RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 SCUBE3Q8IX30 993 aa7.12□□□□□ -1.27
PCGF3-212ENST00000488032 PCDHGC3Q9UN70 934 aa7.12□□□□□ -1.27
PCGF3-212ENST00000488032 FMNL1O95466 1100 aaPredicted RBP7.11□□□□□ -1.27
PCGF3-212ENST00000488032 RANGAP1P46060 587 aaPredicted RBP7.11□□□□□ -1.27
PCGF3-212ENST00000488032 TJAP1Q5JTD0 557 aa7.11□□□□□ -1.27
PCGF3-212ENST00000488032 PROCA1Q8NCQ7 364 aaPredicted RBP7.11□□□□□ -1.27
PCGF3-212ENST00000488032 ARXQ96QS3 562 aa7.11□□□□□ -1.27
PCGF3-212ENST00000488032 PCDHB15Q9Y5E8 787 aa7.11□□□□□ -1.27
PCGF3-212ENST00000488032 C6orf229H3BNL8 230 aa7.1□□□□□ -1.27
PCGF3-212ENST00000488032 LILRB3O75022 631 aa7.1□□□□□ -1.27
PCGF3-212ENST00000488032 ZPR1O75312 459 aa7.1□□□□□ -1.27
PCGF3-212ENST00000488032 ITGBL1O95965 494 aaPredicted RBP7.1□□□□□ -1.27
PCGF3-212ENST00000488032 CSPP1Q1MSJ5 1256 aa7.1□□□□□ -1.27
PCGF3-212ENST00000488032 PPP2R2DQ66LE6 453 aa7.1□□□□□ -1.27
PCGF3-212ENST00000488032 HRCP23327 699 aa7.09□□□□□ -1.27
PCGF3-212ENST00000488032 QPCTQ16769 361 aa7.09□□□□□ -1.27
PCGF3-212ENST00000488032 BRICD5Q6PL45 260 aa7.09□□□□□ -1.27
PCGF3-212ENST00000488032 RETREG3Q86VR2 466 aa7.09□□□□□ -1.27
PCGF3-212ENST00000488032 THAP11Q96EK4 314 aa7.09□□□□□ -1.27
PCGF3-212ENST00000488032 NUTM2BA6NNL0 878 aaPredicted RBP7.08□□□□□ -1.28
PCGF3-212ENST00000488032 NUTM2EB1AL46 878 aaPredicted RBP7.08□□□□□ -1.28
PCGF3-212ENST00000488032 NUTM2DQ5VT03 806 aaPredicted RBP7.08□□□□□ -1.28
PCGF3-212ENST00000488032 RNF19BQ6ZMZ0 732 aa7.08□□□□□ -1.28
PCGF3-212ENST00000488032 NUTM2AQ8IVF1 878 aaPredicted RBP7.08□□□□□ -1.28
PCGF3-212ENST00000488032 CABLES1Q8TDN4 633 aa7.08□□□□□ -1.28
PCGF3-212ENST00000488032 SPSB2Q99619 263 aa7.08□□□□□ -1.28
PCGF3-212ENST00000488032 ADH1BP00325 375 aa7.07□□□□□ -1.28
PCGF3-212ENST00000488032 KCNC4Q03721 635 aa7.07□□□□□ -1.28
PCGF3-212ENST00000488032 MSS51Q4VC12 460 aa7.07□□□□□ -1.28
PCGF3-212ENST00000488032 USB1Q9BQ65 265 aaKnown RBP7.07□□□□□ -1.28
PCGF3-212ENST00000488032 TLL1O43897 1013 aa7.06□□□□□ -1.28
PCGF3-212ENST00000488032 RFC5P40937 340 aa7.06□□□□□ -1.28
PCGF3-212ENST00000488032 TMEM259Q4ZIN3 620 aa7.05□□□□□ -1.28
PCGF3-212ENST00000488032 RTL5Q5HYW3 569 aaPredicted RBP7.05□□□□□ -1.28
PCGF3-212ENST00000488032 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
PCGF3-212ENST00000488032 HELBQ8NG08 1087 aaPredicted RBP7.05□□□□□ -1.28
PCGF3-212ENST00000488032 PRR7Q8TB68 274 aa7.05□□□□□ -1.28
PCGF3-212ENST00000488032 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
PCGF3-212ENST00000488032 SYMPKQ92797 1274 aaKnown RBP7.05□□□□□ -1.28
PCGF3-212ENST00000488032 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
PCGF3-212ENST00000488032 IFFO2Q5TF58 517 aa7.03□□□□□ -1.28
PCGF3-212ENST00000488032 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
PCGF3-212ENST00000488032 JUNDP17535 347 aa7.02□□□□□ -1.29
PCGF3-212ENST00000488032 FAM160A2Q8N612 972 aaPredicted RBP7.02□□□□□ -1.29
PCGF3-212ENST00000488032 BANK1Q8NDB2 785 aa7.02□□□□□ -1.29
PCGF3-212ENST00000488032 SLC6A16Q9GZN6 736 aa7.02□□□□□ -1.29
PCGF3-212ENST00000488032 GTF3C3Q9Y5Q9 886 aa7.02□□□□□ -1.29
PCGF3-212ENST00000488032 DXOO77932 396 aaKnown RBP7.01□□□□□ -1.29
PCGF3-212ENST00000488032 MMP16P51512 607 aa7.01□□□□□ -1.29
PCGF3-212ENST00000488032 TSC1Q92574 1164 aa7.01□□□□□ -1.29
PCGF3-212ENST00000488032 SOCS7O14512 581 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 EIF5BO60841 1220 aaKnown RBP7□□□□□ -1.29
PCGF3-212ENST00000488032 AP1G2O75843 785 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 GGCXP38435 758 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 PTPRNQ16849 979 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 PRDM9Q9NQV7 894 aa7□□□□□ -1.29
PCGF3-212ENST00000488032 S1PR4O95977 384 aa6.99□□□□□ -1.29
PCGF3-212ENST00000488032 USP17L8P0C7I0 530 aa6.99□□□□□ -1.29
PCGF3-212ENST00000488032 FLIIQ13045 1269 aa6.99□□□□□ -1.29
PCGF3-212ENST00000488032 PLSCR2Q9NRY7 297 aa6.99□□□□□ -1.29
PCGF3-212ENST00000488032 PLA2G2EQ9NZK7 142 aa6.99□□□□□ -1.29
PCGF3-212ENST00000488032 APBB1O00213 710 aa6.98□□□□□ -1.29
PCGF3-212ENST00000488032 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
PCGF3-212ENST00000488032 CCNYL3P0C7X3 344 aa6.97□□□□□ -1.29
PCGF3-212ENST00000488032 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
PCGF3-212ENST00000488032 MCM6Q14566 821 aa6.96□□□□□ -1.3
PCGF3-212ENST00000488032 NUDT12Q9BQG2 462 aa6.96□□□□□ -1.3
PCGF3-212ENST00000488032 PER1O15534 1290 aaPredicted RBP6.95□□□□□ -1.3
PCGF3-212ENST00000488032 PPP1R18Q6NYC8 613 aa6.95□□□□□ -1.3
PCGF3-212ENST00000488032 ANKLE1Q8NAG6 615 aa6.95□□□□□ -1.3
PCGF3-212ENST00000488032 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.95□□□□□ -1.3
PCGF3-212ENST00000488032 RNF223E7ERA6 249 aa6.94□□□□□ -1.3
PCGF3-212ENST00000488032 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
PCGF3-212ENST00000488032 MTMR14Q8NCE2 650 aa6.94□□□□□ -1.3
PCGF3-212ENST00000488032 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
PCGF3-212ENST00000488032 FCF1Q9Y324 198 aaKnown RBP6.94□□□□□ -1.3
PCGF3-212ENST00000488032 A0A0G2JS52 829 aa6.93□□□□□ -1.3
PCGF3-212ENST00000488032 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
PCGF3-212ENST00000488032 EVA1BQ9NVM1 165 aa6.93□□□□□ -1.3
PCGF3-212ENST00000488032 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
PCGF3-212ENST00000488032 CCDC24Q8N4L8 307 aa6.92□□□□□ -1.3
PCGF3-212ENST00000488032 PNMA1Q8ND90 353 aa6.92□□□□□ -1.3
PCGF3-212ENST00000488032 PRM3Q9NNZ6 103 aa6.92□□□□□ -1.3
PCGF3-212ENST00000488032 CTHP32929 405 aa6.91□□□□□ -1.3
PCGF3-212ENST00000488032 GJD4Q96KN9 370 aaPredicted RBP6.91□□□□□ -1.3
PCGF3-212ENST00000488032 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
PCGF3-212ENST00000488032 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
PCGF3-212ENST00000488032 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.3
PCGF3-212ENST00000488032 UBTFP17480 764 aaKnown RBP6.9□□□□□ -1.3
PCGF3-212ENST00000488032 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.3
PCGF3-212ENST00000488032 NDUFB9Q9Y6M9 179 aa6.9□□□□□ -1.3
PCGF3-212ENST00000488032 NR6A1Q15406 480 aa6.89□□□□□ -1.31
PCGF3-212ENST00000488032 TRIM34Q9BYJ4 488 aa6.89□□□□□ -1.31
PCGF3-212ENST00000488032 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
PCGF3-212ENST00000488032 ZC3H4Q9UPT8 1303 aaKnown RBP6.89□□□□□ -1.31
PCGF3-212ENST00000488032 ZBTB24O43167 697 aaPredicted RBP6.88□□□□□ -1.31
PCGF3-212ENST00000488032 RAD21O60216 631 aa6.88□□□□□ -1.31
PCGF3-212ENST00000488032 RPIAP49247 311 aa6.88□□□□□ -1.31
PCGF3-212ENST00000488032 NBPF14Q5TI25 921 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms