST00000490723 GDF9O60383 454 aa9.36□□□□□ -0.91
PHC3-212ENST00000490723 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
PHC3-212ENST00000490723 WNT7BP56706 349 aa9.35□□□□□ -0.91
PHC3-212ENST00000490723 SH3BP2P78314 561 aa9.35□□□□□ -0.91
PHC3-212ENST00000490723 NR6A1Q15406 480 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms