RNA–Protein interactions for RNA: ENST00000489850.5

NOM1-208, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-208ENST00000489850 PLEKHH1Q9ULM0 1364 aa29.41■■■□□ 2.3
NOM1-208ENST00000489850 PRAM1Q96QH2 718 aa29.41■■■□□ 2.3
NOM1-208ENST00000489850 POGKQ9P215 609 aa29.41■■■□□ 2.3
NOM1-208ENST00000489850 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
NOM1-208ENST00000489850 NBPF1Q3BBV0 1214 aa29.35■■■□□ 2.29
NOM1-208ENST00000489850 C1orf167Q5SNV9 1468 aa29.35■■■□□ 2.29
NOM1-208ENST00000489850 BRINP3Q76B58 766 aa29.34■■■□□ 2.29
NOM1-208ENST00000489850 SAFB2Q14151 953 aaKnown RBP eCLIP29.32■■■□□ 2.28
NOM1-208ENST00000489850 TRPM1Q7Z4N2 1603 aa29.31■■■□□ 2.28
NOM1-208ENST00000489850 ROCK2O75116 1388 aaKnown RBP29.3■■■□□ 2.28
NOM1-208ENST00000489850 CCER1Q8TC90 406 aaPredicted RBP29.3■■■□□ 2.28
NOM1-208ENST00000489850 ARHGEF28Q8N1W1 1705 aaKnown RBP29.29■■■□□ 2.28
NOM1-208ENST00000489850 TIMELESSQ9UNS1 1208 aa29.29■■■□□ 2.28
NOM1-208ENST00000489850 AHDC1Q5TGY3 1603 aaPredicted RBP29.29■■■□□ 2.28
NOM1-208ENST00000489850 ADGRB2O60241 1585 aa29.28■■■□□ 2.28
NOM1-208ENST00000489850 PHLPP1O60346 1717 aa29.26■■■□□ 2.27
NOM1-208ENST00000489850 NBPF8Q3BBV2 869 aa29.25■■■□□ 2.27
NOM1-208ENST00000489850 FMN2Q9NZ56 1722 aa29.25■■■□□ 2.27
NOM1-208ENST00000489850 EIF3AQ14152 1382 aaKnown RBP29.25■■■□□ 2.27
NOM1-208ENST00000489850 MINK1Q8N4C8 1332 aaPredicted RBP29.22■■■□□ 2.27
NOM1-208ENST00000489850 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
NOM1-208ENST00000489850 GPRASP1Q5JY77 1395 aa29.22■■■□□ 2.27
NOM1-208ENST00000489850 ORAI2Q96SN7 254 aa29.21■■■□□ 2.27
NOM1-208ENST00000489850 RALGAPBQ86X10 1494 aa29.21■■■□□ 2.27
NOM1-208ENST00000489850 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.27
NOM1-208ENST00000489850 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.26
NOM1-208ENST00000489850 ANKARQ7Z5J8 1434 aa29.2■■■□□ 2.26
NOM1-208ENST00000489850 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.26
NOM1-208ENST00000489850 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
NOM1-208ENST00000489850 NUTM2FA1L443 756 aa29.18■■■□□ 2.26
NOM1-208ENST00000489850 WASLO00401 505 aaPredicted RBP29.18■■■□□ 2.26
NOM1-208ENST00000489850 JCADQ9P266 1359 aa29.17■■■□□ 2.26
NOM1-208ENST00000489850 NPHP3Q7Z494 1330 aa29.16■■■□□ 2.26
NOM1-208ENST00000489850 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
NOM1-208ENST00000489850 TULP4Q9NRJ4 1543 aa29.14■■■□□ 2.25
NOM1-208ENST00000489850 LRRC59Q96AG4 307 aaKnown RBP29.13■■■□□ 2.25
NOM1-208ENST00000489850 KIF1AQ12756 1690 aa29.12■■■□□ 2.25
NOM1-208ENST00000489850 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
NOM1-208ENST00000489850 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
NOM1-208ENST00000489850 PHF8Q9UPP1 1060 aa29.1■■■□□ 2.25
NOM1-208ENST00000489850 QRICH2Q9H0J4 1663 aa29.09■■■□□ 2.25
NOM1-208ENST00000489850 FOXO3O43524 673 aa29.08■■■□□ 2.25
NOM1-208ENST00000489850 CDK19Q9BWU1 502 aa29.07■■■□□ 2.24
NOM1-208ENST00000489850 USP32Q8NFA0 1604 aa29.06■■■□□ 2.24
NOM1-208ENST00000489850 SPATA31A6Q5VVP1 1343 aa29.06■■■□□ 2.24
NOM1-208ENST00000489850 SHPRHQ149N8 1683 aa29.05■■■□□ 2.24
NOM1-208ENST00000489850 MED1Q15648 1581 aaPredicted RBP29.05■■■□□ 2.24
NOM1-208ENST00000489850 RGPD8O14715 1765 aaPredicted RBP29.04■■■□□ 2.24
NOM1-208ENST00000489850 PXDNQ92626 1479 aa29.04■■■□□ 2.24
NOM1-208ENST00000489850 PRR36Q9H6K5 1346 aa29.03■■■□□ 2.24
NOM1-208ENST00000489850 NUDT16Q96DE0 195 aaKnown RBP29.03■■■□□ 2.24
NOM1-208ENST00000489850 ATP7BP35670 1465 aa29.03■■■□□ 2.24
NOM1-208ENST00000489850 EVC2Q86UK5 1308 aa29.02■■■□□ 2.24
NOM1-208ENST00000489850 SBNO2Q9Y2G9 1366 aa29.01■■■□□ 2.24
NOM1-208ENST00000489850 SRPK2P78362 688 aaKnown RBP29.01■■■□□ 2.23
NOM1-208ENST00000489850 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.23
NOM1-208ENST00000489850 ITSN1Q15811 1721 aa29■■■□□ 2.23
NOM1-208ENST00000489850 PSME1Q06323 249 aa29■■■□□ 2.23
NOM1-208ENST00000489850 CCDC61Q9Y6R9 512 aa28.99■■■□□ 2.23
NOM1-208ENST00000489850 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
NOM1-208ENST00000489850 PMFBP1Q8TBY8 1022 aa28.98■■■□□ 2.23
NOM1-208ENST00000489850 KRT28Q7Z3Y7 464 aa28.97■■■□□ 2.23
NOM1-208ENST00000489850 XPCQ01831 940 aaPredicted RBP28.96■■■□□ 2.23
NOM1-208ENST00000489850 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
NOM1-208ENST00000489850 NGDNQ8NEJ9 315 aaKnown RBP28.95■■■□□ 2.22
NOM1-208ENST00000489850 PHF23Q9BUL5 403 aaPredicted RBP28.94■■■□□ 2.22
NOM1-208ENST00000489850 CABP2Q9NPB3 220 aa28.94■■■□□ 2.22
NOM1-208ENST00000489850 SBNO1A3KN83 1393 aa28.93■■■□□ 2.22
NOM1-208ENST00000489850 TOPAZ1Q8N9V7 1692 aa28.93■■■□□ 2.22
NOM1-208ENST00000489850 PLEKHG3A1L390 1219 aa28.91■■■□□ 2.22
NOM1-208ENST00000489850 SPATA31A3Q5VYP0 1347 aa28.91■■■□□ 2.22
NOM1-208ENST00000489850 POLR3AO14802 1390 aaPredicted RBP28.89■■■□□ 2.22
NOM1-208ENST00000489850 USP47Q96K76 1375 aa28.89■■■□□ 2.22
NOM1-208ENST00000489850 TNS3Q68CZ2 1445 aa28.89■■■□□ 2.22
NOM1-208ENST00000489850 PPIP5K1Q6PFW1 1433 aa28.88■■■□□ 2.21
NOM1-208ENST00000489850 COL22A1Q8NFW1 1626 aaPredicted RBP28.88■■■□□ 2.21
NOM1-208ENST00000489850 MEX3CQ5U5Q3 659 aaKnown RBP28.88■■■□□ 2.21
NOM1-208ENST00000489850 ATAD2Q6PL18 1390 aa28.88■■■□□ 2.21
NOM1-208ENST00000489850 ST20-MTHFSA0A0A6YYL1 179 aa28.87■■■□□ 2.21
NOM1-208ENST00000489850 NUTM2BA6NNL0 878 aaPredicted RBP28.87■■■□□ 2.21
NOM1-208ENST00000489850 NUTM2EB1AL46 878 aaPredicted RBP28.87■■■□□ 2.21
NOM1-208ENST00000489850 NUTM2AQ8IVF1 878 aaPredicted RBP28.87■■■□□ 2.21
NOM1-208ENST00000489850 ARHGEF10O15013 1369 aa28.87■■■□□ 2.21
NOM1-208ENST00000489850 LRP6O75581 1613 aa28.87■■■□□ 2.21
NOM1-208ENST00000489850 ACEP12821 1306 aa28.85■■■□□ 2.21
NOM1-208ENST00000489850 PUS7Q96PZ0 661 aaKnown RBP28.83■■■□□ 2.21
NOM1-208ENST00000489850 TESK2Q96S53 571 aa28.82■■■□□ 2.2
NOM1-208ENST00000489850 TRPM3Q9HCF6 1732 aaPredicted RBP28.81■■■□□ 2.2
NOM1-208ENST00000489850 CABP1Q9NZU7 370 aa28.81■■■□□ 2.2
NOM1-208ENST00000489850 LMOD2Q6P5Q4 547 aa28.8■■■□□ 2.2
NOM1-208ENST00000489850 BRD4O60885 1362 aaPredicted RBP28.79■■■□□ 2.2
NOM1-208ENST00000489850 PAK3O75914 559 aaPredicted RBP28.78■■■□□ 2.2
NOM1-208ENST00000489850 TMF1P82094 1093 aa28.75■■■□□ 2.19
NOM1-208ENST00000489850 ALS2Q96Q42 1657 aa28.74■■■□□ 2.19
NOM1-208ENST00000489850 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
NOM1-208ENST00000489850 ZNF692Q9BU19 519 aaPredicted RBP28.74■■■□□ 2.19
NOM1-208ENST00000489850 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
NOM1-208ENST00000489850 CDCA8Q53HL2 280 aa28.72■■■□□ 2.19
NOM1-208ENST00000489850 ZNF772Q68DY9 489 aaPredicted RBP28.72■■■□□ 2.19
NOM1-208ENST00000489850 C8orf37Q96NL8 207 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms