RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
ABCB1-207ENST00000488737 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
ABCB1-207ENST00000488737 E9PSI1 815 aa18.62■□□□□ 0.57
ABCB1-207ENST00000488737 APAF1O14727 1248 aa18.62■□□□□ 0.57
ABCB1-207ENST00000488737 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
ABCB1-207ENST00000488737 PREX1Q8TCU6 1659 aa18.6■□□□□ 0.57
ABCB1-207ENST00000488737 TULP4Q9NRJ4 1543 aa18.6■□□□□ 0.57
ABCB1-207ENST00000488737 NSD2O96028 1365 aa18.6■□□□□ 0.57
ABCB1-207ENST00000488737 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
ABCB1-207ENST00000488737 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
ABCB1-207ENST00000488737 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
ABCB1-207ENST00000488737 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
ABCB1-207ENST00000488737 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
ABCB1-207ENST00000488737 PDE4AP27815 886 aa18.58■□□□□ 0.57
ABCB1-207ENST00000488737 BACH2Q9BYV9 841 aa18.58■□□□□ 0.57
ABCB1-207ENST00000488737 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.56
ABCB1-207ENST00000488737 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
ABCB1-207ENST00000488737 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.56
ABCB1-207ENST00000488737 CENPQQ7L2Z9 268 aaPredicted RBP18.57■□□□□ 0.56
ABCB1-207ENST00000488737 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
ABCB1-207ENST00000488737 ANKRD36BQ8N2N9 1353 aa18.57■□□□□ 0.56
ABCB1-207ENST00000488737 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
ABCB1-207ENST00000488737 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
ABCB1-207ENST00000488737 IQSEC2Q5JU85 1478 aa18.56■□□□□ 0.56
ABCB1-207ENST00000488737 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
ABCB1-207ENST00000488737 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
ABCB1-207ENST00000488737 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
ABCB1-207ENST00000488737 CLTCQ00610 1675 aaKnown RBP18.53■□□□□ 0.56
ABCB1-207ENST00000488737 IDI1Q13907 227 aa18.53■□□□□ 0.56
ABCB1-207ENST00000488737 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
ABCB1-207ENST00000488737 ZBTB47Q9UFB7 747 aaPredicted RBP18.53■□□□□ 0.56
ABCB1-207ENST00000488737 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.55
ABCB1-207ENST00000488737 WWC1Q8IX03 1113 aa18.52■□□□□ 0.55
ABCB1-207ENST00000488737 CFAP53Q96M91 514 aa18.51■□□□□ 0.55
ABCB1-207ENST00000488737 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
ABCB1-207ENST00000488737 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
ABCB1-207ENST00000488737 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
ABCB1-207ENST00000488737 ARHGEF40Q8TER5 1519 aa18.49■□□□□ 0.55
ABCB1-207ENST00000488737 PTPRMP28827 1452 aa18.49■□□□□ 0.55
ABCB1-207ENST00000488737 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
ABCB1-207ENST00000488737 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
ABCB1-207ENST00000488737 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
ABCB1-207ENST00000488737 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
ABCB1-207ENST00000488737 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
ABCB1-207ENST00000488737 MTHFSP49914 203 aa18.47■□□□□ 0.55
ABCB1-207ENST00000488737 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
ABCB1-207ENST00000488737 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
ABCB1-207ENST00000488737 MED14O60244 1454 aa18.46■□□□□ 0.55
ABCB1-207ENST00000488737 BCAR3O75815 825 aa18.46■□□□□ 0.54
ABCB1-207ENST00000488737 NUTM2DQ5VT03 806 aaPredicted RBP18.46■□□□□ 0.54
ABCB1-207ENST00000488737 AGLP35573 1532 aa18.45■□□□□ 0.54
ABCB1-207ENST00000488737 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
ABCB1-207ENST00000488737 TCP11L2Q8N4U5 519 aa18.44■□□□□ 0.54
ABCB1-207ENST00000488737 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
ABCB1-207ENST00000488737 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
ABCB1-207ENST00000488737 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
ABCB1-207ENST00000488737 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
ABCB1-207ENST00000488737 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
ABCB1-207ENST00000488737 AAMPQ13685 434 aa18.42■□□□□ 0.54
ABCB1-207ENST00000488737 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
ABCB1-207ENST00000488737 DDRGK1Q96HY6 314 aa18.41■□□□□ 0.54
ABCB1-207ENST00000488737 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
ABCB1-207ENST00000488737 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.54
ABCB1-207ENST00000488737 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.54
ABCB1-207ENST00000488737 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.53
ABCB1-207ENST00000488737 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
ABCB1-207ENST00000488737 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
ABCB1-207ENST00000488737 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.53
ABCB1-207ENST00000488737 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
ABCB1-207ENST00000488737 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
ABCB1-207ENST00000488737 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
ABCB1-207ENST00000488737 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
ABCB1-207ENST00000488737 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
ABCB1-207ENST00000488737 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
ABCB1-207ENST00000488737 STK26Q9P289 416 aa18.37■□□□□ 0.53
ABCB1-207ENST00000488737 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
ABCB1-207ENST00000488737 CANXP27824 592 aaKnown RBP18.36■□□□□ 0.53
ABCB1-207ENST00000488737 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
ABCB1-207ENST00000488737 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
ABCB1-207ENST00000488737 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
ABCB1-207ENST00000488737 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
ABCB1-207ENST00000488737 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
ABCB1-207ENST00000488737 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
ABCB1-207ENST00000488737 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
ABCB1-207ENST00000488737 POGKQ9P215 609 aa18.35■□□□□ 0.53
ABCB1-207ENST00000488737 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
ABCB1-207ENST00000488737 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
ABCB1-207ENST00000488737 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.53
ABCB1-207ENST00000488737 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.53
ABCB1-207ENST00000488737 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.52
ABCB1-207ENST00000488737 CDC42BPGQ6DT37 1551 aa18.32■□□□□ 0.52
ABCB1-207ENST00000488737 NBR1Q14596 966 aa18.32■□□□□ 0.52
ABCB1-207ENST00000488737 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
ABCB1-207ENST00000488737 FYB1O15117 783 aa18.31■□□□□ 0.52
ABCB1-207ENST00000488737 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
ABCB1-207ENST00000488737 ATP7BP35670 1465 aa18.31■□□□□ 0.52
ABCB1-207ENST00000488737 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
ABCB1-207ENST00000488737 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
ABCB1-207ENST00000488737 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
ABCB1-207ENST00000488737 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms