RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 KDM4AO75164 1064 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 QPCTQ16769 361 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 ADGRD1Q6QNK2 874 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 HMGXB3Q12766 1538 aa8.94□□□□□ -0.98
SSX2IP-208ENST00000490476 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
SSX2IP-208ENST00000490476 PPP2R2DQ66LE6 453 aa8.93□□□□□ -0.98
SSX2IP-208ENST00000490476 BANK1Q8NDB2 785 aa8.93□□□□□ -0.98
SSX2IP-208ENST00000490476 CHD1O14646 1710 aa8.93□□□□□ -0.98
SSX2IP-208ENST00000490476 RSF1Q96T23 1441 aaPredicted RBP8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 AP1G2O75843 785 aa8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 HDGFP51858 240 aaKnown RBP8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 CCDC82Q8N4S0 544 aa8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 CABLES1Q8TDN4 633 aa8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
SSX2IP-208ENST00000490476 KIF13AQ9H1H9 1805 aa8.91□□□□□ -0.98
SSX2IP-208ENST00000490476 GCGRP47871 477 aa8.91□□□□□ -0.98
SSX2IP-208ENST00000490476 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
SSX2IP-208ENST00000490476 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
SSX2IP-208ENST00000490476 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
SSX2IP-208ENST00000490476 SYNJ2O15056 1496 aa8.9□□□□□ -0.98
SSX2IP-208ENST00000490476 SLC10A3P09131 477 aa8.9□□□□□ -0.98
SSX2IP-208ENST00000490476 TUSC1Q2TAM9 212 aa8.9□□□□□ -0.98
SSX2IP-208ENST00000490476 HRO43593 1189 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 LILRB3O75022 631 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 RNF40O75150 1001 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 FDX1P10109 184 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 HLA-CQ95604 372 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 GDPD2Q9HCC8 539 aa8.89□□□□□ -0.99
SSX2IP-208ENST00000490476 HOXA2O43364 376 aa8.88□□□□□ -0.99
SSX2IP-208ENST00000490476 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
SSX2IP-208ENST00000490476 USP46P62068 366 aa8.88□□□□□ -0.99
SSX2IP-208ENST00000490476 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
SSX2IP-208ENST00000490476 MTMR14Q8NCE2 650 aa8.88□□□□□ -0.99
SSX2IP-208ENST00000490476 HRCP23327 699 aa8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 GJA5P36382 358 aa8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 TSC1Q92574 1164 aa8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 ZNF330Q9Y3S2 320 aaPredicted RBP8.87□□□□□ -0.99
SSX2IP-208ENST00000490476 ABL2P42684 1182 aa8.86□□□□□ -0.99
SSX2IP-208ENST00000490476 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
SSX2IP-208ENST00000490476 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
SSX2IP-208ENST00000490476 USP17L8P0C7I0 530 aa8.85□□□□□ -0.99
SSX2IP-208ENST00000490476 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
SSX2IP-208ENST00000490476 PCDHGC3Q9UN70 934 aa8.85□□□□□ -0.99
SSX2IP-208ENST00000490476 VPS9D1Q9Y2B5 631 aa8.85□□□□□ -0.99
SSX2IP-208ENST00000490476 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
SSX2IP-208ENST00000490476 CCDC97Q96F63 343 aaPredicted RBP8.84□□□□□ -0.99
SSX2IP-208ENST00000490476 PRM3Q9NNZ6 103 aa8.84□□□□□ -0.99
SSX2IP-208ENST00000490476 ATAD2BQ9ULI0 1458 aa8.83□□□□□ -1
SSX2IP-208ENST00000490476 CFHP08603 1231 aa8.83□□□□□ -1
SSX2IP-208ENST00000490476 WWC1Q8IX03 1113 aa8.83□□□□□ -1
SSX2IP-208ENST00000490476 SLF2Q8IX21 1173 aa8.83□□□□□ -1
SSX2IP-208ENST00000490476 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
SSX2IP-208ENST00000490476 C6orf229H3BNL8 230 aa8.82□□□□□ -1
SSX2IP-208ENST00000490476 FUT2Q10981 343 aa8.82□□□□□ -1
SSX2IP-208ENST00000490476 NBPF3Q9H094 633 aa8.82□□□□□ -1
SSX2IP-208ENST00000490476 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
SSX2IP-208ENST00000490476 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
SSX2IP-208ENST00000490476 STAC3Q96MF2 364 aa8.81□□□□□ -1
SSX2IP-208ENST00000490476 ADGRL1O94910 1474 aa8.81□□□□□ -1
SSX2IP-208ENST00000490476 MTMR2Q13614 643 aa8.8□□□□□ -1
SSX2IP-208ENST00000490476 SERPINA10Q9UK55 444 aa8.8□□□□□ -1
SSX2IP-208ENST00000490476 KDM6BO15054 1643 aa8.8□□□□□ -1
SSX2IP-208ENST00000490476 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
SSX2IP-208ENST00000490476 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
SSX2IP-208ENST00000490476 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
SSX2IP-208ENST00000490476 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
SSX2IP-208ENST00000490476 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
SSX2IP-208ENST00000490476 CEP164Q9UPV0 1460 aa8.77□□□□□ -1
SSX2IP-208ENST00000490476 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 BHMG1C9JSJ3 638 aaPredicted RBP8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 LRRN4Q8WUT4 740 aa8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 HMX1Q9NP08 348 aaPredicted RBP8.77□□□□□ -1.01
SSX2IP-208ENST00000490476 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
SSX2IP-208ENST00000490476 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
SSX2IP-208ENST00000490476 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
SSX2IP-208ENST00000490476 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
SSX2IP-208ENST00000490476 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
SSX2IP-208ENST00000490476 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
SSX2IP-208ENST00000490476 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
SSX2IP-208ENST00000490476 PRR7Q8TB68 274 aa8.74□□□□□ -1.01
SSX2IP-208ENST00000490476 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
SSX2IP-208ENST00000490476 DCAF1Q9Y4B6 1507 aa8.74□□□□□ -1.01
SSX2IP-208ENST00000490476 PDIA4P13667 645 aaKnown RBP8.73□□□□□ -1.01
SSX2IP-208ENST00000490476 GLMNQ92990 594 aa8.73□□□□□ -1.01
SSX2IP-208ENST00000490476 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 GOLGA8CPA6NN73 597 aa8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 TRIM34Q9BYJ4 488 aa8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SSX2IP-208ENST00000490476 ZNF608Q9ULD9 1512 aaPredicted RBP8.71□□□□□ -1.01
SSX2IP-208ENST00000490476 EIF4G3O43432 1585 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms