RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 PCDHGC3Q9UN70 934 aa5.57□□□□□ -1.52
EPB41-211ENST00000488277 C6orf229H3BNL8 230 aa5.56□□□□□ -1.52
EPB41-211ENST00000488277 GJA5P36382 358 aa5.56□□□□□ -1.52
EPB41-211ENST00000488277 BRICD5Q6PL45 260 aa5.56□□□□□ -1.52
EPB41-211ENST00000488277 SYMPKQ92797 1274 aaKnown RBP5.56□□□□□ -1.52
EPB41-211ENST00000488277 THAP11Q96EK4 314 aa5.56□□□□□ -1.52
EPB41-211ENST00000488277 LIMD1Q9UGP4 676 aa5.56□□□□□ -1.52
EPB41-211ENST00000488277 SALL2Q9Y467 1007 aaPredicted RBP5.56□□□□□ -1.52
EPB41-211ENST00000488277 SKIV2LQ15477 1246 aaKnown RBP5.55□□□□□ -1.52
EPB41-211ENST00000488277 SLC6A16Q9GZN6 736 aa5.55□□□□□ -1.52
EPB41-211ENST00000488277 PCDHB15Q9Y5E8 787 aa5.55□□□□□ -1.52
EPB41-211ENST00000488277 A0A0G2JS52 829 aa5.54□□□□□ -1.52
EPB41-211ENST00000488277 S1PR4O95977 384 aa5.54□□□□□ -1.52
EPB41-211ENST00000488277 MTMR2Q13614 643 aa5.54□□□□□ -1.52
EPB41-211ENST00000488277 USB1Q9BQ65 265 aaKnown RBP5.54□□□□□ -1.52
EPB41-211ENST00000488277 ZBTB3Q9H5J0 574 aa5.54□□□□□ -1.52
EPB41-211ENST00000488277 HRCP23327 699 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 GGCXP38435 758 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 TUSC1Q2TAM9 212 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 MSS51Q4VC12 460 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 PRPF38BQ5VTL8 546 aaKnown RBP5.53□□□□□ -1.52
EPB41-211ENST00000488277 PPP1R18Q6NYC8 613 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 RETREG3Q86VR2 466 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
EPB41-211ENST00000488277 PROCA1Q8NCQ7 364 aaPredicted RBP5.53□□□□□ -1.52
EPB41-211ENST00000488277 CABLES1Q8TDN4 633 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 PCMTD1Q96MG8 357 aaPredicted RBP5.53□□□□□ -1.52
EPB41-211ENST00000488277 PRDM9Q9NQV7 894 aa5.53□□□□□ -1.52
EPB41-211ENST00000488277 SPDYE5A6NIY4 337 aa5.52□□□□□ -1.53
EPB41-211ENST00000488277 NUTM2BA6NNL0 878 aaPredicted RBP5.52□□□□□ -1.53
EPB41-211ENST00000488277 NUTM2EB1AL46 878 aaPredicted RBP5.52□□□□□ -1.53
EPB41-211ENST00000488277 QPCTQ16769 361 aa5.52□□□□□ -1.53
EPB41-211ENST00000488277 NUTM2DQ5VT03 806 aaPredicted RBP5.52□□□□□ -1.53
EPB41-211ENST00000488277 NUTM2AQ8IVF1 878 aaPredicted RBP5.52□□□□□ -1.53
EPB41-211ENST00000488277 GOPCQ9HD26 462 aa5.52□□□□□ -1.53
EPB41-211ENST00000488277 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.52□□□□□ -1.53
EPB41-211ENST00000488277 LILRB3O75022 631 aa5.51□□□□□ -1.53
EPB41-211ENST00000488277 PRR7Q8TB68 274 aa5.51□□□□□ -1.53
EPB41-211ENST00000488277 RNF223E7ERA6 249 aa5.5□□□□□ -1.53
EPB41-211ENST00000488277 PPEF1O14829 653 aaPredicted RBP5.5□□□□□ -1.53
EPB41-211ENST00000488277 JUNDP17535 347 aa5.5□□□□□ -1.53
EPB41-211ENST00000488277 RTL5Q5HYW3 569 aaPredicted RBP5.5□□□□□ -1.53
EPB41-211ENST00000488277 TSC1Q92574 1164 aa5.5□□□□□ -1.53
EPB41-211ENST00000488277 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.5□□□□□ -1.53
EPB41-211ENST00000488277 CFAP99D6REC4 459 aa5.49□□□□□ -1.53
EPB41-211ENST00000488277 DXOO77932 396 aaKnown RBP5.49□□□□□ -1.53
EPB41-211ENST00000488277 MMP16P51512 607 aa5.49□□□□□ -1.53
EPB41-211ENST00000488277 FCF1Q9Y324 198 aaKnown RBP5.49□□□□□ -1.53
EPB41-211ENST00000488277 ANKLE1Q8NAG6 615 aa5.48□□□□□ -1.53
EPB41-211ENST00000488277 FBXO31Q5XUX0 539 aaPredicted RBP5.47□□□□□ -1.53
EPB41-211ENST00000488277 PPP2R2DQ66LE6 453 aa5.47□□□□□ -1.53
EPB41-211ENST00000488277 DESI1Q6ICB0 168 aa5.47□□□□□ -1.53
EPB41-211ENST00000488277 CCDC24Q8N4L8 307 aa5.47□□□□□ -1.53
EPB41-211ENST00000488277 HELBQ8NG08 1087 aaPredicted RBP5.47□□□□□ -1.53
EPB41-211ENST00000488277 RFC5P40937 340 aa5.46□□□□□ -1.54
EPB41-211ENST00000488277 TMEM132AQ24JP5 1023 aa5.46□□□□□ -1.54
EPB41-211ENST00000488277 NUDT12Q9BQG2 462 aa5.46□□□□□ -1.54
EPB41-211ENST00000488277 AP1G2O75843 785 aa5.45□□□□□ -1.54
EPB41-211ENST00000488277 CCNYL3P0C7X3 344 aa5.45□□□□□ -1.54
EPB41-211ENST00000488277 PTPRNQ16849 979 aa5.45□□□□□ -1.54
EPB41-211ENST00000488277 PLA2G2CQ5R387 149 aa5.45□□□□□ -1.54
EPB41-211ENST00000488277 LYPD8Q6UX82 237 aa5.45□□□□□ -1.54
EPB41-211ENST00000488277 PER1O15534 1290 aaPredicted RBP5.44□□□□□ -1.54
EPB41-211ENST00000488277 CTDSPL2Q05D32 466 aa5.44□□□□□ -1.54
EPB41-211ENST00000488277 PRKD2Q9BZL6 878 aa5.44□□□□□ -1.54
EPB41-211ENST00000488277 ZBTB24O43167 697 aaPredicted RBP5.43□□□□□ -1.54
EPB41-211ENST00000488277 RGS20O76081 388 aa5.43□□□□□ -1.54
EPB41-211ENST00000488277 CTHP32929 405 aa5.43□□□□□ -1.54
EPB41-211ENST00000488277 SLC19A1P41440 591 aa5.43□□□□□ -1.54
EPB41-211ENST00000488277 USP17L8P0C7I0 530 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 KCNH2Q12809 1159 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 TMEM259Q4ZIN3 620 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 LIAT1Q6ZQX7 453 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 EMID1Q96A84 441 aaPredicted RBP5.42□□□□□ -1.54
EPB41-211ENST00000488277 EVA1BQ9NVM1 165 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 MAP10Q9P2G4 905 aa5.42□□□□□ -1.54
EPB41-211ENST00000488277 V9GY48 417 aaPredicted RBP5.42□□□□□ -1.54
EPB41-211ENST00000488277 F12P00748 615 aaPredicted RBP5.41□□□□□ -1.54
EPB41-211ENST00000488277 RPIAP49247 311 aa5.41□□□□□ -1.54
EPB41-211ENST00000488277 PTCRAQ6ISU1 281 aaPredicted RBP5.41□□□□□ -1.54
EPB41-211ENST00000488277 LRRN4Q8WUT4 740 aa5.41□□□□□ -1.54
EPB41-211ENST00000488277 TRIM32Q13049 653 aa5.4□□□□□ -1.54
EPB41-211ENST00000488277 UNC93B1Q9H1C4 597 aa5.4□□□□□ -1.54
EPB41-211ENST00000488277 CD2BP2O95400 341 aaKnown RBP5.39□□□□□ -1.55
EPB41-211ENST00000488277 ZNF697Q5TEC3 545 aa5.39□□□□□ -1.55
EPB41-211ENST00000488277 SPRYD7Q5W111 196 aa5.39□□□□□ -1.55
EPB41-211ENST00000488277 HMX1Q9NP08 348 aaPredicted RBP5.39□□□□□ -1.55
EPB41-211ENST00000488277 NR6A1Q15406 480 aa5.38□□□□□ -1.55
EPB41-211ENST00000488277 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
EPB41-211ENST00000488277 ZNF598Q86UK7 904 aaKnown RBP5.38□□□□□ -1.55
EPB41-211ENST00000488277 BANK1Q8NDB2 785 aa5.38□□□□□ -1.55
EPB41-211ENST00000488277 BAP1Q92560 729 aa5.37□□□□□ -1.55
EPB41-211ENST00000488277 ARMC2Q8NEN0 867 aa5.36□□□□□ -1.55
EPB41-211ENST00000488277 EPS8L1Q8TE68 723 aa5.36□□□□□ -1.55
EPB41-211ENST00000488277 SNRKQ9NRH2 765 aa5.36□□□□□ -1.55
EPB41-211ENST00000488277 WNT7BP56706 349 aa5.35□□□□□ -1.55
EPB41-211ENST00000488277 SH3BP2P78314 561 aa5.35□□□□□ -1.55
EPB41-211ENST00000488277 SKOR1P84550 965 aa5.35□□□□□ -1.55
EPB41-211ENST00000488277 FOXC1Q12948 553 aa5.35□□□□□ -1.55
EPB41-211ENST00000488277 ZNF511Q8NB15 262 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms