RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
RBM28-207ENST00000488249 SPSB2Q99619 263 aa7.05□□□□□ -1.28
RBM28-207ENST00000488249 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
RBM28-207ENST00000488249 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
RBM28-207ENST00000488249 CLK2P49760 499 aaKnown RBP7.04□□□□□ -1.28
RBM28-207ENST00000488249 TUSC1Q2TAM9 212 aa7.04□□□□□ -1.28
RBM28-207ENST00000488249 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
RBM28-207ENST00000488249 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
RBM28-207ENST00000488249 GOPCQ9HD26 462 aa7.03□□□□□ -1.28
RBM28-207ENST00000488249 C6orf229H3BNL8 230 aa7.02□□□□□ -1.29
RBM28-207ENST00000488249 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
RBM28-207ENST00000488249 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
RBM28-207ENST00000488249 USB1Q9BQ65 265 aaKnown RBP7.02□□□□□ -1.29
RBM28-207ENST00000488249 HRCP23327 699 aa7.01□□□□□ -1.29
RBM28-207ENST00000488249 MTMR2Q13614 643 aa7.01□□□□□ -1.29
RBM28-207ENST00000488249 RETREG3Q86VR2 466 aa7.01□□□□□ -1.29
RBM28-207ENST00000488249 FAM160A2Q8N612 972 aaPredicted RBP7.01□□□□□ -1.29
RBM28-207ENST00000488249 PROCA1Q8NCQ7 364 aaPredicted RBP7.01□□□□□ -1.29
RBM28-207ENST00000488249 SLC6A16Q9GZN6 736 aa7.01□□□□□ -1.29
RBM28-207ENST00000488249 ZBTB3Q9H5J0 574 aa7.01□□□□□ -1.29
RBM28-207ENST00000488249 SPDYE5A6NIY4 337 aa7□□□□□ -1.29
RBM28-207ENST00000488249 LILRB3O75022 631 aa7□□□□□ -1.29
RBM28-207ENST00000488249 QPCTQ16769 361 aa7□□□□□ -1.29
RBM28-207ENST00000488249 MSS51Q4VC12 460 aa7□□□□□ -1.29
RBM28-207ENST00000488249 PCMTD1Q96MG8 357 aaPredicted RBP7□□□□□ -1.29
RBM28-207ENST00000488249 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
RBM28-207ENST00000488249 ATP1B4Q9UN42 357 aaPredicted RBP7□□□□□ -1.29
RBM28-207ENST00000488249 A0A0G2JS52 829 aa6.99□□□□□ -1.29
RBM28-207ENST00000488249 NUTM2BA6NNL0 878 aaPredicted RBP6.99□□□□□ -1.29
RBM28-207ENST00000488249 NUTM2EB1AL46 878 aaPredicted RBP6.99□□□□□ -1.29
RBM28-207ENST00000488249 S1PR4O95977 384 aa6.99□□□□□ -1.29
RBM28-207ENST00000488249 NUTM2DQ5VT03 806 aaPredicted RBP6.99□□□□□ -1.29
RBM28-207ENST00000488249 PPP1R18Q6NYC8 613 aa6.99□□□□□ -1.29
RBM28-207ENST00000488249 NUTM2AQ8IVF1 878 aaPredicted RBP6.99□□□□□ -1.29
RBM28-207ENST00000488249 CABLES1Q8TDN4 633 aa6.99□□□□□ -1.29
RBM28-207ENST00000488249 GGCXP38435 758 aa6.98□□□□□ -1.29
RBM28-207ENST00000488249 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.98□□□□□ -1.29
RBM28-207ENST00000488249 MMP16P51512 607 aa6.97□□□□□ -1.29
RBM28-207ENST00000488249 RTL5Q5HYW3 569 aaPredicted RBP6.97□□□□□ -1.29
RBM28-207ENST00000488249 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
RBM28-207ENST00000488249 PRDM9Q9NQV7 894 aa6.97□□□□□ -1.29
RBM28-207ENST00000488249 RNF223E7ERA6 249 aa6.96□□□□□ -1.3
RBM28-207ENST00000488249 FBXO31Q5XUX0 539 aaPredicted RBP6.96□□□□□ -1.3
RBM28-207ENST00000488249 PPP2R2DQ66LE6 453 aa6.96□□□□□ -1.3
RBM28-207ENST00000488249 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
RBM28-207ENST00000488249 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
RBM28-207ENST00000488249 DXOO77932 396 aaKnown RBP6.95□□□□□ -1.3
RBM28-207ENST00000488249 JUNDP17535 347 aa6.95□□□□□ -1.3
RBM28-207ENST00000488249 TMEM132AQ24JP5 1023 aa6.95□□□□□ -1.3
RBM28-207ENST00000488249 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
RBM28-207ENST00000488249 ANKLE1Q8NAG6 615 aa6.94□□□□□ -1.3
RBM28-207ENST00000488249 FCF1Q9Y324 198 aaKnown RBP6.93□□□□□ -1.3
RBM28-207ENST00000488249 RFC5P40937 340 aa6.92□□□□□ -1.3
RBM28-207ENST00000488249 TSC1Q92574 1164 aa6.92□□□□□ -1.3
RBM28-207ENST00000488249 PTPRNQ16849 979 aa6.91□□□□□ -1.3
RBM28-207ENST00000488249 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
RBM28-207ENST00000488249 HELBQ8NG08 1087 aaPredicted RBP6.91□□□□□ -1.3
RBM28-207ENST00000488249 CCDC24Q8N4L8 307 aa6.9□□□□□ -1.3
RBM28-207ENST00000488249 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
RBM28-207ENST00000488249 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
RBM28-207ENST00000488249 AP1G2O75843 785 aa6.89□□□□□ -1.31
RBM28-207ENST00000488249 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
RBM28-207ENST00000488249 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
RBM28-207ENST00000488249 TMEM259Q4ZIN3 620 aa6.89□□□□□ -1.31
RBM28-207ENST00000488249 PLA2G2CQ5R387 149 aa6.89□□□□□ -1.31
RBM28-207ENST00000488249 RGS20O76081 388 aa6.88□□□□□ -1.31
RBM28-207ENST00000488249 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
RBM28-207ENST00000488249 LIAT1Q6ZQX7 453 aa6.87□□□□□ -1.31
RBM28-207ENST00000488249 EMID1Q96A84 441 aaPredicted RBP6.87□□□□□ -1.31
RBM28-207ENST00000488249 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
RBM28-207ENST00000488249 ZBTB24O43167 697 aaPredicted RBP6.86□□□□□ -1.31
RBM28-207ENST00000488249 SLC19A1P41440 591 aa6.86□□□□□ -1.31
RBM28-207ENST00000488249 RPIAP49247 311 aa6.86□□□□□ -1.31
RBM28-207ENST00000488249 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
RBM28-207ENST00000488249 V9GY48 417 aaPredicted RBP6.86□□□□□ -1.31
RBM28-207ENST00000488249 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
RBM28-207ENST00000488249 USP17L8P0C7I0 530 aa6.85□□□□□ -1.31
RBM28-207ENST00000488249 CTHP32929 405 aa6.85□□□□□ -1.31
RBM28-207ENST00000488249 PTCRAQ6ISU1 281 aaPredicted RBP6.85□□□□□ -1.31
RBM28-207ENST00000488249 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
RBM28-207ENST00000488249 BANK1Q8NDB2 785 aa6.84□□□□□ -1.31
RBM28-207ENST00000488249 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
RBM28-207ENST00000488249 CD2BP2O95400 341 aaKnown RBP6.83□□□□□ -1.32
RBM28-207ENST00000488249 SPRYD7Q5W111 196 aa6.83□□□□□ -1.32
RBM28-207ENST00000488249 UNC93B1Q9H1C4 597 aa6.83□□□□□ -1.32
RBM28-207ENST00000488249 TRIM32Q13049 653 aa6.82□□□□□ -1.32
RBM28-207ENST00000488249 NR6A1Q15406 480 aa6.81□□□□□ -1.32
RBM28-207ENST00000488249 ZNF598Q86UK7 904 aaKnown RBP6.81□□□□□ -1.32
RBM28-207ENST00000488249 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
RBM28-207ENST00000488249 ZNF697Q5TEC3 545 aa6.8□□□□□ -1.32
RBM28-207ENST00000488249 SNRKQ9NRH2 765 aa6.8□□□□□ -1.32
RBM28-207ENST00000488249 ARMC2Q8NEN0 867 aa6.79□□□□□ -1.32
RBM28-207ENST00000488249 EPS8L1Q8TE68 723 aa6.79□□□□□ -1.32
RBM28-207ENST00000488249 BAP1Q92560 729 aa6.79□□□□□ -1.32
RBM28-207ENST00000488249 SOCS7O14512 581 aa6.78□□□□□ -1.32
RBM28-207ENST00000488249 WNT7BP56706 349 aa6.78□□□□□ -1.32
RBM28-207ENST00000488249 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
RBM28-207ENST00000488249 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
RBM28-207ENST00000488249 GJD4Q96KN9 370 aaPredicted RBP6.78□□□□□ -1.32
RBM28-207ENST00000488249 TRIM34Q9BYJ4 488 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms